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The new QOI file format offers a very simple but efficient image compression algorithm. This package provides an easy and simple way to read, write and display bitmap images stored in the QOI (Quite Ok Image) format. It can read and write both files and in-memory raw vectors.
Quality of care is compared across accountable entities, including hospitals, provider groups, and insurance plans, using standardized quality measures. However, observed variations in quality measure performance might be the result of chance sampling or measurement errors. Contains functions for estimating the reliability of unadjusted and risk-standardized quality measures.
Create surface forms from matrix or raster data for flexible plotting and conversion to other mesh types. The functions quadmesh or triangmesh produce a continuous surface as a mesh3d object as used by the rgl package. This is used for plotting raster data in 3D (optionally with texture), and allows the application of a map projection without data loss and many processing applications that are restricted by inflexible regular grid rasters. There are discrete forms of these continuous surfaces available with dquadmesh and dtriangmesh functions.
Conduct multiple quantitative trait loci (QTL) mapping under the framework of random-QTL-effect linear mixed model. First, each position on the genome is detected in order to obtain a negative logarithm P-value curve against genome position. Then, all the peaks on each effect (additive or dominant) curve are viewed as potential QTL, all the effects of the potential QTL are included in a multi-QTL model, their effects are estimated by empirical Bayes in doubled haploid population or by adaptive lasso in F2 population, and true QTL are identified by likelihood radio test. See Wen et al. (2018) <doi:10.1093/bib/bby058>.
The queueing model of visual search models the accuracy and response time data in a visual search experiment using queueing models with finite customer population and stopping criteria of completing the service for finite number of customers. It implements the conceptualization of a hybrid model proposed by Moore and Wolfe (2001), in which visual stimuli enter the processing one after the other and then are identified in parallel. This package provides functions that simulate the specified queueing process and calculate the Wasserstein distance between the empirical response times and the model prediction.
This package provides a quantum computer simulator framework with up to 24 qubits. It allows to define general single qubit gates and general controlled single qubit gates. For convenience, it currently provides the most common gates (X, Y, Z, H, Z, S, T, Rx, Ry, Rz, CNOT, SWAP, Toffoli or CCNOT, Fredkin or CSWAP). qsimulatR also implements noise models. qsimulatR supports plotting of circuits and is able to export circuits to Qiskit <https://qiskit.org/>, a python package which can be used to run on IBM's hardware <https://quantum-computing.ibm.com/>.
Code for centroid, median and quantile classifiers.
Implementation of quantile frequency analysis (QFA) for time series based on trigonometric quantile regression and of spline quantile regression (SQR) for estimating the coefficients in linear quantile regression models as smooth functions of the quantile level. References: [1] Li, T.-H. (2012). Quantile periodograms, J. of the American Statistical Association, 107, 765â 776. <doi:10.1080/01621459.2012.682815> [2] Li, T.-H. (2014). Time Series with Mixed Spectra, CRC Press. <doi:10.1201/b15154> [3] Li, T.-H. (2025). Quantile Fourier transform, quantile series, and nonparametric estimation of quantile spectra, Communications in Statistics: Simulation and Computation, 1â 22. <doi:10.1080/03610918.2025.2509820> [4] Li, T.-H. (2025). Quantile-crossing spectrum and spline autoregression estimation, Statistical Inference for Stochastic Processes, 28, 20. <doi:10.1007/s11203-025-09336-7> [5] Li, T.-H. (2025). Spline autoregression method for estimation of quantile spectrum, J. of Computational and Graphical Statistics, 1-15. <doi:10.1080/10618600.2025.2549452> [6] Li, T.-H., and Megiddo, N. (2026). Spline quantile regression, J. of Statistical Theory and Practice, 20, 30. <doi:10.1007/s42519-026-00545-8> [7] Li, T.-H. (2026). Spline quantile regression with cubic and linear smoothing splines, <doi:10.48550/arXiv.2603.22408>.
Analysis of Q methodology, used to identify distinct perspectives existing within a group. This methodology is used across social, health and environmental sciences to understand diversity of attitudes, discourses, or decision-making styles (for more information, see <https://qmethod.org/>). A single function runs the full analysis. Each step can be run separately using the corresponding functions: for automatic flagging of Q-sorts (manual flagging is optional), for statement scores, for distinguishing and consensus statements, and for general characteristics of the factors. The package allows to choose either principal components or centroid factor extraction, manual or automatic flagging, a number of mathematical methods for rotation (or none), and a number of correlation coefficients for the initial correlation matrix, among many other options. Additional functions are available to import and export data (from raw *.CSV, HTMLQ and FlashQ *.CSV, PQMethod *.DAT and easy-htmlq *.JSON files), to print and plot, to import raw data from individual *.CSV files, and to make printable cards. The package also offers functions to print Q cards and to generate Q distributions for study administration. See further details in the package documentation, and in the web pages below, which include a cookbook, guidelines for more advanced analysis (how to perform manual flagging or change the sign of factors), data management, and a graphical user interface (GUI) for online and offline use.
