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This package implements solutions to canonical models of Economics such as Monopoly Profit Maximization, Cournot's Duopoly, Solow (1956, <doi:10.2307/1884513>) growth model and Mankiw, Romer and Weil (1992, <doi:10.2307/2118477>) growth model.
This package provides a compact R interface for performing tensor calculations. This is achieved by allowing (upper and lower) index labeling of arrays and making use of Ricci calculus conventions to implicitly trigger contractions and diagonal subsetting. Explicit tensor operations, such as addition, subtraction and multiplication of tensors via the standard operators, raising and lowering indices, taking symmetric or antisymmetric tensor parts, as well as the Kronecker product are available. Common tensors like the Kronecker delta, Levi Civita epsilon, certain metric tensors, the Christoffel symbols, the Riemann as well as Ricci tensors are provided. The covariant derivative of tensor fields with respect to any metric tensor can be evaluated. An effort was made to provide the user with useful error messages.
These functions take a character vector as input, identify and cluster similar values, and then merge clusters together so their values become identical. The functions are an implementation of the key collision and ngram fingerprint algorithms from the open source tool Open Refine <https://openrefine.org/>. More info on key collision and ngram fingerprint can be found here <https://openrefine.org/docs/technical-reference/clustering-in-depth>.
This package provides tools are provided for estimating, testing, and simulating abundance in a two-event (Petersen) mark-recapture experiment. Functions are given to calculate the Petersen, Chapman, and Bailey estimators and associated variances. However, the principal utility is a set of functions to simulate random draws from these estimators, and use these to conduct hypothesis tests and power calculations. Additionally, a set of functions are provided for generating confidence intervals via bootstrapping. Functions are also provided to test abundance estimator consistency under complete or partial stratification, and to calculate stratified or partially stratified estimators. Functions are also provided to calculate recommended sample sizes. Referenced methods can be found in Arnason et al. (1996) <ISSN:0706-6457>, Bailey (1951) <DOI:10.2307/2332575>, Bailey (1952) <DOI:10.2307/1913>, Chapman (1951) NAID:20001644490, Cohen (1988) ISBN:0-12-179060-6, Darroch (1961) <DOI:10.2307/2332748>, and Robson and Regier (1964) <ISSN:1548-8659>.
Discretize AR(1) process following Tauchen (1986) <http://www.sciencedirect.com/science/article/pii/0165176586901680>. A discrete Markov chain that approximates in the sense of weak convergence a continuous-valued univariate Autoregressive process of first order is generated. It is a popular method used in economics and in finance.
Data objects in R can be rendered as HTML tables using the JavaScript library ag-grid (typically via R Markdown or Shiny'). The ag-grid library has been included in this R package. The package name RagGrid is an abbreviation of R agGrid'.
Efficient diffusing of content across function documentations. Sections, parameters or dot parameters are extracted from function documentations and turned into valid Rd character strings, which are ready to diffuse into the roxygen comments of another function by inserting inline code.
Takes Poisson or Binomial discrete spatial data and runs a Gibbs sampler for a variety of Spatiotemporal Conditional Autoregressive (CAR) models. Includes measures to prevent estimate over-smoothing through a restriction of model informativeness for select models. Also provides tools to load output and get median estimates. Implements methods from Besag, York, and Mollié (1991) "Bayesian image restoration, with two applications in spatial statistics" <doi:10.1007/BF00116466>, Gelfand and Vounatsou (2003) "Proper multivariate conditional autoregressive models for spatial data analysis" <doi:10.1093/biostatistics/4.1.11>, Quick et al. (2017) "Multivariate spatiotemporal modeling of age-specific stroke mortality" <doi:10.1214/17-AOAS1068>, and Quick et al. (2021) "Evaluating the informativeness of the Besag-York-Mollié CAR model" <doi:10.1016/j.sste.2021.100420>.
This package provides a set of tools to explore the behaviour statistics used for forensic DNA interpretation when close relatives are involved. The package also offers some useful tools for exploring other forensic DNA situations.
The parametric Bayes analysis for the restricted mean survival time (RMST) with cluster effect, as described in Hanada and Kojima (2024) <doi:10.48550/arXiv.2406.06071>. Bayes estimation with random-effect and frailty-effect can be applied to several parametric models useful in survival time analysis. The RMST under these parametric models can be computed from the obtained posterior samples.
The Function performs a parallel analysis using simulated polychoric correlation matrices. The nth-percentile of the eigenvalues distribution obtained from both the randomly generated and the real data polychoric correlation matrices is returned. A plot comparing the two types of eigenvalues (real and simulated) will help determine the number of real eigenvalues that outperform random data. The function is based on the idea that if real data are non-normal and the polychoric correlation matrix is needed to perform a Factor Analysis, then the Parallel Analysis method used to choose a non-random number of factors should also be based on randomly generated polychoric correlation matrices and not on Pearson correlation matrices. Random data sets are simulated assuming or a uniform or a multinomial distribution or via the bootstrap method of resampling (i.e., random permutations of cases). Also Multigroup Parallel analysis is made available for random (uniform and multinomial distribution and with or without difficulty factor) and bootstrap methods. An option to choose between default or full output is also available as well as a parameter to print Fit Statistics (Chi-squared, TLI, RMSEA, RMR and BIC) for the factor solutions indicated by the Parallel Analysis. Also weighted correlation matrices may be considered for PA.
