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Fits the lifespan datasets of biological systems such as yeast, fruit flies, and other similar biological units with well-known finite mixture models introduced by Farewell et al. (1982) <doi:10.2307/2529885> and Al-Hussaini et al. (2000) <doi:10.1080/00949650008812033>. Estimates parameter space fitting of a lifespan dataset with finite mixtures of parametric distributions. Computes the following tasks; 1) Estimates parameter space of the finite mixture model by implementing the expectation maximization (EM) algorithm. 2) Finds a sequence of four goodness-of-fit measures consist of Akaike Information Criterion (AIC), Bayesian Information Criterion (BIC), Kolmogorov-Smirnov (KS), and log-likelihood (log-likelihood) statistics. 3)The initial values is determined by k-means clustering.
The ability to tune models is important. finetune enhances the tune package by providing more specialized methods for finding reasonable values of model tuning parameters. Two racing methods described by Kuhn (2014) <doi:10.48550/arXiv.1405.6974> are included. An iterative search method using generalized simulated annealing (Bohachevsky, Johnson and Stein, 1986) <doi:10.1080/00401706.1986.10488128> is also included.
Four fertility models are fitted using non-linear least squares. These are the Hadwiger, the Gamma, the Model1 and Model2, following the terminology of the following paper: Peristera P. and Kostaki A. (2007). "Modeling fertility in modern populations". Demographic Research, 16(6): 141--194. <doi:10.4054/DemRes.2007.16.6>. Model based averaging is also supported.
This package contains financial math functions and introductory derivative functions included in the Society of Actuaries and Casualty Actuarial Society Financial Mathematics exam, and some topics in the Models for Financial Economics exam.
An implementation of the Fizz Buzz algorithm, as defined e.g. in <https://en.wikipedia.org/wiki/Fizz_buzz>. It provides the standard algorithm with 3 replaced by Fizz and 5 replaced by Buzz, with the option of specifying start and end numbers, step size and the numbers being replaced by fizz and buzz, respectively. This package gives interviewers the optional answer of "I use fizzbuzzR::fizzbuzz()" when interviewing rather than having to write an algorithm themselves.
Tests for Kaiser-Meyer-Olkin (KMO) and communalities in a dataset. It provides a final sample by removing variables in a iterable manner while keeping account of the variables that were removed in each step. It follows the best practices and assumptions according to Hair, Black, Babin & Anderson (2018, ISBN:9781473756540).
This package provides functions and datasets from the book "Forest Analytics with R".
Provide functions for forest inventory calculations. Common volumetric equations (Smalian, Newton and Huber) as well stacking factor and form.
Some functions of ade4 and stats are combined in order to obtain a partition of the rows of a data table, with columns representing variables of scales: quantitative, qualitative or frequency. First, a principal axes method is performed and then, a combination of Ward agglomerative hierarchical classification and K-means is performed, using some of the first coordinates obtained from the previous principal axes method. In order to permit different weights of the elements to be clustered, the function kmeansW', programmed in C++, is included. It is a modification of kmeans'. Some graphical functions include the option: gg=FALSE'. When gg=TRUE', they use the ggplot2 and ggrepel packages to avoid the super-position of the labels.
Estimates average treatment effects using kernel energy balancing with random forest similarity kernels. A multivariate random forest jointly models covariates, outcome, and treatment to build a similarity kernel between observations. This kernel is then used for energy balancing to create weights that control for confounding. The method is described in De and Huling (2025) <doi:10.48550/arXiv.2512.18069>.
This package provides a tool to explore wide data sets, by detecting, ranking and plotting groups of statistically dependent columns.
This package implements the Factor-Augmented Clustering Tree (FACT) algorithm for clustering time series data. The method constructs a classification tree where splits are determined by covariates, and the splitting criterion is based on a group factor model representation of the time series within each node. Both threshold-based and permutation-based tests are supported for splitting decisions, with an option for parallel computation. For methodological details, see Hu, Li, Luo, and Wang (2025, in preparation), Factor-Augmented Clustering Tree for Time Series.
Many functions to easily vizualise and estimate indicators such as proportions, means, medians and continuous/discrete distributions from complex survey data. The package also estimates confidence intervals for all indicators, compares different groups and computes different statistical tests.
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event of fault trees are issues important in reliability analysis of complex systems. Here, a fault tree is provided in terms of its minimal cut sets, along with reliability and maintainability distribution functions of the basic events. All the methods are derived from Horton (2002, ISBN: 3-936150-21-4), Niloofar and Lazarova-Molnar (2022).
Automated time series forecasting developed by Microsoft Finance. The Microsoft Finance Time Series Forecasting Framework, aka Finn, can be used to forecast any component of the income statement, balance sheet, or any other area of interest by finance. Any numerical quantity over time, Finn can be used to forecast it. While it can be applied outside of the finance domain, Finn was built to meet the needs of financial analysts to better forecast their businesses within a company, and has a lot of built in features that are specific to the needs of financial forecasters. Happy forecasting!
This package provides functions to implement the Flexible cFDR (Hutchinson et al. (2021) <doi:10.1371/journal.pgen.1009853>) and Binary cFDR (Hutchinson et al. (2021) <doi:10.1101/2021.10.21.465274>) methodologies to leverage auxiliary data from arbitrary distributions, for example functional genomic data, with GWAS p-values to generate re-weighted p-values.
Transform output files of some tools to the microtable object of microtable class in microeco package. The microtable class is the basic class in microeco package and is necessary for the downstream microbial community data analysis.
S4 classes for univariate and multivariate functional data with utility functions. See <doi:10.18637/jss.v093.i05> for a detailed description of the package functionalities and its interplay with the MFPCA package for multivariate functional principal component analysis <https://CRAN.R-project.org/package=MFPCA>.
This package provides functional tools such as fmap(), fwalk(), and fapply() to iterate over vectors, data frames, or grouped data with optional parallelism and real-time progress tracking. Designed for readable and reproducible workflows, including support for Monte Carlo simulations and benchmarking.
This package provides a population genetic simulator, which is able to generate synthetic datasets for single-nucleotide polymorphisms (SNP) for multiple populations. The genetic distances among populations can be set according to the Fixation Index (Fst) as explained in Balding and Nichols (1995) <doi:10.1007/BF01441146>. This tool is able to simulate outlying individuals and missing SNPs can be specified. For Genome-wide association study (GWAS), disease status can be set in desired level according risk ratio.
This is a fast and flexible implementation of the Kalman filter and smoother, which can deal with NAs. It is entirely written in C and relies fully on linear algebra subroutines contained in BLAS and LAPACK. Due to the speed of the filter, the fitting of high-dimensional linear state space models to large datasets becomes possible. This package also contains a plot function for the visualization of the state vector and graphical diagnostics of the residuals.
Efficient computation of the Liu regression coefficient paths, Liu-related statistics and information criteria for a grid of the regularization parameter. The computations are based on the C++ library Armadillo through the R package Rcpp'.
Define feature logic, compute only new or unprocessed rows, and persist the resulting flat feature table in a database. The package provides an explicit incremental pipeline for fetching source rows, computing feature definitions, and writing computed features to a database table.
This package provides functionality for testing familial hypotheses. Supports testing centers belonging to the Huber family. Testing is carried out using the Bayesian bootstrap. One- and two-sample tests are supported, as are directional tests. Methods for visualizing output are provided.