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spin is a simple interface for common development tasks. It comes with a few common build commands out the box, but can easily be customized per project.
The impetus behind developing the tool was the mass migration of scientific Python libraries (SciPy, scikit-image, and NumPy, etc.) to Meson, after distutils was deprecated. When many of the build and installation commands changed, it made sense to abstract away the nuisance of having to re-learn them.
pyfma provides an implementation of fused multiply-add which computes (x*y) + z with a single rounding. This is useful for dot products, matrix multiplications, polynomial evaluations (e.g., with Horner's rule), Newton's method for evaluating functions, convolutions, artificial neural networks etc.
This package provides Python tools for the Open Reflectometry Standards Organization (ORSO). It includes utilities for working with reflectometry data files and the ORSO file format.
This package provides accelerated simulations and potentials of solids.
Scikit-opt (or sko) is a Python module implementing swarm intelligence algorithms: genetic algorithm, particle swarm optimization, simulated annealing, ant colony algorithm, immune algorithm, artificial fish swarm algorithm.
This package provides a Python library for working with NeuroML descriptions of neuronal models
Baycomp is a library for Bayesian comparison of classifiers. Functions in the library compare two classifiers on one or on multiple data sets. They compute three probabilities: the probability that the first classifier has higher scores than the second, the probability that differences are within the region of practical equivalence (rope), or that the second classifier has higher scores.
This package implements a functionality to solve automatic numerical differentiation problems in one or more variables. Finite differences are used in an adaptive manner, coupled with a Richardson extrapolation methodology to provide a maximally accurate result. The user can configure many options like; changing the order of the method or the extrapolation, even allowing the user to specify whether complex-step, central, forward or backward differences are used.
Snakemake aims to reduce the complexity of creating workflows by providing a clean and modern domain specific specification language (DSL) in Python style, together with a fast and comfortable execution environment.
This is a package meant primarily for documenting histogram indexing and the PlottableHistogram Protocol and any future cross-library standards. It also contains the code for the PlottableHistogram Protocol, to be used in type checking libraries wanting to conform to the protocol. It is not usually a runtime dependency, but only a type checking, testing, and/or docs dependency in support of other libraries.
pynetdicom is a Python package that implements the DICOM networking protocol. It allows the easy creation of DICOM SCUs and SCPs.
This package provides a Python interface to the QDLDL LDL factorization routine for quasi-definite linear system.
PyZX is a Python tool implementing the theory of ZX-calculus for the creation, visualisation, and automated rewriting of large-scale quantum circuits. PyZX currently allows you to:
Read in quantum circuits in the file format of QASM, Quipper or Quantomatic;
Rewrite circuits into a pseudo-normal form using the ZX-calculus;
Extract new simplified circuits from these reduced graphs;
Visualise the ZX-graphs and rewrites using either Matplotlib, Quantomatic or as a TikZ file for use in LaTeX documents;
Output the optimised circuits in QASM, QC or QUIPPER format.
Modin uses Ray or Dask to provide an effortless way to speed up your pandas notebooks, scripts, and libraries. Unlike other distributed DataFrame libraries, Modin provides seamless integration and compatibility with existing pandas code.
The fast-histogram mini-package aims to provide simple and fast histogram functions for regular bins that don't compromise on performance. It doesn't do anything complicated - it just implements a simple histogram algorithm in C and keeps it simple. The aim is to have functions that are fast but also robust and reliable. The result is a 1D histogram function here that is 7-15x faster than numpy.histogram, and a 2D histogram function that is 20-25x faster than numpy.histogram2d.
This package provides a stable interface for interactions between Snakemake and its storage plugins.
Pyzo is a Python IDE focused on interactivity and introspection,which makes it very suitable for scientific computing. Its practical design is aimed at simplicity and efficiency.
It consists of two main components, the editor and the shell, and uses a set of pluggable tools to help the programmer in various ways. Some example tools are source structure, project manager, interactive help, workspace...
This package provides a Python wrapper around Fabio Crameri's perceptually uniform colormaps for scientific data visualization.
This package contains colormaps for commonly-used oceanographic variables. Most of the colormaps started from matplotlib colormaps, but have now been adjusted using the viscm tool to be perceptually uniform.
Vaex is a high performance Python library for lazy Out-of-Core DataFrames (similar to Pandas), to visualize and explore big tabular datasets. This package provides the core modules of Vaex.
unyt is a Python library working with data that has physical units. It defines the unyt.array.unyt_array and unyt.array.unyt_quantity classes (subclasses of NumPy’s ndarray class) for handling arrays and scalars with units,respectively
This package provides an extremely lightweight compatibility layer between dataframe libraries.
full API support: cuDF, Modin, pandas, Polars, PyArrow
lazy-only support: Dask, DuckDB, Ibis, PySpark, SQLFrame
This package provides tools to easily search and download French data from INSEE and IGN APIs. This data includes more than 150 000 macroeconomic series, a dozen datasets of local french data, numerous sources available on insee.fr, geographical limits of administrative areas taken from IGN as well as key metadata and SIRENE database containing data on all French compagnies.
Formulaic is a high-performance implementation of Wilkinson formulas for Python.