Standards and implementations disagree about what an IP address literal means: the string "0177.0.0.1" is rejected by the dotted-quad grammar, read as 127.0.0.1 by browsers, and read as 177.0.0.1 by some inet_pton implementations. Most libraries pick one reading and discard the rest. This package reports them all, alongside the reason codes that explain each one, and classifies parsed values against the IANA special-purpose address registries. It is pure R, performs no network access, and returns facts rather than allow or deny verdicts.
Measure single-storage water supply system performance using resilience, reliability, and vulnerability metrics; assess storage-yield-reliability relationships; determine no-fail storage with sequent peak analysis; optimize release decisions for water supply, hydropower, and multi-objective reservoirs using deterministic and stochastic dynamic programming; generate inflow replicates using parametric and non-parametric models; evaluate inflow persistence using the Hurst coefficient.
This package implements the empirical Bayes ranking method described in Henderson and Hartman (2025) <doi:10.48550/arXiv.2511.16530>. The data structure of interest is a collection of cluster-specific effect size estimates, associated standard errors for these estimates, and cluster-level covariates. Estimates of the rankings of the cluster-specific effect sizes after adjusting for cluster-level covariates are generated.
This package provides an implementation of Regularized LS-TreeBoost & LAD-TreeBoost algorithm for Regulatory Network inference from any type of expression data (Microarray/RNA-seq etc).
The Resource Description Framework, or RDF is a widely used data representation model that forms the cornerstone of the Semantic Web. RDF represents data as a graph rather than the familiar data table or rectangle of relational databases. The rdflib package provides a friendly and concise user interface for performing common tasks on RDF data, such as reading, writing and converting between the various serializations of RDF data, including rdfxml', turtle', nquads', ntriples', and json-ld'; creating new RDF graphs, and performing graph queries using SPARQL'. This package wraps the low level redland R package which provides direct bindings to the redland C library. Additionally, the package supports the newer and more developer friendly JSON-LD format through the jsonld package. The package interface takes inspiration from the Python rdflib library.
Systematic conservation prioritization with robust optimization techniques. This is important because conservation prioritizations typically only consider the most likely outcome associated with a conservation action (e.g., establishing a protected area will safeguard a threatened species population) and fail to consider other outcomes and their consequences for meeting conservation objectives. By extending the prioritizr package, this package can be used to generate conservation prioritizations that account of uncertainty in the climate change scenario projections, species distribution models, ecosystem service models, and measurement errors. In particular, prioritizations can be generated to be fully robust to uncertainty by minimizing (or maximizing) objectives under the worst possible outcome. Since reducing the uncertainty associated with achieving conservation objectives may sacrifice other objectives (e.g., minimizing protected area implementation costs), prioritizations can also be generated to be partially robust based on a specified confidence level parameter. Partially robust prioritizations can be generated based on the chance constrained programming problem (Charnes & Cooper 1959, <doi:10.1287/mnsc.6.1.73>) and the conditional value-at-risk problem (Rockafellar & Uryasev 2000, <doi:10.21314/JOR.2000.038>).
This package provides functions to construct efficient row-column designs for 3-level factorial experiments in 3 rows. The designs ensure the estimation of all main effects (full efficiency) and two factor interactions in minimum replications. For more details, see Dey, A. and Mukerjee, R. (2012) <doi:10.1016/j.spl.2012.06.014> and Dash, S., Parsad, R., and Gupta, V. K. (2013) <doi:10.1007/s40003-013-0059-5>.
Quickly computes polygenic scores from GWAS summary statistics of either case-control or quantitative traits without parameter tuning. Reales,G., Vigorito, E., Kelemen,M., Wallace,C. (2021) <doi:10.1101/2020.07.24.220392> "RápidoPGS: A rapid polygenic score calculator for summary GWAS data without a test dataset".
Routines to interact with the Numerai Machine Learning Tournament API <https://numer.ai>. The functionality includes the ability to automatically download the current tournament data, submit predictions, and to get information for your user.
R wrapper for the JPMML-R library <https://github.com/jpmml/jpmml-r>, which converts R models to Predictive Model Markup Language ('PMML').
It fires a query to the API to get the unsampled data in R for Google Analytics Premium Accounts. It retrieves data from the Google drive document and stores it into the local drive. The path to the excel file is returned by this package. The user can read data from the excel file into R using read.csv() function.
Toolbox for remote sensing image processing and analysis such as calculating spectral indexes, principal component transformation, unsupervised and supervised classification or fractional cover analyses.
Offers bathymetric interpolation using Inverse Distance Weighted and Ordinary Kriging via the gstat and terra packages. Other functions focus on quantifying physical aquatic habitats (e.g., littoral, epliminion, metalimnion, hypolimnion) from interpolated digital elevation models (DEMs). Functions were designed to calculate these metrics across water levels for use in reservoirs but can be applied to any DEM and will provide values for fixed conditions. Parameters like Secchi disk depth or estimated photic zone, thermocline depth, and water level fluctuation depth are included in most functions.