_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


ocaml4.07-lwt 5.5.0
Dependencies: glib@2.83.3
Propagated dependencies: ocaml4.07-mmap@1.2.0 ocaml4.07-ocplib-endian@1.2 ocaml4.07-result@1.5 ocaml4.07-seq@0.1 libev@4.33
Channel: gn-bioinformatics
Location: gn/packages/ocaml.scm (gn packages ocaml)
Home page: https://github.com/ocsigen/lwt
Licenses: LGPL 2.1
Build system: dune
Synopsis: Cooperative threads and I/O in monadic style
Description:

Lwt provides typed, composable cooperative threads. These make it easy to run normally-blocking I/O operations concurrently in a single process. Also, in many cases, Lwt threads can interact without the need for locks or other synchronization primitives.

ocaml4.07-gsl 1.19.3
Dependencies: gsl@2.8
Channel: gn-bioinformatics
Location: gn/packages/ocaml.scm (gn packages ocaml)
Home page: https://mmottl.github.io/gsl-ocaml
Licenses: GPL 3+
Build system: ocaml
Synopsis: Bindings to the GNU Scientific Library
Description:

GSL-OCaml is an interface to the GNU scientific library (GSL) for the OCaml language.

openfyba 4.1.1
Dependencies: zip@3.0 autoconf@2.69 automake@1.17 libtool@2.4.7 libgcrypt@1.11.0
Channel: gn-bioinformatics
Location: gn/packages/openfyba.scm (gn packages openfyba)
Home page: http://labs.kartverket.no/sos/
Licenses: GPL 2
Build system: gnu
Synopsis: source code release of the FYBA library
Description:

OpenFYBA is the source code release of the FYBA library.

perl-time-parsedate 2015.103
Channel: gn-bioinformatics
Location: gn/packages/perl.scm (gn packages perl)
Home page: http://search.cpan.org/dist/Time-ParseDate
Licenses:
Build system: perl
Synopsis: Parse and format time values
Description:

ParseDate

logtodo 1.0.5-acda8f2
Propagated dependencies: perl-time-parsedate@2015.103
Channel: gn-bioinformatics
Location: gn/packages/perl.scm (gn packages perl)
Home page: https://gitlab.com/pjotrp/logtodo
Licenses: GPL 2+
Build system: perl
Synopsis: Pjotr's time logger
Description:

None

r-phewas 0.0.0-1
Propagated dependencies: r@4.5.2 r-data-table@1.17.8 r-fgsea@1.4.1 r-intermediate@0.2-4 r-limma@3.66.0 r-mlmm@0.1.0 r-qvalue@2.42.0
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: None
Licenses: GPL 2+
Build system: trivial
Synopsis: None
Description:

None.

r-intermediate 0.2-4
Dependencies: r-ggplot2@4.0.1 r-magrittr@2.0.4 r-plotly@4.11.0 r-htmlwidgets@1.6.4 r-testthat@3.3.0
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: https://github.com/simecek/intermediate
Licenses: GPL 3
Build system: r
Synopsis: R/intermediate
Description:

R package for eQTl/pQTL mediation analysis.

r-qvalue-old 2.8.0
Propagated dependencies: r-reshape2@1.4.5 r-ggplot2@4.0.1
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: http://bioconductor.org/packages/qvalue
Licenses: Expat
Build system: r
Synopsis:
Description:

.

r-fastmatch 1.1-0
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: http://www.rforge.net/fastmatch
Licenses: GPL 2
Build system: r
Synopsis: Fast match() function
Description:

Package providing a fast match() replacement for cases that require repeated look-ups. It is slightly faster that R's built-in match() function on first match against a table, but extremely fast on any subsequent lookup as it keeps the hash table in memory.

r-fgsea 1.4.1
Propagated dependencies: r-rcpp@1.1.0 r-data-table@1.17.8 r-biocparallel@1.44.0 r-ggplot2@4.0.1 r-gridextra@2.3 r-fastmatch@1.1-0
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: http://bioconductor.org/packages/fgsea
Licenses: Expat
Build system: r
Synopsis:
Description:

.

r-mlmm 0.1.0
Channel: gn-bioinformatics
Location: gn/packages/phewas.scm (gn packages phewas)
Home page: https://github.com/Gregor-Mendel-Institute/mlmm
Licenses: GPL 3
Build system: r
Synopsis: R/mlmm
Description:

Implements an efficient multi-locus mixed-model approach for genome-wide association studies in structured populations.

ecl-qc 20220331-4.a0d8c80
Dependencies: ecl-alexandria@1.4-0.009b7e5 ecl-split-sequence@2.0.1
Channel: gn-bioinformatics
Location: gn/packages/quality-control.scm (gn packages quality-control)
Home page: https://git.genenetwork.org/jgart/qc/
Licenses: Unlicense
Build system: asdf/ecl
Synopsis: Quality control of delimited files
Description:

cl-qc is a Common Lisp library for linting the following in delimited text files:

  • Whitespace

  • Floating-point number well-formedness

  • GeneChip Platform ID checks for Affymetrix, Illumina, and others

sbcl-qc 20220331-4.a0d8c80
Dependencies: sbcl-alexandria@1.4-0.009b7e5 sbcl-split-sequence@2.0.1
Channel: gn-bioinformatics
Location: gn/packages/quality-control.scm (gn packages quality-control)
Home page: https://git.genenetwork.org/jgart/qc/
Licenses: Unlicense
Build system: asdf/sbcl
Synopsis: Quality control of delimited files
Description:

cl-qc is a Common Lisp library for linting the following in delimited text files:

