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This package implements an algorithm to effortlessly split a column in an R data frame filled with multiple values separated by delimiters. This automates the process of creating separate columns for each unique value, transforming them into binary outcomes.
Profiles a data frame with minimal input: column type inference, missing-value analysis, distributional summary statistics (including skewness and kurtosis), normality tests, outlier detection, correlation and categorical-association analysis, date-column profiling, grouped comparisons and an overall data-quality score, alongside a set of ggplot2 visualisations. A single entry point, profile_data(), returns a structured S3 object holding metadata, statistics, diagnostics and plots, with print(), summary() and plot() methods, and report() renders the whole profile to a self-contained HTML file. Statistical methods include the Shapiro-Wilk normality test as implemented by Royston (1995) <doi:10.2307/2986146> and the Anderson-Darling test following Stephens (1974) <doi:10.1080/01621459.1974.10480196>, with power comparisons of these tests in Yap and Sim (2011) <doi:10.1080/00949655.2010.520163>, and the categorical association measure of Cramer (1946, ISBN:9780691080048).
Gives you the ability to use arbitrary Docker images (including custom ones) to process Rmarkdown code chunks.
This package provides friendly wrappers for creating duckdb'-backed connections to tabular datasets ('csv', parquet, etc) on local or remote file systems. This mimics the behaviour of "open_dataset" in the arrow package, but in addition to S3 file system also generalizes to any list of http URLs.
Various functions to import, verify, process and plot high-resolution dendrometer data using daily and stem-cycle approaches as described in Deslauriers et al, 2007 <doi:10.1016/j.dendro.2007.05.003>. For more details about the package please see: Van der Maaten et al. 2016 <doi:10.1016/j.dendro.2016.06.001>.
Set of shiny'-based RStudio add-ins for interactively creating datasets through graphical interfaces. Users can adjust graphical elements to define data generation parameters, and the resulting datasets can be saved to temporary RDS files for further analysis or visualization. Methods are described in: Chang et al. (2024) <https://CRAN.R-project.org/package=shiny>; Bostock et al. (2011) <doi:10.1109/TVCG.2011.185>.
Calculate adjusted means and proportions of a variable by groups defined by another variable by direct standardisation, standardised to the structure of the dataset.
Implement download buttons in HTML output from rmarkdown without the need for runtime:shiny'.
Discrete factor analysis for dependent Poisson and negative binomial models with truncation, zero inflation, and zero inflated truncation.
The truncated factor model is a statistical model designed to handle specific data structures in data analysis. DTFM is a powerful tool designed to efficiently process and analyze distributed datasets. The philosophy of the package is described in Guo et al. (2023) <doi:10.1007/s00180-022-01270-z>.
Adds section-aware roadmap footers to Reveal.js slide decks created with Quarto or R Markdown'. The footer highlights completed, current, and upcoming sections as slides advance. Supports multiple visual styles, inherited section tags, roadmap-free slides, and configurable colors, size, and positioning options.
Implementation of selected Tidyverse functions within DataSHIELD', an open-source federated analysis solution in R. Currently, DataSHIELD contains very limited tools for data manipulation, so the aim of this package is to improve the researcher experience by implementing essential functions for data manipulation, including subsetting, filtering, grouping, and renaming variables. This is the client-side package which should be installed locally, and is used in conjunction with the server-side package dsTidyverse which is installed on the remote server holding the data. For more information, see <https://tidyverse.org/> and <https://datashield.org/>.
Four global value chain (GVC) decompositions are implemented. The Leontief decomposition derives the value added origin of exports by country and industry as in Hummels, Ishii and Yi (2001). The Koopman, Wang and Wei (2014) decomposition splits country-level exports into 9 value added components, and the Wang, Wei and Zhu (2013) decomposition splits bilateral exports into 16 value added components. The Borin and Mancini (2019) decomposition splits country-, sector- or bilateral-level exports into up to 13 value added and GVC components. Various GVC indicators based on these decompositions are computed in the complimentary gvc package. --- References: --- Hummels, D., Ishii, J., & Yi, K. M. (2001). The nature and growth of vertical specialization in world trade. Journal of international Economics, 54(1), 75-96. Koopman, R., Wang, Z., & Wei, S. J. (2014). Tracing value-added and double counting in gross exports. American Economic Review, 104(2), 459-94. Wang, Z., Wei, S. J., & Zhu, K. (2013). Quantifying international production sharing at the bilateral and sector levels (No. w19677). National Bureau of Economic Research. Borin, A., & Mancini, M. (2019). Measuring What Matters in Global Value Chains and Value-Added Trade. World Bank Policy Research Working Paper 8804.
