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This package provides David Scott's ASH routines ported from S-PLUS to R.
This package produces a smooth estimate of the hazard function for censored data.
This is software accompanying the book 'Applied Smoothing Techniques for Data Analysis---The Kernel Approach with S-Plus Illustrations', Oxford University Press. It provides smoothing methods for nonparametric regression and density estimation
Online data collection tools like Google Forms often export multiple-response questions with data concatenated in cells. The concat.split (cSplit) family of functions provided by this package splits such data into separate cells. This package also includes functions to stack groups of columns and to reshape wide data, even when the data are "unbalanced"---something which reshape (from base R) does not handle, and which melt and dcast from reshape2 do not easily handle.
Calculate generalized R-squared, partial R-squared, and partial correlation coefficients for generalized linear (mixed) models (including quasi models with well defined variance functions).
This package lets you fit beta regression and zero-or-one inflated beta regression and obtain Bayesian inference of the model via the Markov Chain Monte Carlo approach implemented in JAGS.
spacetime provides classes and methods for spatio-temporal data, including space-time regular lattices, sparse lattices, irregular data, and trajectories; utility functions for plotting data as map sequences (lattice or animation) or multiple time series; methods for spatial and temporal matching or aggregation, retrieving coordinates, print, summary, etc.
This package provides statistical models of biased sampling in the form of univariate and multivariate noncentral hypergeometric distributions, including Wallenius' noncentral hypergeometric distribution and Fisher's noncentral hypergeometric distribution (also called extended hypergeometric distribution).
This package provides procedures for fitting a principal curve to a data matrix in arbitrary dimensions.
Ggdag is built on top of dagitty, an R package that uses the DAGitty web tool for creating and analyzing DAGs. ggdag makes it easy to tidy and plot dagitty objects using ggplot2 and ggraph, as well as common analytic and graphical functions, such as determining adjustment sets and node relationships.
This package provides a set of simple functions that transforms longitudinal data to estimate the cosinor linear model as described in Tong (1976). Methods are given to summarize the mean, amplitude and acrophase, to predict the mean annual outcome value, and to test the coefficients.
This package provides a collection of clean R Markdown HTML document templates using classless CSS styles. These documents use a minimal set of dependencies but still look great, making them suitable for use a package vignettes or for sharing results via email.
This package provides empirical likelihood ratio tests for means/quantiles/hazards from possibly censored and/or truncated data. It also does regression.
This package provides functions to extract commonly used fragmentation metrics to quantify time accumulation strategies based on minute level actigraphy-measured activity counts data.
This package provides a suite of flexible and versatile model fitting and after-fitting functions for the analysis of dose-response data.
r-kmer is an R package for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning.
This package lets you import Excel files into R. It supports .xls via the embedded libxls C library and .xlsx via the embedded RapidXML C++ library.
This package provides an interface to Amazon Web Services storage services, including Simple Storage Service (S3).
The aim of httr is to provide a wrapper for RCurl customised to the demands of modern web APIs. It provides useful tools for working with HTTP organised by HTTP verbs (GET(), POST(), etc). Configuration functions make it easy to control additional request components.
This package provides tools for regression subset selection, including exhaustive search.
This package provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.
This package provides functions for applying a wide range of fisheries stock assessment methods.
Perform common useful JavaScript operations in Shiny apps that will greatly improve your apps without having to know any JavaScript. Examples include: hiding an element, disabling an input, resetting an input back to its original value, delaying code execution by a few seconds, and many more useful functions for both the end user and the developer. Shinyjs can also be used to easily call your own custom JavaScript functions from R.
This package provides RStudio addins and R functions that make copy-pasting vectors and tables to text painless.