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Interfaces R with LSD simulation models. Reads object-oriented data in results files (.res[.gz]) produced by LSD and creates appropriate multi-dimensional arrays in R. Supports multiple core parallel threads of multi-file data reading for increased performance. Also provides functions to extract basic information and statistics from data files. LSD (Laboratory for Simulation Development) is free software developed by Marco Valente and Marcelo C. Pereira (documentation and downloads available at <https://www.labsimdev.org/>).
It uses phenological and productivity-related variables derived from time series of vegetation indexes, such as the Normalized Difference Vegetation Index, to assess ecosystem dynamics and change, which eventually might drive to land degradation. The final result of the Land Productivity Dynamics indicator is a categorical map with 5 classes of land productivity dynamics, ranging from declining to increasing productivity. See www.sciencedirect.com/science/article/pii/S1470160X21010517/ for a description of the methods used in the package to calculate the indicator.
The programs were developed for estimation of parameters and testing exponential versus Pareto distribution during our work on hydrologic extremes. See Kozubowski, T.J., A.K. Panorska, F. Qeadan, and A. Gershunov (2007) <doi:10.1080/03610910802439121>, and Panorska, A.K., A. Gershunov, and T.J. Kozubowski (2007) <doi:10.1007/978-0-387-34918-3_26>.
Maximum likelihood estimation and likelihood ratio test are essential for modern statistics. This package supports in calculating likelihood based inference. Reference: Pawitan Y. (2001, ISBN:0-19-850765-8).
This package provides methods for fitting log-link GLMs and GAMs to binomial data, including EM-type algorithms with more stable convergence properties than standard methods.
When building complex models, it is often difficult to explain why the model should be trusted. While global measures such as accuracy are useful, they cannot be used for explaining why a model made a specific prediction. lime (a port of the lime Python package) is a method for explaining the outcome of black box models by fitting a local model around the point in question an perturbations of this point. The approach is described in more detail in the article by Ribeiro et al. (2016) <doi:10.48550/arXiv.1602.04938>.
This package provides a set of all-cause and cause-specific life expectancy sensitivity and decomposition methods, including Arriaga (1984) <doi:10.2307/2061029>, others documented by Ponnapalli (2005) <doi:10.4054/DemRes.2005.12.7>, lifetable, numerical, and other algorithmic approaches such as Horiuchi et al (2008) <doi:10.1353/dem.0.0033>, or Andreev et al (2002) <doi:10.4054/DemRes.2002.7.14>.
Analysis of stock data ups and downs trend, the stock technical analysis indicators function have trend line, reversal pattern and market trend.
This package provides functions to estimate and visualize linear as well as nonlinear impulse responses based on local projections by Jordà (2005) <doi:10.1257/0002828053828518>. The methods and the package are explained in detail in Adämmer (2019) <doi:10.32614/RJ-2019-052>.
This package provides tools for performing Bayesian inference on epidemiological data to estimate the time-varying reproductive number and other related metrics. These methods were published in Li and White (2021) <doi:10.1371/journal.pcbi.1009210>. This package supports analyses based on aggregated case count data and individual line list data, facilitating enhanced surveillance and intervention planning for infectious diseases like COVID-19.
Dati, scripts e funzioni per il libro "Ricerca sociale con R. Concetti e funzioni base per la ricerca sociale" (Datasets, scripts and functions to support the book "Ricerca sociale con R. Concetti e funzioni base per la ricerca sociale").
Changes of landscape diversity and structure can be detected soon if relying on landscape class combinations and analysing patterns at multiple scales. LandComp provides such an opportunity, based on Juhász-Nagy's functions (Juhász-Nagy P, Podani J 1983 <doi:10.1007/BF00129432>). Functions can handle multilayered data. Requirements of the input: binary data contained by a regular square or hexagonal grid, and the grid should have projected coordinates.