  • Whitespace

  • Floating-point number well-formedness

  • GeneChip Platform ID checks for Affymetrix, Illumina, and others

genenetwork-qc 0.0.1-2.b735cae
Dependencies: python-mypy@1.16.1 python-pylint@3.3.8 python-pytest@8.4.1 python-hypothesis@6.135.26
Propagated dependencies: redis@7.2.6 mariadb@10.11.14 gunicorn@22.0.0 python-redis@5.2.0 python-flask@3.1.0 python-jsonpickle@4.0.0 python-mysqlclient@2.2.7
Channel: gn-bioinformatics
Location: gn/packages/quality-control.scm (gn packages quality-control)
Home page: https://git.genenetwork.org/fredmanglis/gnqc_py
Licenses: AGPL 3+
Build system: python
Synopsis: GeneNetwork Quality Control Application
Description:

GeneNetwork qc is a quality control application for the data files that eventually are used to add to the data in the GeneNetwork project.

cl-qc 20220331-4.a0d8c80
Propagated dependencies: cl-alexandria@1.4-0.009b7e5 cl-split-sequence@2.0.1 cl-1am@0.0-1.8b1da94
Channel: gn-bioinformatics
Location: gn/packages/quality-control.scm (gn packages quality-control)
Home page: https://git.genenetwork.org/jgart/qc/
Licenses: Unlicense
Build system: asdf/source
Synopsis: Quality control of delimited files
Description:

cl-qc is a Common Lisp library for linting the following in delimited text files:

  • Whitespace

  • Floating-point number well-formedness

  • GeneChip Platform ID checks for Affymetrix, Illumina, and others

libcsv b1d5212831842ee5869d99bc208a21837e4037d5
Channel: gn-bioinformatics
Location: gn/packages/quality-control.scm (gn packages quality-control)
Home page: https://github.com/rgamble/libcsv
Licenses: LGPL 2.1+
Build system: gnu
Synopsis: CSV library written in pure ANSI C
Description:

CSV library written in pure ANSI C that can read and write CSV data.

atomic-queue 1.0-1.7d75e9e
Channel: gn-bioinformatics
Location: gn/packages/riscv.scm (gn packages riscv)
Home page: https://github.com/max0x7ba/atomic_queue
Licenses: Expat
Build system: meson
Synopsis: C++ lockless queue
Description:

This package contains a C++11 multiple-producer-multiple-consumer lockless queues header library based on circular buffer with std::atomic.

cva6 4.2.0-1.b40bb32
Dependencies: spike@1.1.0 verilator@4.110
Channel: gn-bioinformatics
Location: gn/packages/riscv.scm (gn packages riscv)
Home page: https://docs.openhwgroup.org/projects/cva6-user-manual/
Licenses: ASL 2.0 Modified BSD
Build system: gnu
Synopsis: Application class 6-stage RISC-V CPU
Description:

CVA6 is a 6-stage, single issue, in-order CPU which implements the 64-bit RISC-V instruction set. It fully implements I, M, A and C extensions as specified in Volume I: User-Level ISA V 2.3 as well as the draft privilege extension 1.10. It implements three privilege levels M, S, U to fully support a Unix-like operating system. Furthermore it is compliant to the draft external debug spec 0.13.

It has configurable size, separate TLBs, a hardware PTW and branch-prediction (branch target buffer and branch history table). The primary design goal was on reducing critical path length.

ruby-descendants-tracker 0.0.4
Propagated dependencies: ruby-thread-safe@0.3.6
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://github.com/dkubb/descendants_tracker
Licenses: Expat
Build system: ruby
Synopsis: Module that adds descendant tracking to a class
Description:

Module that adds descendant tracking to a class

ruby-rocco 0.8.2
Propagated dependencies: ruby-mustache@1.1.1 ruby-redcarpet@3.5.0
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://rtomayko.github.com/rocco/
Licenses: Expat
Build system: ruby
Synopsis: Docco in Ruby
Description:

Docco in Ruby

ruby-rails-multisite 2.0.7
Propagated dependencies: ruby-activerecord@7.2.2.1 ruby-railties@7.2.2.1
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://github.com/discourse/rails_multisite
Licenses: Expat
Build system: ruby
Synopsis: Multi tenancy support for Rails
Description:

This gem provides multi-db support for Rails applications. Using its middleware you can partition your app so each hostname has its own db. It provides a series of helper for working with multiple database, and some additional rails tasks for working with them.

ruby-rswag-specs 2.4.0
Propagated dependencies: ruby-activesupport@7.2.2.1 ruby-json-schema@2.8.1 ruby-railties@7.2.2.1
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://github.com/rswag/rswag
Licenses: Expat
Build system: ruby
Synopsis: Simplify API integration testing with a succinct rspec DSL and generate OpenAPI specification files directly from your rspecs. More about the OpenAPI initiative here: http://spec.openapis.org/
Description:

Simplify API integration testing with a succinct rspec DSL and generate OpenAPI specification files directly from your rspecs. More about the OpenAPI initiative here: http://spec.openapis.org/

ruby-ember-data-source 3.0.2
Propagated dependencies: ruby-ember-source@2.18.2
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://github.com/emberjs/data
Licenses: Expat
Build system: ruby
Synopsis: ember-data source code wrapper for use with Ruby libs.
Description:

ember-data source code wrapper for use with Ruby libs.

Total results: 573