Quantile regression (QR) for Linear Mixed-Effects Models via the asymmetric Laplace distribution (ALD). It uses the Stochastic Approximation of the EM (SAEM) algorithm for deriving exact maximum likelihood estimates and full inference results for the fixed-effects and variance components. It also provides graphical summaries for assessing the algorithm convergence and fitting results.
This package provides helper functions to work programmatically within a Quarto document. It allows the user to create section headers, tabsets, divs, and spans, and formats these objects into Quarto syntax when printed into a document.
This package provides a collection of tools associated with the qdap package that may be useful outside of the context of text analysis.
Support package for the textbook "An Introduction to Quantitative Text Analysis for Linguists: Reproducible Research Using R" (Francom, 2024) <doi:10.4324/9781003393764>. Includes functions to acquire, clean, and analyze text data as well as functions to document and share the results of text analysis. The package is designed to be used in conjunction with the book, but can also be used as a standalone package for text analysis.
This function performs QR factorization without pivoting to a real or complex matrix. It is based on Anderson. E. and ten others (1999) "LAPACK Users Guide". Third Edition. SIAM.
Densitometric evaluation of the photo-archived quantitative thin-layer chromatography (TLC) plates.
Non-parametric methods as local normal regression, polynomial local regression and penalized cubic B-splines regression are used to estimate quantiles curves. See Fan and Gijbels (1996) <doi:10.1201/9780203748725> and Perperoglou et al.(2019) <doi:10.1186/s12874-019-0666-3>.
Helps to perform linear regression analysis by reducing manual effort. Reduces the independent variables based on specified p-value and Variance Inflation Factor (VIF) level.
This package provides a re-implementation of quantile kriging. Quantile kriging was described by Plumlee and Tuo (2014) <doi:10.1080/00401706.2013.860919>. With computational savings when dealing with replication from the recent paper by Binois, Gramacy, and Ludovski (2018) <doi:10.1080/10618600.2018.1458625> it is now possible to apply quantile kriging to a wider class of problems. In addition to fitting the model, other useful tools are provided such as the ability to automatically perform leave-one-out cross validation.
Dynamically generate tabset panels <https://quarto.org/docs/output-formats/html-basics.html#tabsets> in Quarto HTML documents using a data frame as input.
Collect your data on digital marketing campaigns from Quora Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.
This package provides functions to manipulate dates and count days for quantitative finance analysis. The quantdates package considers leap, holidays and business days for relevant calendars in a financial context to simplify quantitative finance calculations, consistent with International Swaps and Derivatives Association (ISDA) (2006) <https://www.isda.org/book/2006-isda-definitions/> regulations.
Implementation of a computationally efficient method for simulating queues with arbitrary arrival and service times. Please see Ebert, Wu, Mengersen & Ruggeri (2020, <doi:10.18637/jss.v095.i05>) for further details.
This package provides the function qqtest which incorporates uncertainty in its qqplot display(s) so that the user might have a better sense of the evidence against the specified distributional hypothesis. qqtest draws a quantile quantile plot for visually assessing whether the data come from a test distribution that has been defined in one of many ways. The vertical axis plots the data quantiles, the horizontal those of a test distribution. The default behaviour generates 1000 samples from the test distribution and overlays the plot with shaded pointwise interval estimates for the ordered quantiles from the test distribution. A small number of independently generated exemplar quantile plots can also be overlaid. Both the interval estimates and the exemplars provide different comparative information to assess the evidence provided by the qqplot for or against the hypothesis that the data come from the test distribution (default is normal or gaussian). Finally, a visual test of significance (a lineup plot) can also be displayed to test the null hypothesis that the data come from the test distribution.
Integration of the units and errors packages for a complete quantity calculus system for R vectors, matrices and arrays, with automatic propagation, conversion, derivation and simplification of magnitudes and uncertainties. Documentation about units and errors is provided in the papers by Pebesma, Mailund & Hiebert (2016, <doi:10.32614/RJ-2016-061>) and by Ucar, Pebesma & Azcorra (2018, <doi:10.32614/RJ-2018-075>), included in those packages as vignettes; see citation("quantities") for details.