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The Permuted Congruential Generator (PCG) extends the Linear Congruential Generator (LCG) with a permutation function to increase output randomness while retaining speed, simplicity, and conciseness.
This is a simple C++ library that facilitates parsing command line arguments in a type independent manner.
Magic Enum offers static reflection of enums, with conversions to and from strings, iteration and related functionality.
xsimd provides a unified means for using SIMD features for library authors. Namely, it enables manipulation of batches of numbers with the same arithmetic operators as for single values. It also provides accelerated implementation of common mathematical functions operating on batches.
xsimd provides a unified means for using SIMD features for library authors. Namely, it enables manipulation of batches of numbers with the same arithmetic operators as for single values. It also provides accelerated implementation of common mathematical functions operating on batches.
The Clipper library performs line & polygon clipping - intersection, union, difference & exclusive-or, and line & polygon offsetting. The library is based on Vatti's clipping algorithm.Note: This package is a major update of the original clipper library.
Highway is a performance-portable, length-agnostic C++ library for SIMD (Single Instruction, Multiple Data) with runtime dispatch.
cpp-httplib is a C++11 single-file cross platform blocking HTTP/HTTPS library, easy to setup. It can also be used as a single-header library.
GNU Cppi processes C source code files to properly indent the preprocessor directives to reflect their nesting. It also performs other standardizations, such as correcting the number of spaces between directives and the text following them.
This package provides a number of methods for creating and augmenting Latin Hypercube Samples.
iheatmapr is an R package for building complex, interactive heatmaps using modular building blocks. "Complex" heatmaps are heatmaps in which subplots along the rows or columns of the main heatmap add more information about each row or column. For example, a one column additional heatmap may indicate what group a particular row or column belongs to. Complex heatmaps may also include multiple side by side heatmaps which show different types of data for the same conditions. Interactivity can improve complex heatmaps by providing tooltips with information about each cell and enabling zooming into interesting features. iheatmapr uses the plotly library for interactivity.
This package computes various confidence intervals (CI) for the Kaplan-Meier estimator, namely: Petos CI, Rothman CI, CIs based on Greenwoods variance, Thomas and Grunkemeier CI and the simultaneous confidence bands by Nair and Hall and Wellner.
This package implements multitaper spectral estimation techniques using prolate spheroidal sequences (Slepians) and sine tapers for time series analysis. It includes an adaptive weighted multitaper spectral estimate, a coherence estimate, Thomson's Harmonic F-test, and complex demodulation. The Slepians sequences are generated efficiently using a tridiagonal matrix solution, and jackknifed confidence intervals are available for most estimates.
This package provides utilities for processing the parameters of various statistical models. Beyond computing p values, CIs, and other indices for a wide variety of models, this package implements features like standardization or bootstrapping of parameters and models, feature reduction (feature extraction and variable selection) as well as conversion between indices of effect size.
This package was previously an R wrapper of the ARPACK library, and now a shell of the R package RSpectra, an R interface to the Spectra library for solving large scale eigenvalue/vector problems. The current version of rARPACK simply imports and exports the functions provided by RSpectra. New users of rARPACK are advised to switch to the RSpectra package.
This package contains functions to implement the methodology and considerations laid out by Marks et al. in the article "Measuring abnormality in high dimensional spaces: applications in biomechanical gait analysis". Using high-dimensional datasets to measure a subject's overall level of abnormality as compared to a reference population is often needed in outcomes research.
The Datasaurus Dozen is a set of datasets with the same summary statistics. They retain the same summary statistics despite having radically different distributions. The datasets represent a larger and quirkier object lesson that is typically taught via Anscombe's Quartet (available in the 'datasets' package). Anscombe's Quartet contains four very different distributions with the same summary statistics and as such highlights the value of visualisation in understanding data, over and above summary statistics. As well as being an engaging variant on the Quartet, the data is generated in a novel way. The simulated annealing process used to derive datasets from the original Datasaurus is detailed in "Same Stats, Different Graphs: Generating Datasets with Varied Appearance and Identical Statistics through Simulated Annealing" doi:10.1145/3025453.3025912.
This package helps you create plots of p-values using single SNP and/or haplotype data. Main features of the package include options to display a linkage disequilibrium (LD) plot and the ability to plot multiple datasets simultaneously. Plots can be created using global and/or individual haplotype p-values along with single SNP p-values. Images are created as either PDF/EPS files.
This package lets you estimate fixed effects binary choice models (logit and probit) with potentially many individual fixed effects and compute average partial effects. Incidental parameter bias can be reduced with an asymptotic bias correction proposed by Fernandez-Val (2009) <doi:10.1016/j.jeconom.2009.02.007>.
Dunn's test computes stochastic dominance & reports pairwise comparisons. This is done following a Kruskal-Wallis test (Kruskal and Wallis, 1952). It employs Dunn's z-test-statistic approximations for rank statistics, conducting k(k-1)/2 comparisons. The null hypothesis assumes that the probability of a randomly selected value from the first group being larger than one from the second group is one half, similar to the Wilcoxon-Mann-Whitney test. Dunn's test serves as a test for median difference and takes into account tied ranks.
This package provides tools for depth functions methodology applied to multivariate analysis. Besides allowing calculation of depth values and depth-based location estimators, the package includes functions or drawing contour plots and perspective plots of depth functions. Euclidean and spherical depths are supported.
This package provides functions that implement the known population median test.
This package provides functions to compute the distribution function of quadratic forms in normal variables using Imhof's method, Davies's algorithm, Farebrother's algorithm or Liu et al.'s algorithm.
The ggplot2 package provides a strong API for sequentially building up a plot, but does not concern itself with composition of multiple plots. Patchwork is a package that expands the API to allow for arbitrarily complex composition of plots by providing mathematical operators for combining multiple plots.