_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-acnr 1.0.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mpierrejean/acnr
Licenses: LGPL 2.1+
Build system: r
Synopsis: Annotated copy-number regions
Description:

This package provides SNP array data from different types of copy-number regions. These regions were identified manually by the authors of the package and may be used to generate realistic data sets with known truth.

r-rbamtools 2.16.17
Dependencies: zlib@1.3.1
Propagated dependencies: r-refgenome@1.7.7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/rbamtools
Licenses: Artistic License 2.0
Build system: r
Synopsis: Read and write BAM (binary alignment) files
Description:

This package provides an R interface to functions of the SAMtools library.

r-readxl 1.4.5
Propagated dependencies: r-cellranger@1.1.0 r-cpp11@0.5.2 r-progress@1.2.3 r-tibble@3.3.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://readxl.tidyverse.org
Licenses: GPL 3 FreeBSD Boost 1.0
Build system: r
Synopsis: Read Excel files
Description:

This package lets you import Excel files into R. It supports .xls via the embedded libxls C library and .xlsx via the embedded RapidXML C++ library.

r-checkmate 2.3.3
Propagated dependencies: r-backports@1.5.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mllg/checkmate
Licenses: Modified BSD
Build system: r
Synopsis: Fast and versatile argument checks
Description:

This package provides tests and assertions to perform frequent argument checks. A substantial part of the package was written in C to minimize any worries about execution time overhead.

r-gprofiler2 0.2.4
Propagated dependencies: r-crosstalk@1.2.2 r-curl@7.0.0 r-dplyr@1.1.4 r-ggplot2@4.0.1 r-gridextra@2.3 r-jsonlite@2.0.0 r-plotly@4.11.0 r-rcurl@1.98-1.17 r-tidyr@1.3.1 r-viridislite@0.4.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/gprofiler2/
Licenses: GPL 2+
Build system: r
Synopsis: Interface to the g:Profiler toolset
Description:

This package provides a toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via g:Profiler. The main tools are:

  1. g:GOSt, functional enrichment analysis and visualization of gene lists;

  2. g:Convert, gene/protein/transcript identifier conversion across various namespaces;

  3. g:Orth, orthology search across species;

  4. g:SNPense, mapping SNP rs identifiers to chromosome positions, genes and variant effects.

This package is an R interface corresponding to the 2019 update of g:Profiler and provides access to versions e94_eg41_p11 and higher.

r-foreign 0.8-90
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/foreign
Licenses: GPL 2+
Build system: r
Synopsis: Read data stored by other statistics software
Description:

This package provides functions for reading and writing data stored by some versions of Epi Info, Minitab, S, SAS, SPSS, Stata, Systat and Weka and for reading and writing some dBase files.

r-r2html 2.3.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/nalimilan/R2HTML
Licenses: GPL 2+
Build system: r
Synopsis: HTML export for R objects
Description:

This package includes HTML functions and methods to write in an HTML file. Thus, making HTML reports is easy. It includes a function that allows redirection on the fly, which appears to be very useful for teaching purposes, as the student can keep a copy of the produced output to keep all that they did during the course. The package comes with a vignette describing how to write HTML reports for statistical analysis. Finally, a driver for Sweave parses HTML flat files containing R code and to automatically write the corresponding outputs (tables and graphs).

r-tree 1.0-45
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/tree/
Licenses: GPL 2+
Build system: r
Synopsis: Classification and regression trees
Description:

This package provides procedures to work with classification and regression trees.

r-optimx 2025-4.9
Propagated dependencies: r-nloptr@2.2.1 r-numderiv@2016.8-1.1 r-pracma@2.4.6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/optimx/
Licenses: GPL 2
Build system: r
Synopsis: Expanded replacement and extension of the optim function
Description:

This package provides a replacement and extension of the optim function to call to several function minimization codes in R in a single statement. These methods handle smooth, possibly box constrained functions of several or many parameters. Note that the function optimr was prepared to simplify the incorporation of minimization codes going forward. This package also implements some utility codes and some extra solvers, including safeguarded Newton methods. Many methods previously separate are now included here.

r-drr 0.0.4
Propagated dependencies: r-cvst@0.2-3 r-kernlab@0.9-33 r-matrix@1.7-4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/DRR
Licenses: GPL 3
Build system: r
Synopsis: Dimensionality reduction via regression
Description:

This package provides an implementation of dimensionality reduction via regression using Kernel Ridge Regression.

r-pracma 2.4.6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/pracma/
Licenses: GPL 3+
Build system: r
Synopsis: Practical numerical math functions
Description:

This package provides functions for numerical analysis and linear algebra, numerical optimization, differential equations, plus some special functions. It uses Matlab function names where appropriate to simplify porting.

r-invgamma 1.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/dkahle/invgamma
Licenses: GPL 2
Build system: r
Synopsis: Inverse gamma distribution
Description:

This package provides a light weight implementation of the standard distribution functions for the inverse gamma distribution, wrapping those for the gamma distribution in the stats package.

r-lsei 1.3-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.stat.auckland.ac.nz/~yongwang
Licenses: GPL 2+
Build system: r
Synopsis: Solve regression problems under equality/inequality constraints
Description:

It contains functions that solve least squares linear regression problems under linear equality/inequality constraints. Functions for solving quadratic programming problems are also available, which transform such problems into least squares ones first.

r-spatstat-random 3.4-3
Propagated dependencies: r-spatstat-data@3.1-9 r-spatstat-geom@3.6-1 r-spatstat-univar@3.1-5 r-spatstat-utils@3.2-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://spatstat.org/
Licenses: GPL 2+
Build system: r
Synopsis: Random Generation Functionality for the 'spatstat' Family
Description:

This package provides functionality for random generation of spatial data in the spatstat family of packages. It generates random spatial patterns of points according to many simple rules (complete spatial randomness, Poisson, binomial, random grid, systematic, cell), randomised alteration of patterns (thinning, random shift, jittering), simulated realisations of random point processes (simple sequential inhibition, Matern inhibition models, Matern cluster process, Neyman-Scott cluster processes, log-Gaussian Cox processes, product shot noise cluster processes) and simulation of Gibbs point processes (Metropolis-Hastings birth-death-shift algorithm, alternating Gibbs sampler).

r-googlesheets 0.3.0
Propagated dependencies: r-cellranger@1.1.0 r-dplyr@1.1.4 r-httr@1.4.7 r-jsonlite@2.0.0 r-purrr@1.2.0 r-readr@2.1.6 r-stringr@1.6.0 r-tibble@3.3.0 r-tidyr@1.3.1 r-xml2@1.5.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/jennybc/googlesheets
Licenses: Expat
Build system: r
Synopsis: Manage Google spreadsheets from R
Description:

This package provides tools to interact with Google Sheets from within R.

r-mime 0.13
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yihui/mime
Licenses: GPL 2
Build system: r
Synopsis: R package to map filenames to MIME types
Description:

This package guesses the MIME type from a filename extension using the data derived from /etc/mime.types in UNIX-type systems.

r-shinyhelper 0.3.2
Propagated dependencies: r-markdown@2.0 r-shiny@1.11.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=shinyhelper
Licenses: GPL 3
Build system: r
Synopsis: Easily add Markdown help files to shiny app elements
Description:

This package creates a lightweight way to add markdown helpfiles to Shiny apps, using modal dialog boxes, with no need to observe each help button separately.

r-gistr 0.9.0
Propagated dependencies: r-assertthat@0.2.1 r-crul@1.6.0 r-dplyr@1.1.4 r-httr@1.4.7 r-jsonlite@2.0.0 r-knitr@1.50 r-magrittr@2.0.4 r-rmarkdown@2.30
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/ropensci/gistr
Licenses: Expat
Build system: r
Synopsis: Work with Gists in browser
Description:

This package allows the user to create new Github gists, update gists with new files, rename files, delete files, get and delete gists, star and un-star them, fork them, open a gist in your default browser, get an embed code for a gist, list gist commits, and get rate limit information when authenticated.

r-sccore 1.0.6
Propagated dependencies: r-dplyr@1.1.4 r-ggplot2@4.0.1 r-ggrepel@0.9.6 r-igraph@2.2.1 r-irlba@2.3.5.1 r-magrittr@2.0.4 r-matrix@1.7-4 r-pbmcapply@1.5.1 r-proc@1.19.0.1 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-rcppeigen@0.3.4.0.2 r-rcppprogress@0.4.2 r-rlang@1.1.6 r-scales@1.4.0 r-seurat@5.3.1 r-tibble@3.3.0 r-uwot@0.2.4 r-withr@3.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/kharchenkolab/sccore
Licenses: GPL 3
Build system: r
Synopsis: Core utilities for single-cell RNA-Seq
Description:

This package implements core utilities for single-cell RNA-seq data analysis. Contained within are utility functions for working with DE matrices and count matrices, a collection of functions for manipulating and plotting data via ggplot2, and functions to work with cell graphs and cell embeddings. Graph-based methods include embedding kNN cell graphs into a UMAP, collapsing vertices of each cluster in the graph, and propagating graph labels.

r-clisymbols 1.2.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/gaborcsardi/clisymbols
Licenses: Expat
Build system: r
Synopsis: Unicode symbols at the R prompt
Description:

This package provides a small subset of Unicode symbols, that are useful when building command line applications. They fall back to alternatives on terminals that do not support Unicode.

r-webutils 1.2.2
Propagated dependencies: r-curl@7.0.0 r-jsonlite@2.0.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/jeroen/webutils
Licenses: Expat
Build system: r
Synopsis: Utility functions for developing web applications
Description:

This package parses HTTP request data in application/json, multipart/form-data, or application/x-www-form-urlencoded format. It includes an example of hosting and parsing HTML form data in R using either httpuv or Rhttpd.

r-productplots 0.1.2
Propagated dependencies: r-ggplot2@4.0.1 r-plyr@1.8.9
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/hadley/productplots
Licenses: GPL 2
Build system: r
Synopsis: Product plots for R
Description:

Framework for visualising tables of counts, proportions and probabilities. The framework is called product plots, alluding to the computation of area as a product of height and width, and the statistical concept of generating a joint distribution from the product of conditional and marginal distributions. The framework, with extensions, is sufficient to encompass over 20 visualisations previously described in fields of statistical graphics and infovis, including bar charts, mosaic plots, treemaps, equal area plots and fluctuation diagrams.

r-swagger 5.17.14.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/rstudio/swagger
Licenses: ASL 2.0
Build system: r
Synopsis: Dynamically generate documentation from a Swagger-compliant API
Description:

This package provides a collection of HTML, JavaScript, and CSS assets that dynamically generate beautiful documentation from a Swagger compliant API.

r-gridgraphics 0.5-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/pmur002/gridgraphics
Licenses: GPL 2+
Build system: r
Synopsis: Redraw base graphics using @code{grid} graphics
Description:

This package provides functions to convert a page of plots drawn with the graphics package into identical output drawn with the grid package. The result looks like the original graphics-based plot, but consists of grid grobs and viewports that can then be manipulated with grid functions (e.g., edit grobs and revisit viewports).

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