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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-equivump 0.1.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/thmild/equivUMP
Licenses: GPL 2+
Build system: r
Synopsis: Uniformly Most Powerful Invariant Tests of Equivalence
Description:

Implementation of uniformly most powerful invariant equivalence tests for one- and two-sample problems (paired and unpaired) as described in Wellek (2010, ISBN:978-1-4398-0818-4). Also one-sided alternatives (non-inferiority and non-superiority tests) are supported. Basically a variant of a t-test with (relaxed) null and alternative hypotheses exchanged.

r-ehr 0.4-11
Propagated dependencies: r-pkdata@0.1.0 r-lubridate@1.9.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://choileena.github.io/
Licenses: GPL 3+
Build system: r
Synopsis: Electronic Health Record (EHR) Data Processing and Analysis Tool
Description:

Process and analyze electronic health record (EHR) data. The EHR package provides modules to perform diverse medication-related studies using data from EHR databases. Especially, the package includes modules to perform pharmacokinetic/pharmacodynamic (PK/PD) analyses using EHRs, as outlined in Choi, Beck, McNeer, Weeks, Williams, James, Niu, Abou-Khalil, Birdwell, Roden, Stein, Bejan, Denny, and Van Driest (2020) <doi:10.1002/cpt.1787>. Additional modules will be added in future. In addition, this package provides various functions useful to perform Phenome Wide Association Study (PheWAS) to explore associations between drug exposure and phenotypes obtained from EHR data, as outlined in Choi, Carroll, Beck, Mosley, Roden, Denny, and Van Driest (2018) <doi:10.1093/bioinformatics/bty306>.

r-esmisc 0.0.3
Propagated dependencies: r-readr@2.1.6 r-raster@3.6-32 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/EDiLD/esmisc
Licenses: Expat
Build system: r
Synopsis: Misc Functions of Eduard Szöcs
Description:

Misc functions programmed by Eduard Szöcs. Provides read_regnie() to read gridded precipitation data from German Weather Service (DWD, see <http://www.dwd.de/> for more information).

r-evalr 0.0.1
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=evalR
Licenses: Expat
Build system: r
Synopsis: Evaluation of Unverified Code
Description:

The purpose of this package is to generate trees and validate unverified code. Trees are made by parsing a statement into a verification tree data structure. This will make it easy to port the statement into another language. Safe statement evaluations are done by executing the verification trees.

r-eoffice 0.2.3
Propagated dependencies: r-rvg@0.4.1 r-rlang@1.1.6 r-r-devices@2.17.2 r-plotly@4.11.0 r-officer@0.7.1 r-magrittr@2.0.4 r-magick@2.9.0 r-htmlwidgets@1.6.4 r-ggplotify@0.1.3 r-ggplot2@4.0.1 r-flextable@0.9.10 r-dplyr@1.1.4 r-devemf@4.5-1 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=eoffice
Licenses: GPL 2
Build system: r
Synopsis: Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables
Description:

This package provides wrap functions to export and import graphics and data frames in R to microsoft office. And This package also provide write out figures with lots of different formats. Since people may work on the platform without GUI support, the package also provide function to easily write out figures to lots of different type of formats. Now this package provide function to extract colors from all types of figures and pdf files.

r-eemdtdnn 0.1.0
Propagated dependencies: r-rlibeemd@1.4.4 r-forecast@8.24.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=eemdTDNN
Licenses: GPL 3
Build system: r
Synopsis: EEMD and Its Variant Based Time Delay Neural Network Model
Description:

Forecasting univariate time series with different decomposition based time delay neural network models. For method details see Yu L, Wang S, Lai KK (2008). <doi:10.1016/j.eneco.2008.05.003>.

r-evclass 2.0.2
Propagated dependencies: r-r-utils@2.13.0 r-ibelief@1.3.1 r-fnn@1.1.4.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=evclass
Licenses: GPL 3
Build system: r
Synopsis: Evidential Distance-Based Classification
Description:

Different evidential classifiers, which provide outputs in the form of Dempster-Shafer mass functions. The methods are: the evidential K-nearest neighbor rule, the evidential neural network, radial basis function neural networks, logistic regression, feed-forward neural networks.

r-emdi 2.2.3
Propagated dependencies: r-stringr@1.6.0 r-spdep@1.4-1 r-saerobust@0.5.0 r-rlang@1.1.6 r-reshape2@1.4.5 r-readods@2.3.2 r-parallelmap@1.5.1 r-openxlsx@4.2.8.1 r-nlme@3.1-168 r-moments@0.14.1 r-mass@7.3-65 r-hlmdiag@0.5.1 r-gridextra@2.3 r-ggplot2@4.0.1 r-formula-tools@1.7.1 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/SoerenPannier/emdi
Licenses: GPL 2
Build system: r
Synopsis: Estimating and Mapping Disaggregated Indicators
Description:

This package provides functions that support estimating, assessing and mapping regional disaggregated indicators. So far, estimation methods comprise direct estimation, the model-based unit-level approach Empirical Best Prediction (see "Small area estimation of poverty indicators" by Molina and Rao (2010) <doi:10.1002/cjs.10051>), the area-level model (see "Estimates of income for small places: An application of James-Stein procedures to Census Data" by Fay and Herriot (1979) <doi:10.1080/01621459.1979.10482505>) and various extensions of it (adjusted variance estimation methods, log and arcsin transformation, spatial, robust and measurement error models), as well as their precision estimates. The assessment of the used model is supported by a summary and diagnostic plots. For a suitable presentation of estimates, map plots can be easily created. Furthermore, results can easily be exported to excel. For a detailed description of the package and the methods used see "The R Package emdi for Estimating and Mapping Regionally Disaggregated Indicators" by Kreutzmann et al. (2019) <doi:10.18637/jss.v091.i07> and the second package vignette "A Framework for Producing Small Area Estimates Based on Area-Level Models in R".

r-elfdistr 1.0.1
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/matheushjs/elfDistr
Licenses: Expat
Build system: r
Synopsis: Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution
Description:

Density, distribution function, quantile function and random generation for the Kumaraswamy Complementary Weibull Geometric (Kw-CWG) lifetime probability distribution proposed in Afify, A.Z. et al (2017) <doi:10.1214/16-BJPS322>.

r-expowo 3.0
Propagated dependencies: r-viridislite@0.4.2 r-tibble@3.3.0 r-sp@2.2-0 r-sf@1.0-23 r-scales@1.4.0 r-rnaturalearth@1.1.0 r-rcolorbrewer@1.1-3 r-r-utils@2.13.0 r-pupillometryr@0.0.6 r-plyr@1.8.9 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-flora@0.3.4 r-dplyr@1.1.4 r-data-table@1.17.8 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://dboslab.github.io/expowo/
Licenses: Expat
Build system: r
Synopsis: An R Package for Mining Global Plant Diversity and Distribution Data
Description:

This package produces diversity estimates and species lists with associated global distribution for any vascular plant family and genus from Plants of the World Online database <https://powo.science.kew.org/>, by interacting with the source code of each plant taxon page. It also creates global maps of species richness, graphics of species discoveries and name changes over time. For more details: Zuanny, D.C., B.Vilela, P.W.Moonlight, T.E.Särkinen, and D.Cardoso. 2024. expowo: An R package for mining global plant diversity and distribution data. Applications in Plant Sciences 12: e11609'.

r-energygof 0.1
Propagated dependencies: r-statmod@1.5.1 r-gsl@2.1-9 r-fitdistrplus@1.2-4 r-energy@1.7-12 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/jthaman/energyGOF
Licenses: GPL 3+
Build system: r
Synopsis: Goodness-of-Fit Tests for Univariate Data via Energy
Description:

Conduct one- and two-sample goodness-of-fit tests for univariate data. In the one-sample case, normal, uniform, exponential, Bernoulli, binomial, geometric, beta, Poisson, lognormal, Laplace, asymmetric Laplace, inverse Gaussian, half-normal, chi-squared, gamma, F, Weibull, Cauchy, and Pareto distributions are supported. egof.test() can also test goodness-of-fit to any distribution with a continuous distribution function. A subset of the available distributions can be tested for the composite goodness-of-fit hypothesis, that is, one can test for distribution fit with unknown parameters. P-values are calculated via parametric bootstrap.

r-epinow2 1.8.0
Propagated dependencies: r-truncnorm@1.0-9 r-stanheaders@2.32.10 r-scales@1.4.0 r-runner@0.4.4 r-rstantools@2.5.0 r-rstan@2.32.7 r-rlang@1.1.6 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-r-utils@2.13.0 r-purrr@1.2.0 r-primarycensored@1.4.0 r-posterior@1.6.1 r-patchwork@1.3.2 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-ggplot2@4.0.1 r-futile-logger@1.4.3 r-data-table@1.17.8 r-cli@3.6.5 r-checkmate@2.3.3 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://epiforecasts.io/EpiNow2/
Licenses: Expat
Build system: r
Synopsis: Estimate and Forecast Real-Time Infection Dynamics
Description:

Estimates the time-varying reproduction number, rate of spread, and doubling time using a renewal equation approach combined with Bayesian inference via Stan. Supports Gaussian process and random walk priors for modelling changes in transmission over time. Accounts for delays between infection and observation (incubation period, reporting delays), right-truncation in recent data, day-of-week effects, and observation overdispersion. Can estimate relationships between primary and secondary outcomes (e.g., cases to hospitalisations or deaths) and forecast both. Runs across multiple regions in parallel. Based on Abbott et al. (2020) <doi:10.12688/wellcomeopenres.16006.1> and Gostic et al. (2020) <doi:10.1101/2020.06.18.20134858>.

r-eeaaq 1.0.3
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-sf@1.0-23 r-readr@2.1.6 r-raster@3.6-32 r-lubridate@1.9.4 r-leaflet@2.2.3 r-httr@1.4.7 r-htmlwidgets@1.6.4 r-gstat@2.1-4 r-gifski@1.32.0-2 r-ggspatial@1.1.10 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-curl@7.0.0 r-arrow@22.0.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/PaoloMaranzano/EEAaq_R
Licenses: GPL 3+
Build system: r
Synopsis: Handle Air Quality Data from the European Environment Agency Data Portal
Description:

This software downloads and manages air quality data from the European Environmental Agency (EEA) dataflow (<https://www.eea.europa.eu/data-and-maps/data/aqereporting-9>). See the web page <https://eeadmz1-downloads-webapp.azurewebsites.net/> for details on the EEA's Air Quality Download Service. The package allows dynamically mapping the stations, summarising and time aggregating the measurements and building spatial interpolation maps. See the web page <https://www.eea.europa.eu/en> for further information on EEA activities and history. Further details, as well as, an extended vignette of the main functions included in the package, are available at the GitHub web page dedicated to the project.

r-experiment 1.2.1
Propagated dependencies: r-mass@7.3-65 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/kosukeimai/experiment
Licenses: GPL 2+
Build system: r
Synopsis: R Package for Designing and Analyzing Randomized Experiments
Description:

This package provides various statistical methods for designing and analyzing randomized experiments. One functionality of the package is the implementation of randomized-block and matched-pair designs based on possibly multivariate pre-treatment covariates. The package also provides the tools to analyze various randomized experiments including cluster randomized experiments, two-stage randomized experiments, randomized experiments with noncompliance, and randomized experiments with missing data.

r-evtclass 1.0
Propagated dependencies: r-rann@2.6.2 r-fitdistrplus@1.2-4 r-evd@2.3-7.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=evtclass
Licenses: GPL 3
Build system: r
Synopsis: Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers
Description:

Two classifiers for open set recognition and novelty detection based on extreme value theory. The first classifier is based on the generalized Pareto distribution (GPD) and the second classifier is based on the generalized extreme value (GEV) distribution. For details, see Vignotto, E., & Engelke, S. (2018) <arXiv:1808.09902>.

r-easybio 1.2.3
Propagated dependencies: r-xml2@1.5.0 r-r6@2.6.1 r-httr2@1.2.1 r-ggplot2@4.0.1 r-data-table@1.17.8 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/person-c/easybio
Licenses: Expat
Build system: r
Synopsis: Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit
Description:

This package provides a comprehensive toolkit for single-cell annotation with the CellMarker2.0 database (see Xia Li, Peng Wang, Yunpeng Zhang (2023) <doi: 10.1093/nar/gkac947>). Streamlines biological label assignment in single-cell RNA-seq data and facilitates transcriptomic analysis, including preparation of TCGA<https://portal.gdc.cancer.gov/> and GEO<https://www.ncbi.nlm.nih.gov/geo/> datasets, differential expression analysis and visualization of enrichment analysis results. Additional utility functions support various bioinformatics workflows. See Wei Cui (2024) <doi: 10.1101/2024.09.14.609619> for more details.

r-equisurv 0.1.0
Propagated dependencies: r-survival@3.8-3 r-eha@2.11.5
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=EquiSurv
Licenses: GPL 2+
Build system: r
Synopsis: Modeling, Confidence Intervals and Equivalence of Survival Curves
Description:

We provide a non-parametric and a parametric approach to investigate the equivalence (or non-inferiority) of two survival curves, obtained from two given datasets. The test is based on the creation of confidence intervals at pre-specified time points. For the non-parametric approach, the curves are given by Kaplan-Meier curves and the variance for calculating the confidence intervals is obtained by Greenwood's formula. The parametric approach is based on estimating the underlying distribution, where the user can choose between a Weibull, Exponential, Gaussian, Logistic, Log-normal or a Log-logistic distribution. Estimates for the variance for calculating the confidence bands are obtained by a (parametric) bootstrap approach. For this bootstrap censoring is assumed to be exponentially distributed and estimates are obtained from the datasets under consideration. All details can be found in K.Moellenhoff and A.Tresch: Survival analysis under non-proportional hazards: investigating non-inferiority or equivalence in time-to-event data <arXiv:2009.06699>.

