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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-janus 1.0.0
Propagated dependencies: r-tictoc@1.2.1 r-tensorflow@2.20.0 r-statrank@0.0.6 r-rmpfr@1.1-2 r-reticulate@1.44.1 r-readr@2.1.6 r-rcppalgos@2.9.3 r-purrr@1.2.0 r-narray@0.5.2 r-metrics@0.1.4 r-lubridate@1.9.4 r-keras@2.16.0 r-hash@2.2.6.3 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://rpubs.com/giancarlo_vercellino/janus
Licenses: GPL 3
Build system: r
Synopsis: Optimized Recommending System Based on 'tensorflow'
Description:

Proposes a coarse-to-fine optimization of a recommending system based on deep-neural networks using tensorflow'.

r-jackstrap 0.1.0
Propagated dependencies: r-tidyr@1.3.1 r-scales@1.4.0 r-rlang@1.1.6 r-reshape@0.8.10 r-plyr@1.8.9 r-ggplot2@4.0.1 r-foreach@1.5.2 r-fbasics@4041.97 r-dplyr@1.1.4 r-doparallel@1.0.17 r-benchmarking@0.33
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=jackstrap
Licenses: GPL 3
Build system: r
Synopsis: Correcting Nonparametric Frontier Measurements for Outliers
Description:

This package provides method used to check whether data have outlier in efficiency measurement of big samples with data envelopment analysis (DEA). In this jackstrap method, the package provides two criteria to define outliers: heaviside and k-s test. The technique was developed by Sousa and Stosic (2005) "Technical Efficiency of the Brazilian Municipalities: Correcting Nonparametric Frontier Measurements for Outliers." <doi:10.1007/s11123-005-4702-4>.

r-juicr 0.1
Propagated dependencies: r-xml@3.99-0.20 r-rcurl@1.98-1.17
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=juicr
Licenses: GPL 2+
Build system: r
Synopsis: Automated and Manual Extraction of Numerical Data from Scientific Images
Description:

This package provides a GUI interface for automating data extraction from multiple images containing scatter and bar plots, semi-automated tools to tinker with extraction attempts, and a fully-loaded point-and-click manual extractor with image zoom, calibrator, and classifier. Also provides detailed and R-independent extraction reports as fully-embedded .html records.

r-jmvreadwrite 0.4.12
Propagated dependencies: r-zip@2.3.3 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://sjentsch.github.io/jmvReadWrite/
Licenses: AGPL 3
Build system: r
Synopsis: Read and Write 'jamovi' Files ('.omv')
Description:

The free and open a statistical spreadsheet jamovi (<https://www.jamovi.org>) aims to make statistical analyses easy and intuitive. jamovi produces syntax that can directly be used in R (in connection with the R-package jmv'). Having import / export routines for the data files jamovi produces ('.omv') permits an easy transfer of data and analyses between jamovi and R.

r-jpinfect 2023.2026.02
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-stringr@1.6.0 r-stringi@1.8.7 r-readxl@1.4.5 r-readr@2.1.6 r-magrittr@2.0.4 r-isoweek@0.6-2 r-httr@1.4.7 r-future-apply@1.20.0 r-future@1.68.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/TomonoriHoshi/jpinfect
Licenses: GPL 3+
Build system: r
Synopsis: Acquiring and Processing Data from Japan Institute for Health Security
Description:

Download and post process the infectious disease case data from Japan Institute for Health Security. Also the package included ready-to-analyse datasets. See the data source website for further details <https://id-info.jihs.go.jp/>.

r-josae 0.3.0
Propagated dependencies: r-nlme@3.1-168
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JoSAE
Licenses: GPL 2
Build system: r
Synopsis: Unit-Level and Area-Level Small Area Estimation
Description:

Implementation of some unit and area level EBLUP estimators as well as the estimators of their MSE also under heteroscedasticity. The package further documents the publications Breidenbach and Astrup (2012) <DOI:10.1007/s10342-012-0596-7>, Breidenbach et al. (2016) <DOI:10.1016/j.rse.2015.07.026> and Breidenbach et al. (2018 in press). The vignette further explains the use of the implemented functions.

r-jcrimpactfactor 1.0.0
Propagated dependencies: r-stringr@1.6.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JCRImpactFactor
Licenses: GPL 3
Build system: r
Synopsis: Journal Citation Reports ('JCR') Impact Factor by 'Clarivate' 'Analytics'
Description:

The Impact Factor of a journal reported by Journal Citation Reports ('JCR') of Clarivate Analytics is provided. The impact factor is available for those journals only that were included Journal Citation Reports JCR'.

r-joinless 0.0.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=joinless
Licenses: GPL 3+
Build system: r
Synopsis: Exploratory Analysis of Relationships Between Variables
Description:

This package provides tools to explore and summarize relationship patterns between variables across one or multiple datasets. The package relies on efficient sampling strategies to estimate pairwise associations and supports quick exploratory data analysis for large or heterogeneous data sources.

