_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-shinydbauth 1.0.0.1
Propagated dependencies: r-yaml@2.3.10 r-shiny@1.11.1 r-scrypt@0.1.6 r-r6@2.6.1 r-r-utils@2.13.0 r-openssl@2.3.4 r-htmltools@0.5.8.1 r-glue@1.8.0 r-dt@0.34.0 r-billboarder@0.5.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/diegoefe/shinydbauth
Licenses: GPL 3
Build system: r
Synopsis: Simple Authentification for 'shiny' Applications
Description:

This package provides a simple authentification mechanism for single shiny applications. Authentification and password change functionality are performed calling user provided functions that typically access some database backend. Source code of main applications is protected until authentication is successful.

r-semicontmanova 0.2
Propagated dependencies: r-mvtnorm@1.3-3 r-matrixcalc@1.0-6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=semicontMANOVA
Licenses: GPL 2
Build system: r
Synopsis: Multivariate ANalysis of VAriance with Ridge Regularization for Semicontinuous High-Dimensional Data
Description:

This package implements Multivariate ANalysis Of VAriance (MANOVA) parameters inference and test with regularization for semicontinuous high-dimensional data. The method can be applied also in presence of low-dimensional data. The p-value can be obtained through asymptotic distribution or using a permutation procedure. The package gives also the possibility to simulate this type of data. Method is described in Elena Sabbioni, Claudio Agostinelli and Alessio Farcomeni (2025) A regularized MANOVA test for semicontinuous high-dimensional data. Biometrical Journal, 67:e70054. DOI <doi:10.1002/bimj.70054>, arXiv DOI <doi:10.48550/arXiv.2401.04036>.

r-sigclust 1.1.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sigclust
Licenses: GPL 2+
Build system: r
Synopsis: Statistical Significance of Clustering
Description:

SigClust is a statistical method for testing the significance of clustering results. SigClust can be applied to assess the statistical significance of splitting a data set into two clusters. For more than two clusters, SigClust can be used iteratively.

r-slcm 0.1.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-edmdata@1.3.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://tmsalab.github.io/slcm/
Licenses: GPL 2+
Build system: r
Synopsis: Sparse Latent Class Model for Cognitive Diagnosis
Description:

Perform a Bayesian estimation of the exploratory Sparse Latent Class Model for Binary Data described by Chen, Y., Culpepper, S. A., and Liang, F. (2020) <doi:10.1007/s11336-019-09693-2>.

r-squash 1.0.9
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/aroneklund/squash
Licenses: Artistic License 2.0
Build system: r
Synopsis: Color-Based Plots for Multivariate Visualization
Description:

This package provides functions for color-based visualization of multivariate data, i.e. colorgrams or heatmaps. Lower-level functions map numeric values to colors, display a matrix as an array of colors, and draw color keys. Higher-level plotting functions generate a bivariate histogram, a dendrogram aligned with a color-coded matrix, a triangular distance matrix, and more.

r-sqlformatter 0.0.2
Propagated dependencies: r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://dataupsurge.github.io/SQLFormatteR/
Licenses: Expat
Build system: r
Synopsis: Format SQL Queries
Description:

This package provides a convenient interface for formatting SQL queries directly within R'. It acts as a wrapper around the sql_format Rust crate. The package allows you to format SQL code with customizable options, including indentation, case formatting, and more, ensuring your SQL queries are clean, readable, and consistent.

r-songevo 1.0.0
Propagated dependencies: r-sp@2.2-0 r-lattice@0.22-7 r-geosphere@1.5-20 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SongEvo
Licenses: GPL 3
Build system: r
Synopsis: An Individual-Based Model of Bird Song Evolution
Description:

Simulates the cultural evolution of quantitative traits of bird song. SongEvo is an individual- (agent-) based model. SongEvo is spatially-explicit and can be parameterized with, and tested against, measured song data. Functions are available for model implementation, sensitivity analyses, parameter optimization, model validation, and hypothesis testing.

