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\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-cabinets 0.6.0
Propagated dependencies: r-stringr@1.6.0 r-rstudioapi@0.17.1 r-renv@1.1.5 r-r6@2.6.1 r-glue@1.8.0 r-git2r@0.36.2 r-fs@1.6.6 r-crayon@1.5.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/nt-williams/cabinets
Licenses: Expat
Build system: r
Synopsis: Project Specific Workspace Organization Templates
Description:

This package creates project specific directory and file templates that are written to a .Rprofile file. Upon starting a new R session, these templates can be used to streamline the creation of new directories that are standardized to the user's preferences and can include the initiation of a git repository, an RStudio R project, and project-local dependency management with the renv package.

r-cepreader 1.3-0
Propagated dependencies: r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/
Licenses: FSDG-compatible
Build system: r
Synopsis: Read 'CEP' and Legacy 'CANOCO' Files
Description:

Read Condensed Cornell Ecology Program ('CEP') and legacy CANOCO files into R data frames.

r-ccid 1.2.0
Propagated dependencies: r-idetect@0.1.0 r-hdbinseg@1.0.3 r-genenet@1.2.17 r-gdata@3.0.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/Anastasiou-Andreas/ccid
Licenses: GPL 3
Build system: r
Synopsis: Cross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity
Description:

This package provides efficient implementation of the Cross-Covariance Isolate Detect (CCID) methodology for the estimation of the number and location of multiple change-points in the second-order (cross-covariance or network) structure of multivariate, possibly high-dimensional time series. The method is motivated by the detection of change points in functional connectivity networks for functional magnetic resonance imaging (fMRI), electroencephalography (EEG), magentoencephalography (MEG) and electrocorticography (ECoG) data. The main routines in the package have been extensively tested on fMRI data. For details on the CCID methodology, please see Anastasiou et al (2022), Cross-covariance isolate detect: A new change-point method for estimating dynamic functional connectivity. Medical Image Analysis, Volume 75.

r-chinapis 0.1.1
Propagated dependencies: r-tibble@3.3.0 r-scales@1.4.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/lightbluetitan/chinapis
Licenses: Expat
Build system: r
Synopsis: Access Chinese Data via Public APIs and Curated Datasets
Description:

This package provides functions to access data from public RESTful APIs including Nager.Date', World Bank API', and REST Countries API', retrieving real-time or historical data related to China, such as holidays, economic indicators, and international demographic and geopolitical indicators. Additionally, the package includes one of the largest curated collections of open datasets focused on China and Hong Kong, covering topics such as air quality, demographics, input-output tables, epidemiology, political structure, names, and social indicators. The package supports reproducible research and teaching by integrating reliable international APIs and structured datasets from public, academic, and government sources. For more information on the APIs, see: Nager.Date <https://date.nager.at/Api>, World Bank API <https://datahelpdesk.worldbank.org/knowledgebase/articles/889392>, and REST Countries API <https://restcountries.com/>.

r-cycletrendr 0.3.0
Propagated dependencies: r-tseries@0.10-58 r-nortest@1.0-4 r-nlme@3.1-168 r-mgcv@1.9-4 r-lomb@2.5.0 r-ggplot2@4.0.1 r-fancova@0.6-1 r-changepoint@2.3 r-blocklength@0.2.2
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/PietroPiu-labstats/cycleTrendR
Licenses: GPL 3
Build system: r
Synopsis: Adaptive Cycle and Trend Analysis for Irregular Time Series
Description:

This package provides adaptive trend estimation, cycle detection, Fourier harmonic selection, bootstrap confidence intervals, change-point detection, and rolling-origin forecasting. Supports LOESS (Locally Estimated Scatterplot Smoothing), GAM (Generalized Additive Model), and GAMM (Generalized Additive Mixed Model), and automatically handles irregular sampling using the Lomb-Scargle periodogram. Methods implemented in this package are described in Cleveland et al. (1990) <doi:10.2307/2289548>, Wood (2017) <doi:10.1201/9781315370279>, and Scargle (1982) <doi:10.1086/160554>.

