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This package provides an R interface to the jExcel library to create web-based interactive tables and spreadsheets compatible with spreadsheet software.
This package provides functions for Bayesian A/B testing including prior elicitation options based on Kass and Vaidyanathan (1992) doi:10.1111/j.2517-6161.1992.tb01868.x.
Circular Statistics, from "Topics in Circular Statistics" (2001) S. Rao Jammalamadaka and A. SenGupta, World Scientific.
This package enables construction of continuous and non-contiguous area cartograms.
OOMPA offers R packages for gene expression and proteomics analysis. OOMPA uses S4 classes to construct object-oriented tools with a consistent user interface. All higher level analysis tools in OOMPA are compatible with the eSet classes defined in BioConductor. The lower level processing tools offer an alternative to parts of BioConductor, but can also be used to enhance existing BioConductor packages.
This package provides tools to export R data as LaTeX and HTML tables.
This package provides a set of predicates and assertions for checking the properties of strings. This is mainly for use by other package developers who want to include run-time testing features in their own packages.
There are three main goals to the vctrs package:
To propose
vec_size()andvec_type()as alternatives tolength()andclass(). These definitions are paired with a framework for type-coercion and size-recycling.To define type- and size-stability as desirable function properties, use them to analyse existing base function, and to propose better alternatives. This work has been particularly motivated by thinking about the ideal properties of
c(),ifelse(), andrbind().To provide a new
vctrbase class that makes it easy to create new S3 vectors.vctrsprovides methods for many base generics in terms of a few newvctrsgenerics, making implementation considerably simpler and more robust.
This package provides a set of predicates and assertions for checking the properties of US-specific complex data types. This is mainly for use by other package developers who want to include run-time testing features in their own packages.
This package provides functions for Meta-analysis Burden Test, Sequence Kernel Association Test (SKAT) and Optimal SKAT (SKAT-O) by Lee et al. (2013) <doi:10.1016/j.ajhg.2013.05.010>. These methods use summary-level score statistics to carry out gene-based meta-analysis for rare variants.
This package provides binning and plotting functions for hexagonal bins. It uses and relies on grid graphics and formal (S4) classes and methods.
This is a package for computation and visualization of simple, multiple and joint correspondence analysis.
colorout is an R package that colorizes R output when running in terminal emulator.
R STDOUT is parsed and numbers, negative numbers, dates in the standard format, strings, and R constants are identified and wrapped by special ANSI scape codes that are interpreted by terminal emulators as commands to colorize the output. R STDERR is also parsed to identify the expressions warning and error and their translations to many languages. If these expressions are found, the output is colorized accordingly; otherwise, it is colorized as STDERROR (blue, by default).
You can customize the colors according to your taste, guided by the color table made by the command show256Colors(). You can also set the colors to any arbitrary string. In this case, it is up to you to set valid values.
This is a package for variable elimination (Gaussian elimination, Fourier-Motzkin elimination), Moore-Penrose pseudoinverse, reduction to reduced row echelon form, value substitution, projecting a vector on the convex polytope described by a system of (in)equations, simplify systems by removing spurious columns and rows and collapse implied equalities, test if a matrix is totally unimodular, compute variable ranges implied by linear (in)equalities.
This package computes exact conditional p-values and quantiles using an implementation of the Shift-Algorithm by Streitberg & Roehmel.
Designed for simplicity, a mirai evaluates an R expression asynchronously in a parallel process, locally or distributed over the network. The result is automatically available upon completion. Modern networking and concurrency, built on nanonext and NNG (Nanomsg Next Gen), ensures reliable and efficient scheduling over fast inter-process communications or TCP/IP secured by TLS. Distributed computing can launch remote resources via SSH or cluster managers. An inherently queued architecture handles many more tasks than available processes, and requires no storage on the file system. Innovative features include support for otherwise non-exportable reference objects, event-driven promises, and asynchronous parallel map.
Magrittr provides a mechanism for chaining commands with a new forward-pipe operator, %>%. This operator will forward a value, or the result of an expression, into the next function call/expression. There is flexible support for the type of right-hand side expressions. For more information, see package vignette. To quote Rene Magritte, "Ceci n'est pas un pipe."
This package provides a dependency management toolkit for R. Using renv, you can create and manage project-local R libraries, save the state of these libraries to a lockfile, and later restore your library as required. Together, these tools can help make your projects more isolated, portable, and reproducible.
Archimax copulas are a mixture of Archimedean and EV copulas. This package provides definitions of several parametric families of generator and dependence function, computes CDF and PDF, estimates parameters, tests for goodness of fit, generates random sample and checks copula properties for custom constructs. In the 2-dimensional case explicit formulas for density are used, contrary to higher dimensions when all derivatives are linearly approximated. Several non-archimax families (normal, FGM, Plackett) are provided as well.
This package provides a computationally stable approach of fitting a Gaussian Process (GP) model to a deterministic simulator.
This package provides functions and an RStudio add-in that search a BibTeX or BibLaTeX file to create and insert formatted Markdown citations into the current document.
This package provides a tool to provide an easy, intuitive and consistent access to information contained in various R models, like model formulas, model terms, information about random effects, data that was used to fit the model or data from response variables. The package mainly revolves around two types of functions: Functions that find (the names of) information, starting with find_, and functions that get the underlying data, starting with get_. The package has a consistent syntax and works with many different model objects, where otherwise functions to access these information are missing.
R-hub uses GitHub Actions to run R CMD check and similar package checks. The rhub package helps you set up R-hub for your R package, and start running checks.
Recipes is an extensible framework to create and preprocess design matrices. Recipes consist of one or more data manipulation and analysis "steps". Statistical parameters for the steps can be estimated from an initial data set and then applied to other data sets. The resulting design matrices can then be used as inputs into statistical or machine learning models.