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      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-separate 0.3.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sEparaTe
Licenses: Expat
Build system: r
Synopsis: Maximum Likelihood Estimation and Likelihood Ratio Test Functions for Separable Variance-Covariance Structures
Description:

Maximum likelihood estimation of the parameters of matrix and 3rd-order tensor normal distributions with unstructured factor variance covariance matrices, two procedures, and for unbiased modified likelihood ratio testing of simple and double separability for variance-covariance structures, two procedures. References: Dutilleul P. (1999) <doi:10.1080/00949659908811970>, Manceur AM, Dutilleul P. (2013) <doi:10.1016/j.cam.2012.09.017>, and Manceur AM, Dutilleul P. (2013) <doi:10.1016/j.spl.2012.10.020>.

r-sonar 1.0.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sonar
Licenses: GPL 3+
Build system: r
Synopsis: Fundamental Formulas for Sonar
Description:

Formulas for calculating sound velocity, water pressure, depth, density, absorption and sonar equations.

r-shelter 0.2.1
Propagated dependencies: r-yaml@2.3.10 r-sodium@1.4.0 r-rappdirs@0.3.3 r-getpass@0.2-4 r-filelock@1.0.3 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/vubiostat/shelter
Licenses: GPL 3
Build system: r
Synopsis: Support for Secure API Key Management
Description:

Secure handling of API keys can be difficult. This package provides secure convenience functions for entering / handling API keys and opening connections via inversion of control on those keys. Works seamlessly between production and developer environments.

r-sanple 0.2.0
Propagated dependencies: r-scales@1.4.0 r-salso@0.3.57 r-rcppprogress@0.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-rcolorbrewer@1.1-3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/laura-dangelo/SANple
Licenses: Expat
Build system: r
Synopsis: Fitting Shared Atoms Nested Models via Markov Chains Monte Carlo
Description:

Estimate Bayesian nested mixture models via Markov Chain Monte Carlo methods. Specifically, the package implements the common atoms model (Denti et al., 2023), and hybrid finite-infinite models. All models use Gaussian mixtures with a normal-inverse-gamma prior distribution on the parameters. Additional functions are provided to help analyzing the results of the fitting procedure. References: Denti, Camerlenghi, Guindani, Mira (2023) <doi:10.1080/01621459.2021.1933499>, Dâ Angelo, Denti (2024) <doi:10.1214/24-BA1458>.

r-scalespikeslab 1.0
Propagated dependencies: r-truncatednormal@2.3 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=ScaleSpikeSlab
Licenses: GPL 2+
Build system: r
Synopsis: Scalable Spike-and-Slab
Description:

This package provides a scalable Gibbs sampling implementation for high dimensional Bayesian regression with the continuous spike-and-slab prior. Niloy Biswas, Lester Mackey and Xiao-Li Meng, "Scalable Spike-and-Slab" (2022) <arXiv:2204.01668>.

r-saemspe 1.4
Propagated dependencies: r-smallarea@0.1 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=saeMSPE
Licenses: GPL 2+
Build system: r
Synopsis: Computing MSPE Estimates in Small Area Estimation
Description:

Compute various common mean squared predictive error (MSPE) estimators, as well as several existing variance component predictors as a byproduct, for FH model (Fay and Herriot, 1979) and NER model (Battese et al., 1988) in small area estimation.

r-staticryptr 0.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=staticryptR
Licenses: Expat
Build system: r
Synopsis: Encrypt HTML Files Using 'staticrypt'
Description:

This package provides a convenient interface to the staticrypt by Robin Moisson <https://github.com/robinmoisson/staticrypt>---'Node.js package for adding a password protection layer to static HTML pages. This package can be integrated into the post-render process of quarto documents to secure them with a password.

r-simplybee 0.4.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-rann@2.6.2 r-r6@2.6.1 r-extradistr@1.10.0 r-bh@1.87.0-1 r-alphasimr@2.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/HighlanderLab/SIMplyBee
Licenses: Expat
Build system: r
Synopsis: 'AlphaSimR' Extension for Simulating Honeybee Populations and Breeding Programmes
Description:

An extension of the AlphaSimR package (<https://cran.r-project.org/package=AlphaSimR>) for stochastic simulations of honeybee populations and breeding programmes. SIMplyBee enables simulation of individual bees that form a colony, which includes a queen, fathers (drones the queen mated with), virgin queens, workers, and drones. Multiple colony can be merged into a population of colonies, such as an apiary or a whole country of colonies. Functions enable operations on castes, colony, or colonies, to ease R scripting of whole populations. All AlphaSimR functionality with respect to genomes and genetic and phenotype values is available and further extended for honeybees, including haplo-diploidy, complementary sex determiner locus, colony events (swarming, supersedure, etc.), and colony phenotype values.

r-scifigure 0.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=scifigure
Licenses: Expat
Build system: r
Synopsis: Visualize 'Reproducibility' and 'Replicability' in a Comparison of Scientific Studies
Description:

Users may specify what fundamental qualities of a new study have or have not changed in an attempt to reproduce or replicate an original study. A comparison of the differences is visualized. Visualization approach follows Patil', Peng', and Leek (2016) <doi:10.1101/066803>.