r-esaps 0.2.2
Propagated dependencies: r-tidyr@1.3.1 r-readxl@1.4.5 r-readods@2.3.2 r-plyr@1.8.9 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/Nicolas-Schmidt/esaps
Licenses: GPL 2
Build system: r
Synopsis: Indicators of Electoral Systems and Party Systems
Description:

It allows structuring electoral data of different size and structure to calculate various indicators frequently used in the studies of electoral systems and party systems. Indicators of electoral volatility, electoral disproportionality, party nationalization and the effective number of parties are included.

r-epilps 1.3.0
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-gridextra@2.3 r-ggplot2@4.0.1 r-epiestim@2.2-5 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: <https://epilps.com/>
Licenses: GPL 3
Build system: r
Synopsis: Fast and Flexible Bayesian Tool for Estimating Epidemiological Parameters
Description:

Estimation of epidemiological parameters with Laplacian-P-splines following the methodology of Gressani et al. (2022) <doi:10.1371/journal.pcbi.1010618>.

r-emmixmfa 2.0.14
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/suren-rathnayake/EMMIXmfa
Licenses: GPL 2+
Build system: r
Synopsis: Mixture Models with Component-Wise Factor Analyzers
Description:

We provide functions to fit finite mixtures of multivariate normal or t-distributions to data with various factor analytic structures adopted for the covariance/scale matrices. The factor analytic structures available include mixtures of factor analyzers and mixtures of common factor analyzers. The latter approach is so termed because the matrix of factor loadings is common to components before the component-specific rotation of the component factors to make them white noise. Note that the component-factor loadings are not common after this rotation. Maximum likelihood estimators of model parameters are obtained via the Expectation-Maximization algorithm. See descriptions of the algorithms used in McLachlan GJ, Peel D (2000) <doi:10.1002/0471721182.ch8> McLachlan GJ, Peel D (2000) <ISBN:1-55860-707-2> McLachlan GJ, Peel D, Bean RW (2003) <doi:10.1016/S0167-9473(02)00183-4> McLachlan GJ, Bean RW, Ben-Tovim Jones L (2007) <doi:10.1016/j.csda.2006.09.015> Baek J, McLachlan GJ, Flack LK (2010) <doi:10.1109/TPAMI.2009.149> Baek J, McLachlan GJ (2011) <doi:10.1093/bioinformatics/btr112> McLachlan GJ, Baek J, Rathnayake SI (2011) <doi:10.1002/9781119995678.ch9>.

r-emmli 0.0.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/timcdlucas/EMMLi
Licenses: Expat
Build system: r
Synopsis: Maximum Likelihood Approach to the Analysis of Modularity
Description:

Fit models of modularity to morphological landmarks. Perform model selection on results. Fit models with a single within-module correlation or with separate within-module correlations fitted to each module.

r-errors 0.4.4
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://r-quantities.github.io/errors/
Licenses: Expat
Build system: r
Synopsis: Uncertainty Propagation for R Vectors
Description:

Support for measurement errors in R vectors, matrices and arrays: automatic uncertainty propagation and reporting. Documentation about errors is provided in the paper by Ucar, Pebesma & Azcorra (2018, <doi:10.32614/RJ-2018-075>), included in this package as a vignette; see citation("errors") for details.

r-eseis 0.8.1
Propagated dependencies: r-xml@3.99-0.20 r-terra@1.8-86 r-signal@1.8-1 r-shiny@1.11.1 r-rmarkdown@2.30 r-reticulate@1.44.1 r-rcpp@1.1.0 r-minpack-lm@1.2-4 r-matrixstats@1.5.0 r-fftw@1.0-9 r-extradistr@1.10.0 r-colorspace@2.1-2 r-catools@1.18.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=eseis
Licenses: GPL 3
Build system: r
Synopsis: Environmental Seismology Toolbox
Description:

Environmental seismology is a scientific field that studies the seismic signals, emitted by Earth surface processes. This package provides all relevant functions to read/write seismic data files, prepare, analyse and visualise seismic data, and generate reports of the processing history.

r-ecoindr 2.0
Propagated dependencies: r-vegan@2.7-2 r-splancs@2.01-45 r-rarity@1.3-8 r-picante@1.8.2 r-fd@1.0-12.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=EcoIndR
Licenses: GPL 2+
Build system: r
Synopsis: Ecological Indicators
Description:

Calculates several indices, such as of diversity, fluctuation, etc., and they are used to estimate ecological indicators.

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Total results: 21457