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This is a package for implementation of Flury-Gautschi algorithms.
This package provides tools to support sensible statistics for functional response analysis.
Download data sets from Kenneth's French finance data library site <http://mba.tuck.dartmouth.edu/pages/faculty/ken.french/data_library.html>, reads all the data subsets from the file. Allows R users to collect the data as tidyverse'-ready data frames.
Bindings to libfluidsynth to parse and synthesize MIDI files. It can read MIDI into a data frame, play it on the local audio device, or convert into an audio file.
An implementation of multiple regression models for count data. These include various forms of the negative binomial (NB-1, NB-2, NB-P, generalized negative binomial, etc.), Poisson-Lognormal, other compound Poisson distributions, the Generalized Waring model, etc. Information on the different forms of the negative binomial are described by Greene (2008) <doi:10.1016/j.econlet.2007.10.015>. For treatises on count models, see Cameron and Trivedi (2013) <doi:10.1017/CBO9781139013567> and Hilbe (2012) <doi:10.1017/CBO9780511973420>. For the implementation of under-reporting in count models, see Wood et al. (2016) <doi:10.1016/j.aap.2016.06.013>. For prediction methods in random parameter models, see Wood and Gayah (2025) <doi:10.1016/j.aap.2025.108147>. For estimating random parameters using maximum simulated likelihood, see Greene and Hill (2010) <doi:10.1108/S0731-9053(2010)26>; Gourieroux and Monfort (1996) <doi:10.1093/0198774753.001.0001>; or Hensher et al. (2015) <doi:10.1017/CBO9781316136232>.
An interface to the fastText <https://github.com/facebookresearch/fastText> library for efficient learning of word representations and sentence classification. The fastText algorithm is explained in detail in (i) "Enriching Word Vectors with subword Information", Piotr Bojanowski, Edouard Grave, Armand Joulin, Tomas Mikolov, 2017, <doi:10.1162/tacl_a_00051>; (ii) "Bag of Tricks for Efficient Text Classification", Armand Joulin, Edouard Grave, Piotr Bojanowski, Tomas Mikolov, 2017, <doi:10.18653/v1/e17-2068>; (iii) "FastText.zip: Compressing text classification models", Armand Joulin, Edouard Grave, Piotr Bojanowski, Matthijs Douze, Herve Jegou, Tomas Mikolov, 2016, <doi:10.48550/arXiv.1612.03651>.
This package provides a toolbox to derive flexible cutoffs for fit indices in Covariance-based Structural Equation Modeling based on the paper by Niemand & Mai (2018) <doi:10.1007/s11747-018-0602-9>. Flexible cutoffs are an alternative to fixed cutoffs - rules-of-thumb - regarding an appropriate cutoff for fit indices such as CFI or SRMR'. It has been demonstrated that these flexible cutoffs perform better than fixed cutoffs in grey areas where misspecification is not easy to detect. The package provides an alternative to the tool at <https://flexiblecutoffs.org> as it allows to tailor flexible cutoffs to a given dataset and model, which is so far not available in the tool. The package simulates fit indices based on a given dataset and model and then estimates the flexible cutoffs. Some useful functions, e.g., to determine the GoF- or BoF-nature of a fit index, are provided. So far, additional options for a relative use (is a model better than another?) are provided in an exploratory manner.
This package contains four main functions (i.e., four pieces of furniture): table1() which produces a well-formatted table of descriptive statistics common as Table 1 in research articles, tableC() which produces a well-formatted table of correlations, tableF() which provides frequency counts, and washer() which is helpful in cleaning up the data. These furniture-themed functions are designed to simplify common tasks in quantitative analysis. Other data summary and cleaning tools are also available.
Construction, calculation and display of fault trees. Methods derived from Clifton A. Ericson II (2005, ISBN: 9780471739425) <DOI:10.1002/0471739421>, Antoine Rauzy (1993) <DOI:10.1016/0951-8320(93)90060-C>, Tim Bedford and Roger Cooke (2012, ISBN: 9780511813597) <DOI:10.1017/CBO9780511813597>, Nikolaos Limnios, (2007, ISBN: 9780470612484) <DOI: 10.1002/9780470612484>.
This package provides a wrapper for the Filebin API. Filebin implements convenient file sharing on the web.
In competing risks regression, the proportional subdistribution hazards (PSH) model is popular for its direct assessment of covariate effects on the cumulative incidence function. This package allows for both penalized and unpenalized PSH regression in linear time using a novel forward-backward scan. Penalties include Ridge, Lease Absolute Shrinkage and Selection Operator (LASSO), Smoothly Clipped Absolute Deviation (SCAD), Minimax Concave Plus (MCP), and elastic net <doi: 10.32614/RJ-2021-010>.
This package implements the AdaptiveImpute matrix completion algorithm of Intelligent Initialization and Adaptive Thresholding for Iterative Matrix Completion <doi:10.1080/10618600.2018.1518238> as well as the specialized variant of Co-Factor Analysis of Citation Networks <doi:10.1080/10618600.2024.2394464>. AdaptiveImpute is useful for embedding sparsely observed matrices, often out performs competing matrix completion algorithms, and self-tunes its hyperparameter, making usage easy.
