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This package lets you compute the median ranking according to Kemeny's axiomatic approach. Rankings can or cannot contain ties, rankings can be both complete or incomplete. The package contains both branch-and-bound algorithms and heuristic solutions recently proposed. The searching space of the solution can either be restricted to the universe of the permutations or unrestricted to all possible ties. The package also provides some useful utilities for deal with preference rankings, including both element-weight Kemeny distance and correlation coefficient.
This package provides alternative implementations of some base R functions, including sort, order, and match. The functions are simplified but can be faster or have other advantages.
This package extends shinydashboard with AdminLTE2 components. AdminLTE2 is a Bootstrap 3 dashboard template. Customize boxes, add timelines and a lot more.
This package provides miscellaneous functions to help customize ggplot2 objects. High-level functions are provided to post-process ggplot2 layouts and allow alignment between plot panels, as well as setting panel sizes to fixed values. Other functions include a custom geom, and helper functions to enforce symmetric scales or add tags to facetted plots.
This package provides simple, flexible assertions on data.frame or data.table objects with verbose output for vetting. While other assertion packages apply towards more general use-cases, assertable is tailored towards tabular data. It includes functions to check variable names and values, whether the dataset contains all combinations of a given set of unique identifiers, and whether it is a certain length. In addition, assertable includes utility functions to check the existence of target files and to efficiently import multiple tabular data files into one data.table.
This package implements several Approximate Bayesian Computation (ABC) algorithms for performing parameter estimation, model selection, and goodness-of-fit. Cross-validation tools are also available for measuring the accuracy of ABC estimates, and to calculate the misclassification probabilities of different models.
This package lets you interface to Nocedal et al. L-BFGS-B.3.0 limited memory BFGS minimizer with bounds on parameters. This registers a R compatible C interface to L-BFGS-B.3.0 that uses the same function types and optimization as the optim() function. This package also adds more stopping criteria as well as allowing the adjustment of more tolerances.
This package provides several methods for performing permutation tests. It has three main functions, to perform linear permutation tests. These tests are tests where the test statistic is the sum of the product of a covariate (usually group indicator) and the scores.
This package provides an implementation of dimensionality reduction via regression using Kernel Ridge Regression.
The sqldf function is typically passed a single argument which is an SQL select statement where the table names are ordinary R data frame names. sqldf transparently sets up a database, imports the data frames into that database, performs the SQL statement and returns the result using a heuristic to determine which class to assign to each column of the returned data frame. The sqldf or read.csv.sql functions can also be used to read filtered files into R even if the original files are larger than R itself can handle.
This package provides a ggplot2 extension for implementing parliament charts and several other useful visualizations.
This package provides functions to impute using random forest. It operates under full conditional specifications (multivariate imputation by chained equations).
This package estimates previously compiled regression models using the rstan package, which provides the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the customary R syntax with a formula and data.frame plus some additional arguments for priors.
This package provides useful tools for both users and developers of packages for fitting Bayesian models or working with output from Bayesian models. The primary goals of the package are to:
Efficiently convert between many different useful formats of draws (samples) from posterior or prior distributions.
Provide consistent methods for operations commonly performed on draws, for example, subsetting, binding, or mutating draws.
Provide various summaries of draws in convenient formats.
Provide lightweight implementations of state of the art posterior inference diagnostics.
The ROI is a framework for handling optimization problems in R.
This package lets you download Google fonts and generate CSS to use in rmarkdown documents and Shiny applications. Some popular fonts are included and ready to use.
This package provides various methods for MRI tissue classification.
This package aims to provide the most useful subset of Boost libraries for template use among CRAN packages.
This package provides a replacement for the extract function from the raster package that is suitable for extracting raster values using sf polygons.
This is an R package for spell checking common document formats including LaTeX, markdown, manual pages, and DESCRIPTION files. It includes utilities to automate checking of documentation and vignettes as a unit test during R CMD check. Both British and American English are supported out of the box and other languages can be added. In addition, packages may define a wordlist to allow custom terminology without having to abuse punctuation.
This package is an implementation of extensions to Freund and Schapire's AdaBoost algorithm and Friedman's gradient boosting machine. It includes regression methods for least squares, absolute loss, t-distribution loss, quantile regression, logistic, multinomial logistic, Poisson, Cox proportional hazards partial likelihood, AdaBoost exponential loss, Huberized hinge loss, and Learning to Rank measures (LambdaMart).
This is a lightweight package for computing different kinds of correlations. These correlations include partial correlations, Bayesian correlations, multilevel correlations, polychoric correlations, biweight correlations, distance correlations and more.
This package is a port of the S+ "Robust Library". It provides methods for robust statistics, notably for robust regression and robust multivariate analysis.
This is a subset of the spatstat package, containing its functionality for spatial data on a linear network.