_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-pbivnorm 0.6.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/brentonk/pbivnorm
Licenses: GPL 2+
Build system: r
Synopsis: Vectorized bivariate normal CDF
Description:

This package provides a vectorized R function for calculating probabilities from a standard bivariate normal CDF.

r-survmisc 0.5.6
Propagated dependencies: r-data-table@1.17.8 r-ggplot2@4.0.1 r-gridextra@2.3 r-km-ci@0.5-6 r-kmsurv@0.1-6 r-knitr@1.50 r-survival@3.8-3 r-xtable@1.8-4 r-zoo@1.8-14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/survMisc/
Licenses: GPL 2
Build system: r
Synopsis: Miscellaneous functions for survival data
Description:

This package provides a collection of functions to help in the analysis of right-censored survival data. These extend the methods available in the survival package.

r-seurat 5.3.1
Propagated dependencies: r-cluster@2.1.8.1 r-cowplot@1.2.0 r-fastdummies@1.7.5 r-fitdistrplus@1.2-4 r-future@1.68.0 r-future-apply@1.20.0 r-generics@0.1.4 r-ggplot2@4.0.1 r-ggrepel@0.9.6 r-ggridges@0.5.7 r-httr@1.4.7 r-ica@1.0-3 r-igraph@2.2.1 r-irlba@2.3.5.1 r-jsonlite@2.0.0 r-kernsmooth@2.23-26 r-leidenbase@0.1.35 r-lifecycle@1.0.4 r-lmtest@0.9-40 r-mass@7.3-65 r-matrix@1.7-4 r-matrixstats@1.5.0 r-miniui@0.1.2 r-patchwork@1.3.2 r-pbapply@1.7-4 r-plotly@4.11.0 r-png@0.1-8 r-progressr@0.18.0 r-rann@2.6.2 r-rcolorbrewer@1.1-3 r-rcpp@1.1.0 r-rcppannoy@0.0.22 r-rcppeigen@0.3.4.0.2 r-rcpphnsw@0.6.0 r-rcppprogress@0.4.2 r-reticulate@1.44.1 r-rlang@1.1.6 r-rocr@1.0-11 r-rspectra@0.16-2 r-rtsne@0.17 r-scales@1.4.0 r-scattermore@1.2 r-sctransform@0.4.2 r-seuratobject@5.2.0 r-shiny@1.11.1 r-spatstat-explore@3.6-0 r-spatstat-geom@3.6-1 r-tibble@3.3.0 r-uwot@0.2.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.satijalab.org/seurat
Licenses: GPL 3
Build system: r
Synopsis: Seurat is an R toolkit for single cell genomics
Description:

This package is an R package designed for QC, analysis, and exploration of single cell RNA-seq data. It easily enables widely-used analytical techniques, including the identification of highly variable genes, dimensionality reduction; PCA, ICA, t-SNE, standard unsupervised clustering algorithms; density clustering, hierarchical clustering, k-means, and the discovery of differentially expressed genes and markers.

r-feather 0.3.5
Propagated dependencies: r-hms@1.1.4 r-rcpp@1.1.0 r-tibble@3.3.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/wesm/feather
Licenses: ASL 2.0
Build system: r
Synopsis: R Bindings to the Feather API
Description:

Read and write feather files, a lightweight binary columnar data store designed for maximum speed.

r-univoutl 0.4
Propagated dependencies: r-hmisc@5.2-4 r-robustbase@0.99-6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/marcellodo/univOutl
Licenses: GPL 2+
Build system: r
Synopsis: Detection of univariate outliers
Description:

This package provides well-known outlier detection techniques in the univariate case. Methods to deal with skewed distribution are included too. The Hidiroglou-Berthelot (1986) method to search for outliers in ratios of historical data is implemented as well. When available, survey weights can be used in outliers detection.

r-rspectra 0.16-2
Propagated dependencies: r-matrix@1.7-4 r-rcpp@1.1.0 r-rcppeigen@0.3.4.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yixuan/RSpectra
Licenses: MPL 2.0
Build system: r
Synopsis: Solvers for large-scale Eigenvalue and SVD problems
Description:

This package provides an R interface to the Spectra library for large-scale eigenvalue and SVD problems. It is typically used to compute a few eigenvalues/vectors of an n by n matrix, e.g., the k largest eigenvalues, which is usually more efficient than eigen() if k << n.

