This tool implements quantile normalization. It properly resolves rank ties, which is important when ties happen frequently, such as when working with discrete numbers (integers) in count tables. This implementation should be relatively fast, and can use multiple cores to sort the columns and tie-resolvement is accelerated by numba.

Trend Micro Locality Sensitive Hash (TLSH) is a fuzzy matching library. Given a byte stream with a minimum length of 256 bytes, TLSH generates a hash value which can be used for similarity comparisons. Similar objects have similar hash values, which allows for the detection of similar objects by comparing their hash values. The byte stream should have a sufficient amount of complexity; for example, a byte stream of identical bytes will not generate a hash value.

This package provides various tools to supplement packaging Python releases.

The scp module extends the Paramiko library to send and receive files via the SCP1 protocol, as implemented by the OpenSSH scp program.

This package provides a way to format a simple (i.e. not nested) list into aligned columns.

This is a plugin for the Python code checking tool Flake8 to encourage correct string literal concatenation.

It looks for style problems like implicitly concatenated string literals on the same line (which can be introduced by the code formatting tool Black), or unnecessary plus operators for explicit string literal concatenation.

This regular expression implementation is backwards-compatible with the standard re module, but offers additional functionality like full case-folding for case-insensitive matches in Unicode.

Upload notebooks as .ipynb, .rmd, and .html to a notebooksharing.space instance.

XlsxWriter is a Python module that can be used to write text, numbers, formulas and hyperlinks to multiple worksheets in an Excel 2007+ XLSX file.

Lfdfiles is a Python library and console script for reading, writing, converting, and viewing many of the proprietary file formats used to store experimental data and metadata at the Laboratory for Fluorescence Dynamics.

This package provides the python-dotenv Python module to read key-value pairs from a .env file and set them as environment variables.

PyPEG is an intrinsic parser interpreter framework for Python. It is based on Parsing Expression Grammars, PEG. With pyPEG you can parse many formal languages.

This is a library that enables automated deprecations. It offers the deprecated() decorator to wrap functions, providing proper warnings both in documentation and via Python’s warnings system, as well as the deprecation.fail_if_not_removed() decorator for test methods to ensure that deprecated code is eventually removed.

A drop-in replacement for argparse that allows options to also be set via config files and/or environment variables.

This package implements the kneedle algorithm. Given a set of x and y values, kneed will return the knee point of the function. The knee point is the point of maximum curvature.

This package provides a command-line interface (CLI) to the Jinja2 template engine.

Retrieve a scale based on a given mode and starting note. Information about these scales can be found on Wikipedia.

This package providis typing stubs for python-aiofiles.

The python-distutils-extra module enables you to easily integrate gettext support, themed icons, and scrollkeeper-based documentation into Python's distutils.

This package provides is a small collection of algorithms that can be reused when throttling user interactions with a resource (e.g., an API).

This package contains a plugin for Flake8 finding likely bugs and design problems in your program. It contains warnings that don't belong in pyflakes and pycodestyle.

This package provides ddlparse, a Python library to parse and convert DDL to BigQuery JSON schema.

TFTPy is a trivial file transfer protocol (TFTP) Python library. It can be used to act both as a TFTP client or TFTP server.

This package provides the editor module for programmatically interfacing with your system's $EDITOR.