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This is a package for visualizing data quality of partially accruing data.
This package allows you to render vector-based SVG images into high-quality custom-size bitmap arrays using the librsvg2 library. The resulting bitmap can be written to e.g. PNG, JPEG or WEBP format. In addition, the package can convert images directly to various formats such as PDF or PostScript.
Create and customize interactive maps using the Leaflet JavaScript library and the htmlwidgets package. These maps can be used directly from the R console, from RStudio, in Shiny applications and R Markdown documents.
This package provides a convenient tool to install and update Bioconductor packages.
This package provides an R to C/C++ interface that runs the Leiden community detection algorithm to find a basic partition. It runs the equivalent of the leidenalg find_partition() function. This package includes the required source code files from the official leidenalg distribution and functions from the R igraph package.
Download and install R packages stored in GitHub, BitBucket, or plain subversion or git repositories. This package is a lightweight replacement of the install_* functions in the devtools package. Indeed most of the code was copied over from devtools.
This package implements various procedures for finding multiple change-points. Two methods make use of dynamic programming and pruning, with no distributional assumptions other than the existence of certain absolute moments in one method. Hierarchical and exact search methods are included. All methods return the set of estimated change-points as well as other summary information.
This package implements asymptotic methods related to maximally selected statistics, with applications to single-nucleotide polymorphism (SNP) data.
This package checks adherence to a given style, syntax errors and possible semantic issues. It supports on the fly checking of R code edited with RStudio IDE, Emacs and Vim.
This is an R package for the imputation of left-censored data under a compositional approach. The implemented methods consider aspects of relevance for a compositional approach such as scale invariance, subcompositional coherence or preserving the multivariate relative structure of the data. Based on solid statistical frameworks, it comprises the ability to deal with single and varying censoring thresholds, consistent treatment of closed and non-closed data, exploratory tools, multiple imputation, Markov Chain Monte Carlo (MCMC), robust and non-parametric alternatives, and recent proposals for count data.
This package provides a Shiny app that can disconnect for a variety of reasons: an unrecoverable error occurred in the app, the server went down, the user lost internet connection, or any other reason that might cause the Shiny app to lose connection to its server. With shinydisconnect, you can call disonnectMessage anywhere in a Shiny app's UI to add a nice message when this happens. It works locally (running Shiny apps within RStudio) and on Shiny servers.
This package provides the full texts for Jane Austen's six completed novels, ready for text analysis. These novels are "Sense and Sensibility", "Pride and Prejudice", "Mansfield Park", "Emma", "Northanger Abbey", and "Persuasion".
This package provides bindings to GnuPG for working with OpenGPG (RFC4880) cryptographic methods. It includes utilities for public key encryption, creating and verifying digital signatures, and managing your local keyring. Some functionality depends on the version of GnuPG that is installed on the system.
Bivariate data interpolation on regular and irregular grids, either linear or using splines are the main part of this package. It is intended to provide replacement functions for the ACM licensed akima::interp and tripack::tri.mesh functions.
This is a package for developers to check user-supplied function arguments. It is designed to be simple, fast and customizable. Error messages follow the tidyverse style guide.
This package provides Cramer-Von Mises and Anderson-Darling tests of goodness-of-fit for continuous univariate distributions, using efficient algorithms.
This package is a collection of baseline correction algorithms. Beside those it provides a framework and a Tcl/Tk enabled GUI for optimizing baseline algorithm parameters. Typical use is the removal of the background effects from spectra, which are originating from various types of spectroscopy and spectrometry. Also, there is a possibility of optimizing this with regard to regression or classification results. Correction methods include polynomial fitting, weighted local smoothers and many more.
This package provides a set of predicates and assertions for checking the properties of US-specific complex data types. This is mainly for use by other package developers who want to include run-time testing features in their own packages.
This package contains the program ttf2pt1, for use with the extrafont package.
This package helps you to automate R package and project setup tasks that are otherwise performed manually. This includes setting up unit testing, test coverage, continuous integration, Git, GitHub integration, licenses, Rcpp, RStudio projects, and more.
This package provides other packages with access to the internal R serialization code. Access to this code is provided at the C function level by using the registration of native function mechanism. Client packages simply include a single header file RApiSerializeAPI.h provided by this package.
This package represents an implementation of functions to optimize ordering of nodes in a dendrogram, without affecting the meaning of the dendrogram. A dendrogram can be sorted based on the average distance of subtrees, or based on the smallest distance value. These sorting methods improve readability and interpretability of tree structure, especially for tasks such as comparison of different distance measures or linkage types and identification of tight clusters and outliers. As a result, it also introduces more meaningful reordering for a coupled heatmap visualization.
This package provides functions useful in the design and ANOVA of experiments. The content falls into the following groupings:
data,
factor manipulation functions,
design functions,
ANOVA functions,
matrix functions,
projector and canonical efficiency functions, and
miscellaneous functions.
There is a vignette called DesignNotes describing how to use the design functions for randomizing and assessing designs. The ANOVA functions facilitate the extraction of information when the Error function has been used in the call to aov.
The DBI package provides a database interface (DBI) definition for communication between R and relational database management systems. All classes in this package are virtual and need to be extended by the various R/DBMS implementations.