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      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


python-mffpy 0.10.0
Propagated dependencies: python-deprecated@1.2.14 python-lxml@6.0.1 python-numpy@1.26.4 python-pytz@2025.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/BEL-Public/mffpy
Licenses: ASL 2.0
Synopsis: Reader and Writer for Philips' MFF file format
Description:

mffpy is a lean reader for EGI's MFF file format. These files are directories containing several files of mostly xml files, but also binary files.

python-tensorpac 0.6.5-1.ac9058f
Propagated dependencies: python-joblib@1.5.1 python-matplotlib@3.8.2 python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: http://etiennecmb.github.io/tensorpac/
Licenses: Modified BSD
Synopsis: Tensor-based Phase-Amplitude Coupling
Description:

Tensor-based Phase-Amplitude Coupling.

python-bycycle 1.2.0
Propagated dependencies: python-matplotlib@3.8.2 python-neurodsp@2.3.0 python-numpy@1.26.4 python-pandas@2.2.3 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://bycycle-tools.github.io/
Licenses: ASL 2.0
Synopsis: Cycle-by-cycle analyses of neural oscillations
Description:

bycycle is a tool for quantifying features of neural oscillations in the time domain, as opposed to the frequency domain, using a cycle-by-cycle approach.

python-wfdb 4.3.0
Propagated dependencies: python-aiohttp@3.11.11 python-fsspec@2025.9.0 python-matplotlib@3.8.2 python-numpy@1.26.4 python-pandas@2.2.3 python-requests@2.32.5 python-scipy@1.12.0 python-soundfile@0.13.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://wfdb.readthedocs.io
Licenses: Expat
Synopsis: Tools for reading, writing, and processing physiologic signals and annotations
Description:

A Python-native package for reading, writing, processing, and plotting physiologic signal and annotation data. The core I/O functionality is based on the Waveform Database (WFDB) specifications.

python-autoreject 0.4.3
Propagated dependencies: python-h5io@0.2.5 python-joblib@1.5.1 python-matplotlib@3.8.2 python-mne@1.10.2 python-numpy@1.26.4 python-pymatreader@1.1.0 python-scikit-learn@1.7.0 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: http://autoreject.github.io
Licenses: Modified BSD
Synopsis: Automated rejection and repair of epochs in M/EEG
Description:

This is a library to automatically reject bad trials and repair bad sensors in magneto-/electroencephalography (M/EEG) data.

python-probeinterface 0.3.0
Propagated dependencies: python-numpy@1.26.4 python-packaging@25.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/SpikeInterface/probeinterface
Licenses: Expat
Synopsis: Python package to handle probe layout, geometry and wiring to device.
Description:

A Python package to handle the layout, geometry, and wiring of silicon probes for extracellular electrophysiology experiments.

python-nixio 1.5.4
Propagated dependencies: python-h5py@3.13.0 python-numpy@1.26.4 python-six@1.17.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/G-Node/nixpy
Licenses: Modified BSD
Synopsis: Python implementation of the NIX data model
Description:

The NIX data model allows to store fully annotated scientific dataset, i.e. the data together with its metadata within the same container. The current implementations store the actual data using the HDF5 file format as a storage backend.

python-alphacsc 0.4.1
Propagated dependencies: python-joblib@1.5.1 python-matplotlib@3.8.2 python-mne@1.10.2 python-numba@0.61.0 python-numpy@1.26.4 python-scikit-learn@1.7.0 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://alphacsc.github.io/
Licenses: Modified BSD
Synopsis: Convolutional dictionary learning for noisy signals
Description:

This is a library to perform shift-invariant sparse dictionary learning, also known as convolutional sparse coding (CSC), on time-series data.

python-antropy 0.1.9
Propagated dependencies: python-numba@0.61.0 python-numpy@1.26.4 python-scikit-learn@1.7.0 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://raphaelvallat.com/antropy
Licenses: Modified BSD
Synopsis: Entropy and complexity of (EEG) time-series in Python
Description:

AntroPy is a Python package providing several time-efficient algorithms for computing the complexity of time-series. It can be used for example to extract features from EEG signals.

python-pynwb 3.1.2
Propagated dependencies: python-dateutil@2.9.0 python-h5py@3.13.0 python-hdmf@4.1.2 python-numpy@1.26.4 python-pandas@2.2.3 python-platformdirs@4.3.6
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pynwb.readthedocs.io
Licenses: Modified BSD
Synopsis: Package for working with Neurodata stored in the NWB format
Description:

PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format.

python-snirf 0.8.0
Propagated dependencies: python-colorama@0.4.6 python-h5py@3.13.0 python-numpy@1.26.4 python-termcolor@2.5.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/BUNPC/pysnirf2
Licenses: GPL 3
Synopsis: Interface and validator for SNIRF files
Description:

Python library for reading, writing, and validating SNIRF files

python-lspopt 1.4.0
Propagated dependencies: python-numpy@1.26.4 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/hbldh/lspopt
Licenses: Expat
Synopsis: Multitaper window method for estimating Wigner spectra for certain locally stationary processes
Description:

This package provides a Python implementation of a multitaper window method for estimating Wigner spectra for certain locally stationary processes.

meggie 1.10.0
Propagated dependencies: python-appdirs@1.4.4 python-colorama@0.4.6 python-h5io@0.2.5 python-json-logger@2.0.7 python-matplotlib@3.8.2 python-mne@1.10.2 python-mne-qt-browser@0.7.2 python-numpy@1.26.4 python-pandas@2.2.3 python-pyqt@5.15.11 python-scikit-learn@1.7.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://cibr-jyu.github.io/meggie
Licenses: Modified BSD
Synopsis: User-friendly graphical user interface to do M/EEG analysis
Description:

Meggie is an open-source software designed for intuitive MEG and EEG analysis. With its user-friendly graphical interface, Meggie brings the powerful analysis methods of MNE-Python to researchers without requiring programming skills.

openmeeg 2.5.15
Dependencies: hdf5@1.14.6 matio@1.5.23 openblas@0.3.30 vtk@9.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://openmeeg.github.io
Licenses: CeCILL-B
Synopsis: Forward problems solver in the field of EEG and MEG
Description:

The OpenMEEG software is a C++ package for solving the forward problems of electroencephalography (EEG) and magnetoencephalography (MEG).

python-meegkit 0.1.9
Propagated dependencies: python-joblib@1.5.1 python-matplotlib@3.8.2 python-numpy@1.26.4 python-pandas@2.2.3 python-pyriemann@0.9 python-scikit-learn@1.7.0 python-scipy@1.12.0 python-statsmodels@0.14.4 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://nbara.github.io/python-meegkit
Licenses: Modified BSD
Synopsis: M/EEG denoising in Python
Description:

This package provides denoising tools for M/EEG processing in Python.

python-mne-rsa 0.10
Propagated dependencies: python-mne@1.10.2 python-nibabel@5.3.2 python-pyside-6@6.9.2 python-pyvista@0.44.2 python-pyvistaqt@0.11.3 python-scikit-learn@1.7.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mne.tools/mne-rsa
Licenses: Modified BSD
Synopsis: Representational Similarity Analysis on MEG and EEG data
Description:

This is a Python package for performing representational similarity analysis (RSA) using MNE-Python data structures. The main use-case is to perform RSA using a “searchlight” approach through time and/or a volumetric or surface source space.

python-pyedflib 0.1.42
Propagated dependencies: python-numpy@1.26.4
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pyedflib.readthedocs.io
Licenses: Modified BSD
Synopsis: Library to read/write EDF+/BDF+ files
Description:

pyEDFlib is a Python library to read/write EDF+/BDF+ files based on EDFlib. EDF means European Data Format

python-pycrostates 0.6.1
Propagated dependencies: python-decorator@5.2.1 python-jinja2@3.1.2 python-joblib@1.5.1 python-matplotlib@3.8.2 python-mne@1.10.2 python-numpy@1.26.4 python-packaging@25.0 python-pooch@1.8.1 python-psutil@7.0.0 python-scikit-learn@1.7.0 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pycrostates.readthedocs.io
Licenses: Modified BSD
Synopsis: Python package for EEG microstate segmentation
Description:

This package provides a simple open source Python package for EEG microstate segmentation.

python-antio 0.6.1
Propagated dependencies: python-click@8.1.8 python-numpy@1.26.4 python-packaging@25.0 python-psutil@7.0.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/mscheltienne/antio
Licenses: GPL 3
Synopsis: I/O library for the CNT format from ANT Neuro
Description:

This package provides I/O functions for the CNT format from ANT Neuro.

python-nwbinspector 0.6.5
Propagated dependencies: python-aiohttp@3.11.11 python-click@8.1.8 python-fsspec@2025.9.0 python-hdmf-zarr@0.12.0 python-isodate@0.7.2 python-jsonschema@4.23.0 python-natsort@8.4.0 python-packaging@25.0 python-pynwb@3.1.2 python-pyyaml@6.0.2 python-requests@2.32.5 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://nwbinspector.readthedocs.io/
Licenses: Modified BSD
Synopsis: Inspect NWB files for compliance with NWB Best Practices
Description:

This inspector is meant as a companion to the PyNWB validator, which checks for strict schema compliance. This tool attempts to apply some common sense to find components of the file that are technically compliant, but possibly incorrect, suboptimal in their representation, or deviate from best practices.

python-nwb2bids 0.6.0
Propagated dependencies: python-pandas@2.2.3 python-pydantic@2.10.4 python-pynwb@3.1.2 python-rich-click@1.8.9 python-ruamel.yaml@0.18.14 python-typing-extensions@4.15.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://nwb2bids.readthedocs.io/
Licenses: Expat
Synopsis: Reorganize NWB files into a BIDS directory layout
Description:

nwb2bids reorganizes NWB files into a BIDS directory layout.

Features:

  • Automatically renames NWB files and their directories to conform to BIDS conventions.

  • Extracts relevant metadata from NWB files to populate BIDS sidecar TSV & JSON files.

  • Currently supports BEP32 (micro-electrode electrophysiology) data types, such as extracellular (ecephys) and intracellular (icephys) electrophysiology, as well as associated behavioral events.

python-pybv 0.7.6
Propagated dependencies: python-numpy@1.26.4
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pybv.readthedocs.io
Licenses: Modified BSD
Synopsis: I/O utility for the BrainVision data format
Description:

pybv is a lightweight I/O utility for the BrainVision data format. The BrainVision data format is a recommended data format for use in the Brain Imaging Data Structure.

python-mne-features 0.3
Propagated dependencies: python-mne@1.10.2 python-numba@0.61.0 python-numpy@1.26.4 python-pandas@2.2.3 python-pywavelets@1.8.0 python-scikit-learn@1.7.0 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mne.tools/mne-features
Licenses: Modified BSD
Synopsis: Software for extracting features from multivariate time series
Description:

This package provides code for feature extraction with M/EEG data.

mnelab 1.0.5
Propagated dependencies: python-edfio@0.4.10 python-matplotlib@3.8.2 python-mne@1.10.2 python-numpy@1.26.4 python-pybv@0.7.6 python-pyside-6@6.9.2 python-pyxdf@1.17.1 python-scipy@1.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/cbrnr/mnelab
Licenses: Modified BSD
Synopsis: A graphical user interface for MNE
Description:

MNELAB is a GUI for MNE-Python, a Python package for EEG/MEG analysis.

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