r-joyn 0.3.0
Propagated dependencies: r-rlang@1.1.6 r-lifecycle@1.0.4 r-glue@1.8.0 r-data-table@1.17.8 r-collapse@2.1.5 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/randrescastaneda/joyn
Licenses: Expat
Build system: r
Synopsis: Tool for Diagnosis of Tables Joins and Complementary Join Features
Description:

Tool for diagnosing table joins. It combines the speed of `collapse` and `data.table`, the flexibility of `dplyr`, and the diagnosis and features of the `merge` command in `Stata`.

r-joiner 1.2.8
Propagated dependencies: r-survival@3.8-3 r-statmod@1.5.1 r-nlme@3.1-168 r-mass@7.3-65 r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/graemeleehickey/joineR/
Licenses: GPL 3 FSDG-compatible
Build system: r
Synopsis: Joint Modelling of Repeated Measurements and Time-to-Event Data
Description:

Analysis of repeated measurements and time-to-event data via random effects joint models. Fits the joint models proposed by Henderson and colleagues <doi:10.1093/biostatistics/1.4.465> (single event time) and by Williamson and colleagues (2008) <doi:10.1002/sim.3451> (competing risks events time) to a single continuous repeated measure. The time-to-event data is modelled using a (cause-specific) Cox proportional hazards regression model with time-varying covariates. The longitudinal outcome is modelled using a linear mixed effects model. The association is captured by a latent Gaussian process. The model is estimated using am Expectation Maximization algorithm. Some plotting functions and the variogram are also included. This project is funded by the Medical Research Council (Grant numbers G0400615 and MR/M013227/1).

r-jot 0.0.5
Propagated dependencies: r-yaml@2.3.10 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: http://christophertkenny.com/jot/
Licenses: Expat
Build system: r
Synopsis: Jot Down Values for Later
Description:

Reproducible work requires a record of where every statistic originated. When writing reports, some data is too big to load in the same environment and some statistics take a while to compute. This package offers a way to keep notes on statistics, simple functions, and small objects. Notepads can be locked to avoid accidental updates. Notepads keep track of who added the notes and when the notes were added. A simple text representation is used to allow for clear version histories.

r-journalr 0.6.0
Propagated dependencies: r-glue@1.8.0 r-data-table@1.17.8 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/epi-sam/journalR
Licenses: Expat
Build system: r
Synopsis: Formatting Tools for Scientific Journal Writing
Description:

Scientific journal numeric formatting policies implemented in code. Emphasis on formatting mean/upper/lower sets of values to pasteable text for journal submission. For example c(2e6, 1e6, 3e6) becomes "2.00 million (1.00--3.00)". Lancet and Nature have built-in styles for rounding and punctuation marks. Users may extend journal styles arbitrarily. Four metrics are supported; proportions, percentage points, counts and rates. Magnitudes for all metrics are discovered automatically.

r-jdenticon 0.1.1
Propagated dependencies: r-yesno@0.1.3 r-processx@3.8.6 r-magick@2.9.0 r-jsonlite@2.0.0 r-glue@1.8.0 r-fs@1.6.6
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=jdenticon
Licenses: Expat
Build system: r
Synopsis: Wrapper for the Node.js 'Jdenticon' Library
Description:

This package provides a Wrapper for the Node.js Jdenticon <https://jdenticon.com/> Library. Uses esbuild <https://esbuild.github.io/> to reduce user dependencies.

r-jointcomprisk 0.1.1
Propagated dependencies: r-survival@3.8-3 r-rlang@1.1.6 r-magrittr@2.0.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/cathyzzzhang/jointCompRisk
Licenses: Expat
Build system: r
Synopsis: Joint Inference for Competing Risks Data Using Multiple Endpoints
Description:

This package provides tools for competing risks trials that allow simultaneous inference on recovery and mortality endpoints. Provides data preparation helpers, standard cumulative incidence estimators (restricted mean time gained/lost), and severity weighted extensions that integrate longitudinal ordinal outcomes to summarise treatment benefit. Methods follow Wen, Hu, and Wang (2023) Biometrics 79(3):1635-1645 <doi:10.1111/biom.13752>.

r-japanstat 0.1.0
Propagated dependencies: r-vctrs@0.6.5 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stringi@1.8.7 r-rlang@1.1.6 r-purrr@1.2.0 r-progress@1.2.3 r-pillar@1.11.1 r-httr@1.4.7 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/UchidaMizuki/japanstat
Licenses: Expat
Build system: r
Synopsis: Tools for Easy Use of 'e-Stat' API
Description:

This package provides tools for using the API of e-Stat (<https://www.e-stat.go.jp/>), a portal site for Japanese government statistics. Includes functions for automatic query generation, data collection and formatting.

r-jaccard 0.1.2
Propagated dependencies: r-shiny@1.11.1 r-rcpp@1.1.0 r-qvalue@2.42.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=jaccard
Licenses: GPL 2
Build system: r
Synopsis: Testing Similarity Between Binary Datasets using Jaccard/Tanimoto Coefficients
Description:

Calculate statistical significance of Jaccard/Tanimoto similarity coefficients.