r-coalescentmcmc 0.4-4
Propagated dependencies: r-phangorn@2.12.1 r-matrix@1.7-4 r-lattice@0.22-7 r-coda@0.19-4.1 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=coalescentMCMC
Licenses: GPL 2+
Build system: r
Synopsis: MCMC Algorithms for the Coalescent
Description:

Flexible framework for coalescent analyses in R. It includes a main function running the MCMC algorithm, auxiliary functions for tree rearrangement, and some functions to compute population genetic parameters. Extended description can be found in Paradis (2020) <doi:10.1201/9780429466700>. For details on the MCMC algorithm, see Kuhner et al. (1995) <doi:10.1093/genetics/140.4.1421> and Drummond et al. (2002) <doi:10.1093/genetics/161.3.1307>.

r-cymruservices 0.5.0
Propagated dependencies: r-stringi@1.8.7 r-pingr@2.0.5 r-memoise@2.0.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cymruservices
Licenses: Expat
Build system: r
Synopsis: Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services
Description:

This package provides a toolkit for querying Team Cymru <http://team-cymru.org> IP address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and Malware Hash Data Services.

r-caop-raa-2024 0.0.5
Propagated dependencies: r-tibble@3.3.0 r-stringi@1.8.7 r-sf@1.0-23 r-readr@2.1.6 r-glue@1.8.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/patterninstitute/CAOP.RAA.2024
Licenses: Expat
Build system: r
Synopsis: Official Administrative Map of the Azores (CAOP 2024)
Description:

This package provides the official administrative boundaries of the Azores (Região Autónoma dos Açores (RAA)) as defined in the 2024 edition of the Carta Administrativa Oficial de Portugal (CAOP), published by the Direção-Geral do Território (DGT). The package includes convenience functions to import these boundaries as sf objects for spatial analysis in R. Source: <https://geo2.dgterritorio.gov.pt/caop/CAOP_RAA_2024-gpkg.zip>.

r-coxphsgd 0.2.1
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/MarcinKosinski/coxphSGD/blob/master/README.md
Licenses: GPL 2
Build system: r
Synopsis: Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model
Description:

Estimate coefficients of Cox proportional hazards model using stochastic gradient descent algorithm for batch data.

r-ccdr 1.1.0
Propagated dependencies: r-urltools@1.7.3.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-purrr@1.2.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-data-table@1.17.8 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/USEPA/ccdR
Licenses: GPL 3+
Build system: r
Synopsis: Utilities for Interacting with the 'CTX' APIs
Description:

Access chemical, hazard, bioactivity, and exposure data from the Computational Toxicology and Exposure ('CTX') APIs <https://api-ccte.epa.gov/docs/>. ccdR was developed to streamline the process of accessing the information available through the CTX APIs without requiring prior knowledge of how to use APIs. Most data is also available on the CompTox Chemical Dashboard ('CCD') <https://comptox.epa.gov/dashboard/> and other resources found at the EPA Computational Toxicology and Exposure Online Resources <https://www.epa.gov/comptox-tools>.

r-crsmeta 0.3.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/hypertidy/crsmeta
Licenses: GPL 3
Build system: r
Synopsis: Extract Coordinate System Metadata
Description:

Obtain coordinate system metadata from various data formats. There are functions to extract a CRS (coordinate reference system, <https://en.wikipedia.org/wiki/Spatial_reference_system>) in EPSG (European Petroleum Survey Group, <http://www.epsg.org/>), PROJ4 <https://proj.org/>, or WKT2 (Well-Known Text 2, <http://docs.opengeospatial.org/is/12-063r5/12-063r5.html>) forms. This is purely for getting simple metadata from in-memory formats, please use other tools for out of memory data sources.

r-contourplot 0.2.0
Propagated dependencies: r-rcolorbrewer@1.1-3 r-interp@1.1-6
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=contourPlot
Licenses: Expat
Build system: r
Synopsis: Plots x,y,z Co-Ordinates in a Contour Map
Description:

