FSL is a comprehensive library of analysis tools for FMRI, MRI and diffusion brain imaging data.

This meta-package provides all the FSL modules.

Basisfield is a tool within the FSL (FMRIB Software Library) used to model and correct B0 field inhomogeneities in MRI images, which can cause geometric distortions. It is essential for improving image quality and precision in both clinical and research applications.

FAST4 is an automated segmentation tool in FSL that segments brain images into different tissue types and corrects for bias field inhomogeneities.

Tool within FSL for identifying and analyzing clusters in neuroimaging data, particularly useful for statistical thresholding and inference.

Module within FSL that provides advanced functionalities for simulating MRI data, including pulse sequence generation, signal generation, noise addition, and image reconstruction.

This package is a set of utilities libraries all FSL modules

A library that implement miscellaneous mathematicals methods.

This package is a build dependency of all FSL modules.

A wrapper that encapsulates the CEPHES Cmath library.

The bet2 module in FSL is a brain extraction tool that removes non-brain tissue from MRI images, aiding in isolating the brain for further analysis.

libgdc is a module within FSL that provides essential graphical or data handling functionalities, with its source code available on GitLab.

The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

The Gurobi Optimizer is a commercial optimization solver for linear programming (LP), quadratic programming (QP), quadratically constrained programming (QCP), mixed integer linear programming (MILP), mixed-integer quadratic programming (MIQP), and mixed-integer quadratically constrained programming (MIQCP). See here for more info: https://www.gurobi.com/documentation/9.0/quickstart_linux/cs_python.html.

StarPU is a run-time system that offers support for heterogeneous multicore machines. While many efforts are devoted to design efficient computation kernels for those architectures (e.g. to implement BLAS kernels on GPUs), StarPU not only takes care of offloading such kernels (and implementing data coherency across the machine), but it also makes sure the kernels are executed as efficiently as possible.

OpenFabrics Interfaces (OFI) is a framework focused on exporting fabric communication services to applications. OFI is best described as a collection of libraries and applications used to export fabric services. The key components of OFI are: application interfaces, provider libraries, kernel services, daemons, and test applications.

Libfabric is a core component of OFI. It is the library that defines and exports the user-space API of OFI, and is typically the only software that applications deal with directly. It works in conjunction with provider libraries, which are often integrated directly into libfabric.

This package is low-level user-level Intel's communications interface. The PSM2 API is a high-performance vendor-specific protocol that provides a low-level communications interface for the Intel Omni-Path family of high-speed networking devices.

This package provides headers of the HFI1 Linux driver.

TensorPipe provides a tensor-aware channel to transfer rich objects from one process to another while using the fastest transport for the tensors contained therein.