This package provides constrained triangulation of polygons. Ear cutting (or ear clipping) applies constrained triangulation by successively cutting triangles from a polygon defined by path/s. Holes are supported by introducing a bridge segment between polygon paths. This package wraps the header-only library earcut.hpp <https://github.com/mapbox/earcut.hpp> which includes a reference to the method used by Held, M. (2001) <doi:10.1007/s00453-001-0028-4>.
The DWD provides gridded radar data for Germany in binary format. dwdradar reads these files and enables a fast conversion into numerical format.
This package provides functions to run the CRM and TITE-CRM in phase I trials and calibration tools for trial planning purposes.
Estimates the local average treatment effect (LATE) and the local average treatment effect on the treated (LATT) using observational data with a binary instrument, implementing the complete estimator suite of Sloczynski, Uysal, and Wooldridge: the doubly robust estimators of Sloczynski, Uysal, and Wooldridge (2022) <doi:10.48550/arXiv.2208.01300> -- inverse probability weighted regression adjustment (IPWRA), inverse probability weighting (IPW), augmented inverse probability weighting (AIPW), and regression adjustment (RA) -- and the Abadie-kappa weighting estimators of Sloczynski, Uysal, and Wooldridge (2025) <doi:10.1080/07350015.2024.2332763>. Supports linear, logistic, probit, Poisson, and fractional (fractional-logit and fractional-probit) outcome and treatment models, and instrument propensity scores estimated by maximum likelihood, covariate balancing (CBPS), or inverse probability tilting (IPT). Standard errors are computed jointly for all estimation stages by stacking the moment conditions of every model into a single M-estimation system; weak-instrument-robust Fieller confidence sets, cluster-aware bootstrap inference, design diagnostics, and a doubly robust Hausman-type test of unconfoundedness are included. Estimates and standard errors are validated against the authors Stata commands drlate (Statistical Software Components S459708) and kappalate (S459257).
An interactive editor built on rhandsontable to allow the interactive viewing, entering, filtering and editing of data in R <https://dillonhammill.github.io/DataEditR/>.
This package provides a framework for the replicable removal of personally identifiable data (PID) in data sets. The package implements a suite of methods to suit different data types based on the suggestions of Garfinkel (2015) <doi:10.6028/NIST.IR.8053> and the ICO "Guidelines on Anonymization" (2012) <https://ico.org.uk/media/1061/anonymisation-code.pdf>.
This package provides a systematic biology tool was developed to repurpose drugs via a drug-drug functional similarity network. DrugSim2DR first predict drug-drug functional similarity in the context of specific disease, and then using the similarity constructed a weighted drug similarity network. Finally, it used a network propagation algorithm on the network to identify drugs with significant target abnormalities as candidate drugs.
This package provides a tool to sample data with the desired properties.Samples can be drawn by purposive sampling with determining distributional conditions, such as deviation from normality (skewness and kurtosis), and sample size in quantitative research studies. For purposive sampling, a researcher has something in mind and participants that fit the purpose of the study are included (Etikan,Musa, & Alkassim, 2015) <doi:10.11648/j.ajtas.20160501.11>.Purposive sampling can be useful for answering many research questions (Klar & Leeper, 2019) <doi:10.1002/9781119083771.ch21>.
Dataset containing information about job listings for data science job roles.
This package implements survival proximity score matching in multi-state survival models. Includes tools for simulating survival data and estimating transition-specific coxph models with frailty terms. The primary methodological work on multistate censored data modeling using propensity score matching has been published by Bhattacharjee et al.(2024) <doi:10.1038/s41598-024-54149-y>.
There are many different formats dates are commonly represented with: the order of day, month, or year can differ, different separators ("-", "/", or whitespace) can be used, months can be numerical, names, or abbreviations and year given as two digits or four. datefixR takes dates in all these different formats and converts them to R's built-in date class. If datefixR cannot standardize a date, such as because it is too malformed, then the user is told which date cannot be standardized and the corresponding ID for the row. datefixR also allows the imputation of missing days and months with user-controlled behavior.