The Gaussian location-scale regression model is a multi-predictor model with explanatory variables for the mean (= location) and the standard deviation (= scale) of a response variable. This package implements maximum likelihood and Markov chain Monte Carlo (MCMC) inference (using algorithms from Girolami and Calderhead (2011) <doi:10.1111/j.1467-9868.2010.00765.x> and Nesterov (2009) <doi:10.1007/s10107-007-0149-x>), a parametric bootstrap algorithm, and diagnostic plots for the model class.
Computations related to group sequential boundaries. Includes calculation of bounds using the Lan-DeMets alpha spending function approach. Based on FORTRAN program ld98 implemented by Reboussin, et al. (2000) <doi:10.1016/s0197-2456(00)00057-x>.
This package performs approximate GP regression for large computer experiments and spatial datasets. The approximation is based on finding small local designs for prediction (independently) at particular inputs. OpenMP and SNOW parallelization are supported for prediction over a vast out-of-sample testing set; GPU acceleration is also supported for an important subroutine. OpenMP and GPU features may require special compilation. An interface to lower-level (full) GP inference and prediction is provided. Wrapper routines for blackbox optimization under mixed equality and inequality constraints via an augmented Lagrangian scheme, and for large scale computer model calibration, are also provided. For details and tutorial, see Gramacy (2016 <doi:10.18637/jss.v072.i01>.
Whole-buffer DEFLATE-based compression and decompression of raw vectors using the libdeflate library (see <https://github.com/ebiggers/libdeflate>). Provides the user with additional control over the speed and the quality of DEFLATE compression compared to the fixed level of compression offered in R's memCompress() function. Also provides the libdeflate static library and C headers along with a CMake target and packageâ config file that ease linking of libdeflate in packages that compile and statically link bundled libraries using CMake'.
This package provides utilities to detect common data leakage patterns including train/test contamination, temporal leakage, and data duplication, enhancing model reliability and reproducibility in machine learning workflows. Generates diagnostic reports and visual summaries to support data validation. Methods based on best practices from Hastie, Tibshirani, and Friedman (2009, ISBN:978-0387848570).
This package implements bootstrap methods for linear regression models with errors following a time-varying process, focusing on approximating the distribution of the least-squares estimator for regression models with locally stationary errors. It enables the construction of bootstrap and classical confidence intervals for regression coefficients, leveraging intensive simulation studies and real data analysis.
This package provides a set of functions and tools to conduct acoustic source localization, as well as organize and check localization data and results. The localization functions implement the modified steered response power algorithm described by Cobos et al. (2010) <doi:10.1109/LSP.2010.2091502>.
R6 classes to model traditional life insurance contracts like annuities, whole life insurances or endowments. Such life insurance contracts provide a guaranteed interest and are not directly linked to the performance of a particular investment vehicle, but they typically provide (discretionary) profit participation. This package provides a framework to model such contracts in a very generic (cash-flow-based) way and includes modelling profit participation schemes, dynamic increases or more general contract layers, as well as contract changes (like sum increases or premium waivers). All relevant quantities like premium decomposition, reserves and benefits over the whole contract period are calculated and potentially exported to Excel'. Mortality rates are given using the MortalityTables package.
This package performs recursive partitioning of linear and nonlinear mixed effects models, specifically for longitudinal data. The package is an extension of the original longRPart package by Stewart and Abdolell (2013) <https://cran.r-project.org/package=longRPart>.
This package provides the tables from the Sean Lahman Baseball Database as a set of R data.frames. It uses the data on pitching, hitting and fielding performance and other tables from 1871 through 2024, as recorded in the 2025 version of the database. Documentation examples show how many baseball questions can be investigated.
Solves quadratic programming problems where the Hessian is represented as the product of two matrices. Thanks to Greg Hunt for helping getting this version back on CRAN. The methods in this package are described in: Ormerod, Wand and Koch (2008) "Penalised spline support vector classifiers: computational issues" <doi:10.1007/s00180-007-0102-8>.
Add and modify small charts on an interactive map created with package leaflet'. These charts can be used to represent at same time multiple variables on a single map.