Plots a set of x,y,z co-ordinates in a contour map. Designed to be similar to plots in base R so additional elements can be added using lines(), points() etc. This package is intended to be better suited, than existing packages, to displaying circular shaped plots such as those often seen in the semi-conductor industry.

r-coenocliner 0.2-4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/gavinsimpson/coenocliner/
Licenses: GPL 2
Build system: r
Synopsis: Coenocline Simulation
Description:

Simulate species occurrence and abundances (counts) along gradients.

r-corlink 1.0.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=corlink
Licenses: CC0
Build system: r
Synopsis: Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields
Description:

This package provides a matrix of agreement patterns and counts for record pairs is the input for the procedure. An EM algorithm is used to impute plausible values for missing record pairs. A second EM algorithm, incorporating possible correlations between per-field agreement, is used to estimate posterior probabilities that each pair is a true match - i.e. constitutes the same individual.

r-chnosz 2.2.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://chnosz.net/
Licenses: GPL 3
Build system: r
Synopsis: Thermodynamic Calculations and Diagrams for Geochemistry
Description:

An integrated set of tools for thermodynamic calculations in aqueous geochemistry and geobiochemistry. Functions are provided for writing balanced reactions to form species from user-selected basis species and for calculating the standard molal properties of species and reactions, including the standard Gibbs energy and equilibrium constant. Calculations of the non-equilibrium chemical affinity and equilibrium chemical activity of species can be portrayed on diagrams as a function of temperature, pressure, or activity of basis species; in two dimensions, this gives a maximum affinity or predominance diagram. The diagrams have formatted chemical formulas and axis labels, and water stability limits can be added to Eh-pH, oxygen fugacity- temperature, and other diagrams with a redox variable. The package has been developed to handle common calculations in aqueous geochemistry, such as solubility due to complexation of metal ions, mineral buffers of redox or pH, and changing the basis species across a diagram ("mosaic diagrams"). CHNOSZ also implements a group additivity algorithm for the standard thermodynamic properties of proteins.

r-ciplot 1.0
Propagated dependencies: r-multcomp@1.4-29 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/toshi-ara/CIplot
Licenses: GPL 2+
Build system: r
Synopsis: Functions to Plot Confidence Interval
Description:

Plot confidence interval from the objects of statistical tests such as t.test(), var.test(), cor.test(), prop.test() and fisher.test() ('htest class), Tukey test [TukeyHSD()], Dunnett test [glht() in multcomp package], logistic regression [glm()], and Tukey or Games-Howell test [posthocTGH() in userfriendlyscience package]. Users are able to set the styles of lines and points. This package contains the function to calculate odds ratios and their confidence intervals from the result of logistic regression.

r-dataverifyr 0.1.8
Propagated dependencies: r-yaml@2.3.10
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/DavZim/dataverifyr
Licenses: Expat
Build system: r
Synopsis: Lightweight, Flexible, and Fast Data Validation Package that Can Handle All Sizes of Data
Description:

Allows you to define rules which can be used to verify a given dataset. The package acts as a thin wrapper around more powerful data packages such as dplyr', data.table', arrow', and DBI ('SQL'), which do the heavy lifting.

r-demogr 0.6.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=demogR
Licenses: GPL 2+
Build system: r
Synopsis: Analysis of Age-Structured Demographic Models
Description:

Construction and analysis of matrix population models in R.

r-droll 0.1.0
Propagated dependencies: r-ryacas@1.1.6
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=droll
Licenses: Expat
Build system: r
Synopsis: Analyze Roll Distributions
Description:

This package provides a toolkit for parsing dice notation, analyzing rolls, calculating success probabilities, and plotting outcome distributions.

r-dimodal 1.0.3
Propagated dependencies: r-statmod@1.5.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=Dimodal
Licenses: Modified BSD
Build system: r
Synopsis: Spacing Tests for Multi-Modality
Description:

Tests for modality of data using its spacing. The main approach evaluates features (peaks, flats) using a combination of parametric models and non-parametric tests, either after smoothing the spacing by a low-pass filter or by looking over larger intervals.

r-dream 1.0.1
Propagated dependencies: r-rcpp@1.1.0 r-lifecycle@1.0.4 r-foreach@1.5.2 r-fastmatch@1.1-6 r-dqrng@0.4.1 r-doparallel@1.0.17 r-data-table@1.17.8 r-collapse@2.1.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/kevinCarson/dream
Licenses: Expat
Build system: r
Synopsis: Dynamic Relational Event Analysis and Modeling
Description:

This package provides a set of tools for relational and event analysis, including two- and one-mode network brokerage and structural measures, and helper functions optimized for relational event analysis with large datasets, including creating relational risk sets, computing network statistics, estimating relational event models, and simulating relational event sequences. For more information on relational event models, see Butts (2008) <doi:10.1111/j.1467-9531.2008.00203.x>, Lerner and Lomi (2020) <doi:10.1017/nws.2019.57>, Bianchi et al. (2024) <doi:10.1146/annurev-statistics-040722-060248>, and Butts et al. (2023) <doi:10.1017/nws.2023.9>. In terms of the structural measures in this package, see Leal (2025) <doi:10.1177/00491241251322517>, Burchard and Cornwell (2018) <doi:10.1016/j.socnet.2018.04.001>, and Fujimoto et al. (2018) <doi:10.1017/nws.2018.11>. This package was developed with support from the National Science Foundationâ s (NSF) Human Networks and Data Science Program (HNDS) under award number 2241536 (PI: Diego F. Leal). Any opinions, findings, and conclusions, or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of the NSF.

r-d4talink-light 2.1.21
Propagated dependencies: r-rsqlite@2.4.4 r-rmarkdown@2.30 r-rjson@0.2.23 r-reticulate@1.44.1 r-quarto@1.5.1 r-openxlsx@4.2.8.1 r-openssl@2.3.4 r-officedown@0.4.1 r-getpass@0.2-4 r-feather@0.3.5 r-dbi@1.2.3 r-biobase@2.70.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://bitbucket.org/SQ4/d4talink.light
Licenses: GPL 3
Build system: r
Synopsis: GDP - Workflow Management
Description:

Tools, methods and processes for the management of analysis workflows. These lightweight solutions facilitate structuring R&D activities. These solutions were developed to comply with Good Documentation Practice (GDP), with ALCOA+ principles as proposed by the U.S. FDA, and with FAIR principles as discussed by Jacobsen et al. (2017) <doi:10.1162/dint_r_00024>.

r-dtaplots 1.0.2.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DTAplots
Licenses: GPL 2+
Build system: r
Synopsis: Creates Plots Accompanying Bayesian Diagnostic Test Accuracy Meta-Analyses
Description:

Function to create forest plots. Functions to use posterior samples from Bayesian bivariate meta-analysis model, Bayesian hierarchical summary receiver operating characteristic (HSROC) meta-analysis model or Bayesian latent class (LC) meta-analysis model to create Summary Receiver Operating Characteristic (SROC) plots using methods described by Harbord et al (2007)<doi:10.1093/biostatistics/kxl004>.

r-drviaspcn 0.1.5
Propagated dependencies: r-pheatmap@1.0.13 r-igraph@2.2.1 r-gsva@2.4.1 r-clusterprofiler@4.18.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DRviaSPCN
Licenses: GPL 2+
Build system: r
Synopsis: Drug Repurposing in Cancer via a Subpathway Crosstalk Network
Description:

This package provides a systematic biology tool was developed to repurpose drugs via a subpathway crosstalk network. The operation modes include 1) calculating centrality scores of SPs in the context of gene expression data to reflect the influence of SP crosstalk, 2) evaluating drug-disease reverse association based on disease- and drug-induced SPs weighted by the SP crosstalk, 3) identifying cancer candidate drugs through perturbation analysis. There are also several functions used to visualize the results.

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