r-swirlify 0.5.3
Propagated dependencies: r-yaml@2.3.10 r-whisker@0.4.1 r-swirl@2.4.5 r-stringr@1.6.0 r-shinyace@0.4.4 r-shiny@1.11.1 r-rmarkdown@2.30 r-readr@2.1.6 r-base64enc@0.1-3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: http://swirlstats.com
Licenses: Expat
Build system: r
Synopsis: Toolbox for Writing 'swirl' Courses
Description:

This package provides a set of tools for writing and sharing interactive courses to be used with swirl.

r-surrogaterank 2.2
Propagated dependencies: r-pbmcapply@1.5.1 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SurrogateRank
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Rank-Based Test to Evaluate a Surrogate Marker
Description:

Uses a novel rank-based nonparametric approach to evaluate a surrogate marker in a small sample size setting. Details are described in Parast et al (2024) <doi:10.1093/biomtc/ujad035> and Hughes A et al (2025) <doi:10.1002/sim.70241>. A tutorial for this package can be found at <https://www.laylaparast.com/surrogaterank> and a Shiny App implementing the package can be found at <https://parastlab.shinyapps.io/SurrogateRankApp/>.

r-shelter 0.2.1
Propagated dependencies: r-yaml@2.3.10 r-sodium@1.4.0 r-rappdirs@0.3.3 r-getpass@0.2-4 r-filelock@1.0.3 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/vubiostat/shelter
Licenses: GPL 3
Build system: r
Synopsis: Support for Secure API Key Management
Description:

Secure handling of API keys can be difficult. This package provides secure convenience functions for entering / handling API keys and opening connections via inversion of control on those keys. Works seamlessly between production and developer environments.

r-scitd 1.0.4
Propagated dependencies: r-sva@3.58.0 r-sccore@1.0.6 r-rtensor@1.4.9 r-rmisc@1.5.1 r-reshape2@1.4.5 r-rcppprogress@0.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-rcolorbrewer@1.1-3 r-nmf@0.28 r-msigdbr@25.1.1 r-mgcv@1.9-4 r-matrix@1.7-4 r-ica@1.0-3 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-fgsea@1.36.0 r-edger@4.8.0 r-dplyr@1.1.4 r-complexheatmap@2.26.0 r-circlize@0.4.16
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=scITD
Licenses: GPL 3
Build system: r
Synopsis: Single-Cell Interpretable Tensor Decomposition
Description:

Single-cell Interpretable Tensor Decomposition (scITD) employs the Tucker tensor decomposition to extract multicell-type gene expression patterns that vary across donors/individuals. This tool is geared for use with single-cell RNA-sequencing datasets consisting of many source donors. The method has a wide range of potential applications, including the study of inter-individual variation at the population-level, patient sub-grouping/stratification, and the analysis of sample-level batch effects. Each "multicellular process" that is extracted consists of (A) a multi cell type gene loadings matrix and (B) a corresponding donor scores vector indicating the level at which the corresponding loadings matrix is expressed in each donor. Additional methods are implemented to aid in selecting an appropriate number of factors and to evaluate stability of the decomposition. Additional tools are provided for downstream analysis, including integration of gene set enrichment analysis and ligand-receptor analysis. Tucker, L.R. (1966) <doi:10.1007/BF02289464>. Unkel, S., Hannachi, A., Trendafilov, N. T., & Jolliffe, I. T. (2011) <doi:10.1007/s13253-011-0055-9>. Zhou, G., & Cichocki, A. (2012) <doi:10.2478/v10175-012-0051-4>.

r-shark4r 1.0.3
Propagated dependencies: r-worrms@0.4.3 r-vroom@1.6.6 r-tidyr@1.3.1 r-terra@1.8-86 r-stringi@1.8.7 r-sp@2.2-0 r-sf@1.0-23 r-rlang@1.1.6 r-readxl@1.4.5 r-readr@2.1.6 r-purrr@1.2.0 r-lifecycle@1.0.4 r-leaflet@2.2.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-ggplot2@4.0.1 r-dt@0.34.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://sharksmhi.github.io/SHARK4R/
Licenses: Expat
Build system: r
Synopsis: Accessing and Validating Marine Environmental Data from 'SHARK' and Related Databases
Description:

This package provides functions to retrieve, process, analyze, and quality-control marine physical, chemical, and biological data. The main focus is on Swedish monitoring data available through the SHARK database <https://shark.smhi.se/en/>, with additional API support for Nordic Microalgae <https://nordicmicroalgae.org/>, Dyntaxa <https://artfakta.se/>, World Register of Marine Species ('WoRMS') <https://www.marinespecies.org>, AlgaeBase <https://www.algaebase.org>, OBIS xylookup web service <https://iobis.github.io/xylookup/> and Intergovernmental Oceanographic Commission (IOC) - UNESCO databases on harmful algae <https://www.marinespecies.org/hab/> and toxins <https://toxins.hais.ioc-unesco.org/>.

r-sim-ba 0.1.0
Propagated dependencies: r-survival@3.8-3 r-scales@1.4.0 r-rlang@1.1.6 r-pbapply@1.7-4 r-ggplot2@4.0.1 r-cobalt@4.6.2 r-chk@0.10.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sim.BA
Licenses: GPL 2+
Build system: r
Synopsis: Simulation-Based Bias Analysis for Observational Studies
Description:

Allows user to conduct a simulation based quantitative bias analysis using covariate structures generated with individual-level data to characterize the bias arising from unmeasured confounding. Users can specify their desired data generating mechanisms to simulate data and quantitatively summarize findings in an end-to-end application using this package.

r-sejmrp 1.3.4
Propagated dependencies: r-xml2@1.5.0 r-xml@3.99-0.20 r-tidyr@1.3.1 r-stringi@1.8.7 r-rvest@1.0.5 r-rpostgresql@0.7-8 r-factoextra@1.0.7 r-dplyr@1.1.4 r-dbi@1.2.3 r-cluster@2.1.8.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sejmRP
Licenses: GPL 2
Build system: r
Synopsis: An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office
Description:

Set of functions that access information about deputies and votings in Polish diet from webpage <http://www.sejm.gov.pl>. The package was developed as a result of an internship in MI2 Group - <http://mi2.mini.pw.edu.pl>, Faculty of Mathematics and Information Science, Warsaw University of Technology.

r-structenforcement 0.1.3
Propagated dependencies: r-rlang@1.1.6 r-lubridate@1.9.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=structenforcement
Licenses: Expat
Build system: r
Synopsis: Struct-Like Data Type Checking and Enforcement
Description:

Enforcement of field types in lists. A drop-in tool to allow for dynamic input data that might be questionably parsed or cast to be coerced into the specific desired format in a reasonably performant manner.

r-sfflhd 0.1.2
Propagated dependencies: r-r6@2.6.1 r-doe-base@1.2-5 r-conf-design@2.0.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/CollinErickson/sFFLHD
Licenses: GPL 3
Build system: r
Synopsis: Sequential Full Factorial-Based Latin Hypercube Design
Description:

Gives design points from a sequential full factorial-based Latin hypercube design, as described in Duan, Ankenman, Sanchez, and Sanchez (2015, Technometrics, <doi:10.1080/00401706.2015.1108233>).

r-setariaviridis 0.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/NONONOexe/setariaviridis
Licenses: Expat
Build system: r
Synopsis: Field-Collected Data of Green Foxtail
Description:

Setaria viridis (green foxtail) is a common weed. This package contains measurements from individual branches of a wild Setaria viridis plant collected near the author's home. The data is intended for use in data analysis practice.

r-stacking 0.2.1
Propagated dependencies: r-caret@7.0-1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=stacking
Licenses: Expat
Build system: r
Synopsis: Building Predictive Models with Stacking
Description:

Building predictive models with stacking which is a type of ensemble learning. Learners can be specified from those implemented in caret'. For more information of the package, see Nukui and Onogi (2023) <doi:10.1101/2023.06.06.543970>.

r-sejong 0.01
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/haven-jeon/Sejong
Licenses: GPL 3
Build system: r
Synopsis: KoNLP static dictionaries and Sejong project resources
Description:

Sejong(http://www.sejong.or.kr/) corpus and Hannanum(http://semanticweb.kaist.ac.kr/home/index.php/HanNanum) dictionaries for KoNLP.

r-structree 1.1.7
Propagated dependencies: r-penalized@0.9-53 r-mgcv@1.9-4 r-lme4@1.1-37
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=structree
Licenses: GPL 3
Build system: r
Synopsis: Tree-Structured Clustering
Description:

Tree-structured modelling of categorical predictors (Tutz and Berger (2018), <doi:10.1007/s11634-017-0298-6>) or measurement units (Berger and Tutz (2018), <doi:10.1080/10618600.2017.1371030>).

r-secr 5.4.1
Propagated dependencies: r-terra@1.8-86 r-stringr@1.6.0 r-sf@1.0-23 r-secrfunc@1.0.0 r-rcppparallel@5.1.11-1 r-rcpp@1.1.0 r-raster@3.6-32 r-nlme@3.1-168 r-mvtnorm@1.3-3 r-mgcv@1.9-4 r-mass@7.3-65 r-bh@1.87.0-1 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://www.otago.ac.nz/density/
Licenses: GPL 2+
Build system: r
Synopsis: Spatially Explicit Capture-Recapture
Description:

This package provides functions to estimate the density and size of a spatially distributed animal population sampled with an array of passive detectors, such as traps, or by searching polygons or transects. Models incorporating distance-dependent detection are fitted by maximizing the likelihood. Tools are included for data manipulation and model selection.

r-sleepcycles 1.1.4
Propagated dependencies: r-viridis@0.6.5 r-stringr@1.6.0 r-reshape2@1.4.5 r-plyr@1.8.9 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SleepCycles
Licenses: GPL 3
Build system: r
Synopsis: Sleep Cycle Detection
Description:

Sleep cycles are largely detected according to the originally proposed criteria by Feinberg & Floyd (1979) <doi:10.1111/j.1469-8986.1979.tb02991.x> as described in Blume & Cajochen (2021) <doi:10.1016/j.mex.2021.101318>.

r-sigminer 2.3.1
Propagated dependencies: r-tidyr@1.3.1 r-rlang@1.1.6 r-rcpp@1.1.0 r-purrr@1.2.0 r-nmf@0.28 r-magrittr@2.0.4 r-maftools@2.26.0 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-future@1.68.0 r-furrr@0.3.1 r-dplyr@1.1.4 r-data-table@1.17.8 r-cowplot@1.2.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ShixiangWang/sigminer
Licenses: Expat
Build system: r
Synopsis: Extract, Analyze and Visualize Mutational Signatures for Genomic Variations
Description:

Genomic alterations including single nucleotide substitution, copy number alteration, etc. are the major force for cancer initialization and development. Due to the specificity of molecular lesions caused by genomic alterations, we can generate characteristic alteration spectra, called signature (Wang, Shixiang, et al. (2021) <DOI:10.1371/journal.pgen.1009557> & Alexandrov, Ludmil B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Steele Christopher D., et al. (2022) <DOI:10.1038/s41586-022-04738-6>). This package helps users to extract, analyze and visualize signatures from genomic alteration records, thus providing new insight into cancer study.

r-strata 1.4.5
Propagated dependencies: r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-readr@2.1.6 r-purrr@1.2.0 r-lifecycle@1.0.4 r-glue@1.8.0 r-fs@1.6.6 r-dplyr@1.1.4 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/asenetcky/strata
Licenses: Expat
Build system: r
Synopsis: Simple Framework for Simple Automation
Description:

Build a project framework for users with access to only the most basic of automation tools.

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