r-jti 1.0.0
Propagated dependencies: r-sparta@1.0.1 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-igraph@2.2.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/mlindsk/jti
Licenses: GPL 3
Build system: r
Synopsis: Junction Tree Inference
Description:

Minimal and memory efficient implementation of the junction tree algorithm using the Lauritzen-Spiegelhalter scheme; S. L. Lauritzen and D. J. Spiegelhalter (1988) <https://www.jstor.org/stable/2345762?seq=1>. The jti package is part of the paper <doi:10.18637/jss.v111.i02>.

r-jacobieigen 0.3-4
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JacobiEigen
Licenses: GPL 2+
Build system: r
Synopsis: Classical Jacobi Eigenvalue Algorithm
Description:

This package implements the classical Jacobi algorithm for the eigenvalues and eigenvectors of a real symmetric matrix, both in pure R and in C++ using Rcpp'. Mainly as a programming example for teaching purposes.

r-juliaformulae 0.1.0
Propagated dependencies: r-rrapply@1.2.8
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JuliaFormulae
Licenses: Expat
Build system: r
Synopsis: Translate R Regression Model Formulae to 'Julia' Syntax
Description:

Metaprogramming utilities for converting R regression model formulae to equivalents in Julia <doi:10.1137/141000671>, via modifications to the abstract syntax tree. Supports translations in zero correlation random effects syntax, protection of expressions to be evaluated as-is, interaction terms, and more. Accepts strings or R formula objects and returns modified R formula objects where possible (or a modified string, if not a valid formula in R).

r-jsdm 0.2.7
Dependencies: gsl@2.8
Propagated dependencies: r-stringi@1.8.7 r-rcppgsl@0.3.13 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-mass@7.3-65 r-foreach@1.5.2 r-doparallel@1.0.17 r-corrplot@0.95 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://ecology.ghislainv.fr/jSDM/
Licenses: GPL 3
Build system: r
Synopsis: Joint Species Distribution Models
Description:

Fits joint species distribution models ('jSDM') in a hierarchical Bayesian framework (Warton and al. 2015 <doi:10.1016/j.tree.2015.09.007>). The Gibbs sampler is written in C++'. It uses Rcpp', Armadillo and GSL to maximize computation efficiency.

r-julia 1.3.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/msuzen/Julia
Licenses: GPL 3
Build system: r
Synopsis: Fractal Image Data Generator
Description:

Generates image data for fractals (Julia and Mandelbrot sets) on the complex plane in the given region and resolution. Benoit B Mandelbrot (1982).

r-jointseg 1.0.3
Propagated dependencies: r-matrixstats@1.5.0 r-dnacopy@1.84.0 r-acnr@1.0.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/mpierrejean/jointseg
Licenses: LGPL 2.1+
Build system: r
Synopsis: Joint Segmentation of Multivariate (Copy Number) Signals
Description:

This package provides methods for fast segmentation of multivariate signals into piecewise constant profiles and for generating realistic copy-number profiles. A typical application is the joint segmentation of total DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, Rigaill and Neuvial (2015) <doi:10.1093/bib/bbu026>.

r-jmvcore 2.7.7
Propagated dependencies: r-rlang@1.1.6 r-r6@2.6.1 r-jsonlite@2.0.0 r-base64enc@0.1-3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://www.jamovi.org
Licenses: GPL 2+
Build system: r
Synopsis: Dependencies for the 'jamovi' Framework
Description:

This package provides a framework for creating rich interactive analyses for the jamovi platform (see <https://www.jamovi.org> for more information).

r-jatsdecoder 1.2.2
Propagated dependencies: r-opennlp@0.2-7 r-nlp@0.3-2
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/ingmarboeschen/JATSdecoder
Licenses: GPL 3
Build system: r
Synopsis: Metadata and Text Extraction and Manipulation Tool Set
Description:

This package provides a function collection to extract metadata, sectioned text and study characteristics from scientific articles in NISO-JATS format. Articles in PDF format can be converted to NISO-JATS with the Content ExtRactor and MINEr ('CERMINE', <https://github.com/CeON/CERMINE>). For convenience, two functions bundle the extraction heuristics: JATSdecoder() converts NISO-JATS'-tagged XML files to a structured list with elements title, author, journal, history, DOI', abstract, sectioned text and reference list. study.character() extracts multiple study characteristics like number of included studies, statistical methods used, alpha error, power, statistical results, correction method for multiple testing, software used. The function get.stats() extracts all statistical results from text and recomputes p-values for many standard test statistics. It performs a consistency check of the reported with the recalculated p-values. An estimation of the involved sample size is performed based on textual reports within the abstract and the reported degrees of freedom within statistical results. In addition, the package contains some useful functions to process text (text2sentences(), text2num(), ngram(), strsplit2(), grep2()). See Böschen, I. (2021) <doi:10.1007/s11192-021-04162-z> Böschen, I. (2021) <doi:10.1038/s41598-021-98782-3>, Böschen, I. (2023) <doi:10.1038/s41598-022-27085-y>, and Böschen, I. (2024) <doi:10.48550/arXiv.2408.07948>.

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