globus-cli provides a command-line interface to Globus APIs.

GeneNetwork proxy manages authorization/access control

Gnulib is a central location for common GNU code, intended to be shared among GNU packages.

guile-dbi is a library for Guile that provides a convenient interface to SQL databases. Database programming with guile-dbi is generic in that the same programming interface is presented regardless of which database system is used. It currently supports MySQL, Postgres and SQLite3.

Genenetwork monitoring tool

guile-dbi is a library for Guile that provides a convenient interface to SQL databases. This package implements the interface for MySQL.

Use of guile.

Helm is a tool for managing Kubernetes charts. Charts are packages of pre-configured Kubernetes resources. Use Helm to:

1. Find and use popular software packaged as Helm charts to run in Kubernetes

2. Share your own applications as Helm charts

3. Create reproducible builds of your Kubernetes applications

4. Intelligently manage your Kubernetes manifest files

5. Manage releases of Helm packages

HyPhy is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It features a complete graphical user interface (GUI) and a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments (via message passing interface (MPI)) and it can be compiled as a shared library and called from other programming environments such as Python and R.

JSch is a pure Java implementation of SSH2. JSch allows you to connect to an sshd server and use port forwarding, X11 forwarding, file transfer, etc., and you can integrate its functionality into your own Java programs.

Commons VFS provides a single API for accessing various different file systems. It presents a uniform view of the files from various different sources, such as the files on local disk, on an HTTP server, or inside a Zip archive.

Apache Ivy is a popular dependency manager focusing on flexibility and simplicity.

RTG Tools is a subset of RTG Core that includes several useful utilities for dealing with VCF files and sequence data. Probably the most interesting is the vcfeval command which performs sophisticated comparison of VCF files.

Apache Maven is a software project management and comprehension tool. Based on the concept of a project object model (POM), Maven can manage a project's build, reporting and documentation from a central piece of information.

The Jakarta-ORO Java classes are a set of text-processing Java classes that provide Perl5 compatible regular expressions, AWK-like regular expressions, glob expressions, and utility classes for performing substitutions, splits, filtering filenames, etc.

This aims to be a complete implementation of XZ data compression in pure Java. Single-threaded streamed compression and decompression and random access decompression have been fully implemented.

UIkit is a lightweight and modular front-end framework for developing fast and powerful web interfaces.

This package provides a plugin for the Marked Markdown parser that adds syntax highlighting support for fenced code blocks.

chroma.js is a small-ish zero-dependency JavaScript library for all kinds of color conversions and color scales. chroma.js can also help you generate nice colors using various methods, for instance to be used in color palette for maps or data visualization.

Inspired by twitter.com's autocomplete search functionality, typeahead.js is a flexible JavaScript library that provides a strong foundation for building robust typeaheads. The typeahead.js library consists of 2 components: the suggestion engine, Bloodhound, and the UI view, Typeahead. The suggestion engine is responsible for computing suggestions for a given query. The UI view is responsible for rendering suggestions and handling DOM interactions. Both components can be used separately, but when used together, they can provide a rich typeahead experience.

Smart Time Ago is a little jQuery library to update the relative timestamps in your document intelligently. (e.g "3 hours ago").

CKEditor is a proven, enterprise-grade WYSIWYG HTML editor with wide browser compatibility, including legacy browsers.

1. Paste from Word and Excel, spell check, accessibility checker, tables.

2. Autocomplete, mentions, widgets, code snippets, emoji plugins.

3. Full control over content: HTML filtering, view source mode.

4. Great accessibility: WCAG 2.0 AA and Section 508 compliant.

5. Long-term support (LTS) until 2023.

The Buttons extension for DataTables provides a common set of options, API methods and styling to display buttons on a page that will interact with a DataTable. It also provides plug-ins for file export (HTML5 and Flash), print view and column visibility. Other libraries, such as Editor and Select also provide buttons specific to their use cases.