r-accept 1.0.0
Propagated dependencies: r-dplyr@1.1.4 r-reldist@1.7-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/accept/
Licenses: GPL 3
Build system: r
Synopsis: Acute COPD Exacerbation Prediction Tool (ACCEPT)
Description:

This package allows clinicians to predict the rate and severity of future acute exacerbation in Chronic Obstructive Pulmonary Disease (COPD) patients, based on the clinical prediction model published in Adibi et al. (2019) doi:10.1101/651901.

r-maxlik 1.5-2.1
Propagated dependencies: r-generics@0.1.4 r-misctools@0.6-28 r-sandwich@3.1-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=maxLik
Licenses: GPL 2+
Build system: r
Synopsis: Maximum Likelihood Estimation and related tools
Description:

This package provides functions for Maximum Likelihood (ML) estimation, non-linear optimization, and related tools. It includes a unified way to call different optimizers, and classes and methods to handle the results from the Maximum Likelihood viewpoint. It also includes a number of convenience tools for testing and developing your own models.

r-rcppint64 0.0.5
Propagated dependencies: r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/eddelbuettel/rcppint64
Licenses: GPL 2+
Build system: r
Synopsis: Rcpp-based helper functions to pass Int64 values between R and C++
Description:

int64 values can be created and accessed via the bit64 package and its integer64 class which package the int64 representation cleverly into a double. The nanotime package builds on this to support nanosecond-resolution timestamps. This package helps conversions between R and C++ via several helper functions provided via a single header file. A complete example client package is included as an illustration.

r-quadprog 1.5-8
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/quadprog
Licenses: GPL 3+
Build system: r
Synopsis: Functions to solve quadratic programming problems
Description:

This package contains routines and documentation for solving quadratic programming problems.

r-tm 0.7-16
Propagated dependencies: r-bh@1.87.0-1 r-nlp@0.3-2 r-rcpp@1.1.0 r-slam@0.1-55 r-xml2@1.5.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://tm.r-forge.r-project.org/
Licenses: GPL 3
Build system: r
Synopsis: Text mining package
Description:

This package provides a framework for text mining applications within R.

r-sitar 1.5.0
Propagated dependencies: r-dplyr@1.1.4 r-forcats@1.0.1 r-ggplot2@4.0.1 r-glue@1.8.0 r-magrittr@2.0.4 r-nlme@3.1-168 r-purrr@1.2.0 r-rlang@1.1.6 r-rsample@1.3.1 r-splines2@0.5.4 r-tibble@3.3.0 r-tidyr@1.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/statist7/sitar
Licenses: GPL 2+
Build system: r
Synopsis: Super imposition by translation and rotation growth curve analysis
Description:

This package provides functions for fitting and plotting SITAR growth curve models. SITAR is a shape- invariant model with a regression B-spline mean curve and subject-specific random effects on both the measurement and age scales.

r-rmisc 1.5.1
Propagated dependencies: r-lattice@0.22-7 r-plyr@1.8.9
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/Rmisc/
Licenses: GPL 3
Build system: r
Synopsis: Ryan Miscellaneous
Description:

The Rmisc library contains functions for data analysis and utility operations.

r-afpt 1.1.0.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/MarcoKlH/afpt-r/
Licenses: GPL 3+
Build system: r
Synopsis: Tools for modelling of animal flight performance
Description:

This package allows estimation and modelling of flight costs in animal (vertebrate) flight, implementing the aerodynamic power model. Flight performance is estimated based on basic morphological measurements such as body mass, wingspan and wing area. Afpt can be used to make predictions on how animals should adjust their flight behaviour and wingbeat kinematics to varying flight conditions.

r-abbyyr 0.5.5
Propagated dependencies: r-curl@7.0.0 r-httr@1.4.7 r-plyr@1.8.9 r-progress@1.2.3 r-readr@2.1.6 r-xml@3.99-0.20
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/soodoku/abbyyR
Licenses: Expat
Build system: r
Synopsis: Access to Abbyy Optical Character Recognition (OCR) API
Description:

This package provides tools to get text from images of text using Abbyy Cloud Optical Character Recognition (OCR) API. With abbyyyR, one can easily OCR images, barcodes, forms, documents with machine readable zones, e.g. passports and get the results in a variety of formats including plain text and XML. To learn more about the Abbyy OCR API, see http://ocrsdk.com/.

r-servr 0.32
Propagated dependencies: r-httpuv@1.6.16 r-jsonlite@2.0.0 r-mime@0.13 r-xfun@0.54
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yihui/servr
Licenses: Expat
Build system: r
Synopsis: Simple HTTP server to serve static files or dynamic documents
Description:

Servr provides an HTTP server in R to serve static files, or dynamic documents that can be converted to HTML files (e.g., R Markdown) under a given directory.

r-optparse 1.7.5
Propagated dependencies: r-getopt@1.20.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/trevorld/optparse
Licenses: GPL 2+
Build system: r
Synopsis: Command line option parser
Description:

This package provides a command line parser inspired by Python's optparse library to be used with Rscript to write shebang scripts that accept short and long options.

r-reprex 2.1.1
Propagated dependencies: r-callr@3.7.6 r-cli@3.6.5 r-clipr@0.8.0 r-fs@1.6.6 r-glue@1.8.0 r-knitr@1.50 r-lifecycle@1.0.4 r-rlang@1.1.6 r-rmarkdown@2.30 r-rstudioapi@0.17.1 r-withr@3.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/tidyverse/reprex
Licenses: Expat
Build system: r
Synopsis: Prepare reproducible R code examples for sharing
Description:

This package provides a convenience wrapper that uses the rmarkdown package to render small snippets of code to target formats that include both code and output. The goal is to encourage the sharing of small, reproducible, and runnable examples on code-oriented websites or email. reprex also extracts clean, runnable R code from various common formats, such as copy/paste from an R session.

r-latticeextra 0.6-31
Propagated dependencies: r-interp@1.1-6 r-jpeg@0.1-11 r-lattice@0.22-7 r-mass@7.3-65 r-png@0.1-8 r-rcolorbrewer@1.1-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://latticeextra.r-forge.r-project.org/
Licenses: GPL 2+
Build system: r
Synopsis: Extra graphical utilities based on lattice
Description:

Building on the infrastructure provided by the lattice package, this package provides several new high-level graphics functions and methods, as well as additional utilities such as panel and axis annotation functions.

r-randomizr 1.0.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://declaredesign.org/r/randomizr/
Licenses: Expat
Build system: r
Synopsis: Tools for common forms of random assignment and sampling
Description:

This package provides tools for generating random assignments for common experimental designs and random samples for common sampling designs.

r-betareg 3.2-4
Propagated dependencies: r-flexmix@2.3-20 r-formula@1.2-5 r-lmtest@0.9-40 r-modeltools@0.2-24 r-sandwich@3.1-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://topmodels.R-Forge.R-project.org/betareg/
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Beta regression
Description:

This package implements beta regression for modeling beta-distributed dependent variables on the open unit interval (0, 1), e.g., rates and proportions, see Cribari-Neto and Zeileis (2010) <doi:10.18637/jss.v034.i02>. Moreover, extended-support beta regression models can accommodate dependent variables with boundary observations at 0 and/or 1. For the classical beta regression model, alternative specifications are provided: Bias-corrected and bias-reduced estimation, finite mixture models, and recursive partitioning for beta regression, see <doi:10.18637/jss.v048.i11>.

r-geometries 0.2.5
Propagated dependencies: r-rcpp@1.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://dcooley.github.io/geometries/
Licenses: Expat
Build system: r
Synopsis: Convert between R objects and geometric structures
Description:

Geometry shapes in R are typically represented by matrices (points, lines), with more complex shapes being lists of matrices (polygons). Geometries will convert various R objects into these shapes. Conversion functions are available at both the R level, and through Rcpp.

r-crosstalk 1.2.2
Propagated dependencies: r-htmltools@0.5.8.1 r-jsonlite@2.0.0 r-lazyeval@0.2.2 r-r6@2.6.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://rstudio.github.io/crosstalk/
Licenses: Expat
Build system: r
Synopsis: Inter-widget interactivity for HTML widgets
Description:

This package provides building blocks for allowing HTML widgets to communicate with each other, with Shiny or without (i.e., static .html files). It currently supports linked brushing and filtering.

r-dtw 1.23-1
Propagated dependencies: r-proxy@0.4-27
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://dtw.r-forge.r-project.org/
Licenses: GPL 2+
Build system: r
Synopsis: Dynamic Time Warping Algorithms
Description:

This package provides a comprehensive implementation of dynamic time warping (DTW) algorithms in R. DTW computes the optimal (least cumulative distance) alignment between points of two time series. Common DTW variants covered include local (slope) and global (window) constraints, subsequence matches, arbitrary distance definitions, normalizations, minimum variance matching, and so on.

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