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Estimates the Gini index and computes variances and confidence intervals for finite and infinite populations, using different methods; also computes Gini index for continuous probability distributions, draws samples from continuous probability distributions with Gini indices set by the user; uses Rcpp'. References: Muñoz et al. (2023) <doi:10.1177/00491241231176847>. à lvarez et al. (2021) <doi:10.3390/math9243252>. Giorgi and Gigliarano (2017) <doi:10.1111/joes.12185>. Langel and Tillé (2013) <doi:10.1111/j.1467-985X.2012.01048.x>.
The geographical complexity of individual variables can be characterized by the differences in local attribute variables, while the common geographical complexity of multiple variables can be represented by fluctuations in the similarity of vectors composed of multiple variables. In spatial regression tasks, the goodness of fit can be improved by incorporating a geographical complexity representation vector during modeling, using a geographical complexity-weighted spatial weight matrix, or employing local geographical complexity kernel density. Similarly, in spatial sampling tasks, samples can be selected more effectively by using a method that weights based on geographical complexity. By optimizing performance in spatial regression and spatial sampling tasks, the spatial bias of the model can be effectively reduced.
Density, distribution function, quantile function and random generation for the bimodal skew symmetric normal distribution of Hassan and El-Bassiouni (2016) <doi:10.1080/03610926.2014.882950>.
Fits the logistic equation to microbial growth curve data (e.g., repeated absorbance measurements taken from a plate reader over time). From this fit, a variety of metrics are provided, including the maximum growth rate, the doubling time, the carrying capacity, the area under the logistic curve, and the time to the inflection point. Method described in Sprouffske and Wagner (2016) <doi:10.1186/s12859-016-1016-7>.
Extends ggplot2 functionality to the partykit package. ggparty provides the necessary tools to create clearly structured and highly customizable visualizations for tree-objects of the class party'.
The ggplot2 package provides a powerful set of tools for visualising and investigating data. The ggsoccer package provides a set of functions for elegantly displaying and exploring soccer event data with ggplot2'. Providing extensible layers and themes, it is designed to work smoothly with a variety of popular sports data providers.
Supply implementation to model generalized multivariate functional data using Bayesian additive mixed models of R package bamlss via a latent Gaussian process (see Umlauf, Klein, Zeileis (2018) <doi:10.1080/10618600.2017.1407325>).
R's sf package ships with self-contained GDAL executables, including a bare bones interface to several GDAL'-related utility programs collectively known as the GDAL utilities'. For each of those utilities, this package provides an R wrapper whose formal arguments closely mirror those of the GDAL command line interface. The utilities operate on data stored in files and typically write their output to other files. Therefore, to process data stored in any of R's more common spatial formats (i.e. those supported by the sf and terra packages), first write them to disk, then process them with the package's wrapper functions before reading the outputted results back into R. GDAL function arguments introduced in GDAL version 3.5.2 or earlier are supported.
Create Primavera-style interactive Gantt charts with Work Breakdown Structure (WBS) hierarchy and activities. Features include color-coded WBS items, indented labels, scrollable views for large projects, dynamic date formatting, and the ability to dim past activities. Built on top of plotly for interactive visualizations.
Make it easy to create simplified trial summary (TS) domain based on FDA FDA guide <https://github.com/TuCai/phuse/blob/master/inst/examples/07_genTS/www/Simplified_TS_Creation_Guide_v2.pdf>.
Group method of data handling (GMDH) - type neural network algorithm is the heuristic self-organization method for modelling the complex systems. In this package, GMDH-type neural network algorithms are applied to make short term forecasting for a univariate time series.
Generalized Order-Restricted Information Criterion (GORIC) value for a set of hypotheses in multivariate linear models and generalised linear models.
This package provides tools to download data from the GISCO (Geographic Information System of the Commission) Eurostat database <https://ec.europa.eu/eurostat/web/gisco>. Global and European map data available. This package is in no way officially related to or endorsed by Eurostat.
This package provides methods for fitting macroevolutionary models to phylogenetic trees Pennell (2014) <doi:10.1093/bioinformatics/btu181>.
This package provides a set of geometries to make line plots a little bit nicer. Use along with ggplot2 to: - Improve the clarity of line plots with many overlapping lines - Draw more realistic worms.
Uses several types of indicator saturation and automated General-to-Specific (GETS) modelling from the gets package and applies it to panel data. This allows the detection of structural breaks in panel data, operationalising a reverse causal approach of causal inference, see Pretis and Schwarz (2022) <doi:10.2139/ssrn.4022745>.
This package provides a general, flexible framework for estimating parameters and empirical sandwich variance estimator from a set of unbiased estimating equations (i.e., M-estimation in the vein of Stefanski & Boos (2002) <doi:10.1198/000313002753631330>). All examples from Stefanski & Boos (2002) are published in the corresponding Journal of Statistical Software paper "The Calculus of M-Estimation in R with geex" by Saul & Hudgens (2020) <doi:10.18637/jss.v092.i02>. Also provides an API to compute finite-sample variance corrections.
Four graph-based tests are provided for testing whether two samples are from the same distribution. It works for both continuous data and discrete data.
Build Open Geospatial Consortium GeoPackage files (<https://www.geopackage.org/>). GDAL utilities for reading and writing spatial data are provided by the terra package. Additional GeoPackage and SQLite features for attributes and tabular data are implemented with the RSQLite package.
Easily explore data by plotting graphs with a few lines of code. Use these ggplot() wrappers to quickly draw graphs of scatter/dots with box-whiskers, violins or SD error bars, data distributions, before-after graphs, factorial ANOVA and more. Customise graphs in many ways, for example, by choosing from colour blind-friendly palettes (12 discreet, 3 continuous and 2 divergent palettes). Use the simple code for ANOVA as ordinary (lm()) or mixed-effects linear models (lmer()), including randomised-block or repeated-measures designs, and fit non-linear outcomes as a generalised additive model (gam) using mgcv(). Obtain estimated marginal means and perform post-hoc comparisons on fitted models (via emmeans()). Also includes small datasets for practising code and teaching basics before users move on to more complex designs. See vignettes for details on usage <https://grafify.shenoylab.com/>. Citation: <doi:10.5281/zenodo.5136508>.
This package implements a flexible nonlinear modelling framework for nonstationary generalized extreme value analysis in hydroclimatology following Cannon (2010) <doi:10.1002/hyp.7506>.
This package provides a Gaussian or Student's t copula-based procedure for generating samples from discrete random variables with prescribed correlation matrix and marginal distributions.
Offers a generalization of the scatterplot matrix based on the recognition that most datasets include both categorical and quantitative information. Traditional grids of scatterplots often obscure important features of the data when one or more variables are categorical but coded as numerical. The generalized pairs plot offers a range of displays of paired combinations of categorical and quantitative variables. Emerson et al. (2013) <DOI:10.1080/10618600.2012.694762>.
Improved version of GRIN software that streamlines its use in practice to analyze genomic lesion data, accelerate its computing, and expand its analysis capabilities to answer additional scientific questions including a rigorous evaluation of the association of genomic lesions with RNA expression. Pounds, Stan, et al. (2013) <DOI:10.1093/bioinformatics/btt372>.