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unyt is a Python library working with data that has physical units. It defines the unyt.array.unyt_array and unyt.array.unyt_quantity classes (subclasses of NumPy’s ndarray class) for handling arrays and scalars with units,respectively
Einops provides a set of tensor operations for NumPy and multiple deep learning frameworks.
AlgoPy provides a functionality to differentiate functions implemented as computer programs by using Algorithmic Differentiation (AD) techniques in the forward and reverse mode.
The forward mode propagates univariate Taylor polynomials of arbitrary order. Hence it is also possible to use AlgoPy to evaluate higher-order derivative tensors. The reverse mode is also known as backpropagation and can be found in similar form in tools like PyTorch. Speciality of AlgoPy is the possibility to differentiate functions that contain matrix functions as +,-,*,/, dot, solve, qr, eigh, cholesky.
iminuit is a Jupyter-friendly Python interface for the Minuit2 C++ library maintained by CERN's ROOT team.
Minuit was designed to optimize statistical cost functions, for maximum-likelihood and least-squares fits. It provides the best-fit parameters and error estimates from likelihood profile analysis.
Optionally, Iminuit supports SciPy minimizers as alternatives to Minuit's MIGRAD algorithm and Numba accelerated functions.
Numpoly is a generic library for creating, manipulating and evaluating arrays of polynomials based on numpy.ndarray objects.
This package provides a set of tools and Python modules for setting up, manipulating, running, visualizing and analyzing atomistic simulations.
This package provides a stable interface for interactions between Snakemake and its software deployment plugins.
The OSQP (Operator Splitting Quadratic Program) solver is a numerical optimization package.
This package provides Numba-accelerated implementations of common SciPy probability distributions and others used in particle physics.
The supported distributions are:
Uniform
(Truncated) Normal
Log-normal
Poisson
Binomial
(Truncated) Exponential
Student's t
Voigtian
Crystal Ball
Generalised double-sided Crystal Ball
Tsallis-Hagedorn, a model for the minimum bias pT distribution
Q-Gaussian
Bernstein density (not normalized to unity)
Cruijff density (not normalized to unity)
CMS-Shape
Generalized Argus
This package provides a stable interface for interactions between Snakemake and its report plugins.
Plotnine is a Python implementation of the Grammar of Graphics. It is a powerful graphics concept for creating plots and visualizations in a structured and declarative manner. It is inspired by the R package ggplot2 and aims to provide a similar API and functionality in Python.
Trimesh is a pure Python library for loading and using triangular meshes with an emphasis on watertight surfaces. The goal of the library is to provide a full featured and well tested Trimesh object which allows for easy manipulation and analysis, in the style of the Polygon object in the Shapely library.
This package provides a domain-specific language for modeling convex optimization problems in Python.
Scikit-opt (or sko) is a Python module implementing swarm intelligence algorithms: genetic algorithm, particle swarm optimization, simulated annealing, ant colony algorithm, immune algorithm, artificial fish swarm algorithm.
Pandas is a Python package providing fast, flexible, and expressive data structures designed to make working with structured (tabular, multidimensional, potentially heterogeneous) and time series data both easy and intuitive. It aims to be the fundamental high-level building block for doing practical, real world data analysis in Python.
This package implements a functionality to tell whether two images look nearly identical. The image hash algorithms (average, perceptual, difference, wavelet) analyse the image structure on luminance (without color information). The color hash algorithm analyses the color distribution and black & gray fractions (without position information).
Features:
average hashing
perceptual hashing
difference hashing
wavelet hashing
HSV color hashing (colorhash)
crop-resistant hashing
This package provides fast computations for principal component analysis (PCA), SVD, and eigendecompositions via randomized methods
xarray_einstats provides wrappers around some NumPy and SciPy functions and around einops with an API and features adapted to xarray.
paramz is a lightweight parameterization framework for parameterized model creation and handling. Its features include:
Easy model creation with parameters.
Fast optimized access of parameters for optimization routines.
Memory efficient storage of parameters (only one copy in memory).
Renaming of parameters.
Intuitive printing of models and parameters.
Gradient saving directly inside parameters.
Gradient checking of parameters.
Optimization of parameters.
Jupyter notebook integration.
Efficient storage of models, for reloading.
Efficient caching.
Pandas 0.23 added a simple API for registering accessors with Pandas objects. Pandas-flavor extends Pandas' extension API by
adding support for registering methods as well
making each of these functions backwards compatible with older versions of Pandas
This package implements schema validation for Xarray objects.
This package provides utilities and tools for open data science including tools for accessing data sets in Python.
scikit-fem is a library for performing finite element assembly. Its main purpose is the transformation of bilinear forms into sparse matrices and linear forms into vectors.
Deepdish is a Python library to load and save HDF5 files. The primary feature of deepdish is its ability to save and load all kinds of data as HDF5. It can save any Python data structure, offering the same ease of use as pickling or numpy.save, but with the language interoperability offered by HDF5.