Automated time series forecasting developed by Microsoft Finance. The Microsoft Finance Time Series Forecasting Framework, aka Finn, can be used to forecast any component of the income statement, balance sheet, or any other area of interest by finance. Any numerical quantity over time, Finn can be used to forecast it. While it can be applied outside of the finance domain, Finn was built to meet the needs of financial analysts to better forecast their businesses within a company, and has a lot of built in features that are specific to the needs of financial forecasters. Happy forecasting!
Easy installation, loading and management, of high-performance packages for statistical computing and data manipulation in R. The core fastverse consists of 4 packages: data.table', collapse', kit and magrittr', that jointly only depend on Rcpp'. The fastverse can be freely and permanently extended with additional packages, both globally or for individual projects. Separate package verses can also be created. Fast packages for many common tasks such as time series, dates and times, strings, spatial data, statistics, data serialization, larger-than-memory processing, and compilation of R code are listed in the README file: <https://github.com/fastverse/fastverse#suggested-extensions>.
Download geospatial data available from several federated data sources (mainly sources maintained by the US Federal government). Currently, the package enables extraction from nine datasets: The National Elevation Dataset digital elevation models (<https://www.usgs.gov/3d-elevation-program> 1 and 1/3 arc-second; USGS); The National Hydrography Dataset (<https://www.usgs.gov/national-hydrography/national-hydrography-dataset>; USGS); The Soil Survey Geographic (SSURGO) database from the National Cooperative Soil Survey (<https://websoilsurvey.sc.egov.usda.gov/>; NCSS), which is led by the Natural Resources Conservation Service (NRCS) under the USDA; the Global Historical Climatology Network (<https://www.ncei.noaa.gov/products/land-based-station/global-historical-climatology-network-daily>; GHCN), coordinated by National Climatic Data Center at NOAA; the Daymet gridded estimates of daily weather parameters for North America, version 4, available from the Oak Ridge National Laboratory's Distributed Active Archive Center (<https://daymet.ornl.gov/>; DAAC); the International Tree Ring Data Bank; the National Land Cover Database (<https://www.mrlc.gov/>; NLCD); the Cropland Data Layer from the National Agricultural Statistics Service (<https://www.nass.usda.gov/Research_and_Science/Cropland/SARS1a.php>; NASS); and the PAD-US dataset of protected area boundaries (<https://www.usgs.gov/programs/gap-analysis-project/science/pad-us-data-overview>; USGS).
This package provides efficient methods to compute local and genome wide genetic distances (corresponding to the so called Hudson Fst parameters) through moment method, perform chromosome segmentation into homogeneous Fst genomic regions, and selection sweep detection for multi-population comparison. When multiple profile segmentation is required, the procedure can be parallelized using the future package.
Implementation of color palettes based on fish species.
FastGit <https://doc.fastgit.org/> works like a mirror of GitHub to make significant acceleration. fgitR is a package to do git operation with FastGit automatically.
This package implements the Factor-Augmented Clustering Tree (FACT) algorithm for clustering time series data. The method constructs a classification tree where splits are determined by covariates, and the splitting criterion is based on a group factor model representation of the time series within each node. Both threshold-based and permutation-based tests are supported for splitting decisions, with an option for parallel computation. For methodological details, see Hu, Li, Luo, and Wang (2025, in preparation), Factor-Augmented Clustering Tree for Time Series.
This package provides functions and example datasets for Fechnerian scaling of discrete object sets. User can compute Fechnerian distances among objects representing subjective dissimilarities, and other related information. See package?fechner for an overview.
The fxl Charting package is used to prepare and design single case design figures that are typically prepared in spreadsheet software. With fxl', there is no need to leave the R environment to prepare these works and many of the more unique conventions in single case experimental designs can be performed without the need for physically constructing features of plots (e.g., drawing annotations across plots). Support is provided for various different plotting arrangements (e.g., multiple baseline), annotations (e.g., brackets, arrows), and output formats (e.g., svg, rasters).
Data and functions for the book "Multivariate Statistical Modelling Based on Generalized Linear Models", first edition, by Ludwig Fahrmeir and Gerhard Tutz. Useful when using the book.
Helpers for parsing out the R functions and packages used in R scripts and notebooks.
Screens daily streamflow time series for temporal trends and change-points. This package has been primarily developed for assessing the quality of daily streamflow time series. It also contains tools for plotting and calculating many different streamflow metrics. The package can be used to produce summary screening plots showing change-points and significant temporal trends for high flow, low flow, and/or baseflow statistics, or it can be used to perform more detailed hydrological time series analyses. The package was designed for screening daily streamflow time series from Water Survey Canada and the United States Geological Survey but will also work with streamflow time series from many other agencies. Package update to version 2.0 made updates to read.flows function to allow loading of GRDC and ROBIN streamflow record formats. This package uses the `changepoint` package for change point detection. For more information on change point methods, see the changepoint package at <https://cran.r-project.org/package=changepoint>.