r-simireff 1.0
Propagated dependencies: r-truncnorm@1.0-9 r-rvinecopulib@0.7.3.1.0 r-np@0.60-18 r-mass@7.3-65 r-ks@1.15.1 r-extradistr@1.10.0 r-bde@1.0.1.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/julian-urbano/simIReff/
Licenses: Expat
Build system: r
Synopsis: Stochastic Simulation for Information Retrieval Evaluation: Effectiveness Scores
Description:

This package provides tools for the stochastic simulation of effectiveness scores to mitigate data-related limitations of Information Retrieval evaluation research, as described in Urbano and Nagler (2018) <doi:10.1145/3209978.3210043>. These tools include: fitting, selection and plotting distributions to model system effectiveness, transformation towards a prespecified expected value, proxy to fitting of copula models based on these distributions, and simulation of new evaluation data from these distributions and copula models.

r-sgeostat 1.0-27
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sgeostat
Licenses: GPL 2+
Build system: r
Synopsis: An Object-Oriented Framework for Geostatistical Modeling in S+
Description:

An Object-oriented Framework for Geostatistical Modeling in S+ containing functions for variogram estimation, variogram fitting and kriging as well as some plot functions. Written entirely in S, therefore works only for small data sets in acceptable computing time.

r-spongecake 0.1.2
Dependencies: ffmpeg@8.0
Propagated dependencies: r-plyr@1.8.9 r-magrittr@2.0.4 r-jpeg@0.1-11 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ThinkRstat/spongecake
Licenses: GPL 3
Build system: r
Synopsis: Transform a Movie into a Synthetic Picture
Description:

Transform a Movie into a Synthetic Picture. A frame every 10 seconds is summarized into one colour, then every generated colors are stacked together.

r-sqlserverconnect 0.1.0
Propagated dependencies: r-pool@1.0.4 r-odbc@1.6.4.1 r-dbi@1.2.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sqlserverconnect
Licenses: Expat
Build system: r
Synopsis: Simple Helpers for Connecting to 'SQL Server'
Description:

Lightweight helpers for connecting to Microsoft SQL Server using DBI', odbc', and pool'. Provides simple wrappers for building connection arguments, establishing connections, and safely disconnecting.

r-simer 1.0.0
Propagated dependencies: r-rcppprogress@0.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-matrix@1.7-4 r-mass@7.3-65 r-jsonlite@2.0.0 r-bigmemory@4.6.4 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/xiaolei-lab/SIMER
Licenses: ASL 2.0
Build system: r
Synopsis: Data Simulation for Life Science and Breeding
Description:

Data simulator including genotype, phenotype, pedigree, selection and reproduction in R. It simulates most of reproduction process of animals or plants and provides data for GS (Genomic Selection), GWAS (Genome-Wide Association Study), and Breeding. For ADI model, please see Kao C and Zeng Z (2002) <doi:10.1093/genetics/160.3.1243>. For build.cov, please see B. D. Ripley (1987) <ISBN:9780470009604>.

r-swtools 1.1.0
Propagated dependencies: r-zoo@1.8-14 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-sf@1.0-23 r-segmented@2.1-4 r-rmarkdown@2.30 r-rlang@1.1.6 r-readr@2.1.6 r-prettymapr@0.2.5 r-magrittr@2.0.4 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-hydrotsm@0.7-0.1 r-httr@1.4.7 r-ggspatial@1.1.10 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/matt-s-gibbs/SWTools
Licenses: GPL 3
Build system: r
Synopsis: Helper Tools for Australian Hydrologists
Description:

This package provides functions to speed up work flow for hydrological analysis. Focused on Australian climate data (SILO climate data), hydrological models (eWater Source) and in particular South Australia (<https://water.data.sa.gov.au> hydrological data).

r-semicmprskcoxmsm 0.2.0
Propagated dependencies: r-twang@2.6.2 r-survival@3.8-3 r-rcpp@1.1.0 r-ggplot2@4.0.1 r-fastghquad@1.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=semicmprskcoxmsm
Licenses: GPL 2+
Build system: r
Synopsis: Use Inverse Probability Weighting to Estimate Treatment Effect for Semi Competing Risks Data
Description:

Use inverse probability weighting methods to estimate treatment effect under marginal structure model (MSM) for the transition hazard of semi competing risk data, i.e. illness death model. We implement two specific such models, the usual Markov illness death structural model and the general Markov illness death structural model. We also provide the predicted three risks functions from the marginal structure models. Zhang, Y. and Xu, R. (2022) <arXiv:2204.10426>.

r-scoreeb 0.1.1
Propagated dependencies: r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=ScoreEB
Licenses: GPL 3
Build system: r
Synopsis: Score Test Integrated with Empirical Bayes for Association Study
Description:

Perform association test within linear mixed model framework using score test integrated with Empirical Bayes for genome-wide association study. Firstly, score test was conducted for each marker under linear mixed model framework, taking into account the genetic relatedness and population structure. And then all the potentially associated markers were selected with a less stringent criterion. Finally, all the selected markers were placed into a multi-locus model to identify the true quantitative trait nucleotide.

r-sbmedian 0.1.2
Propagated dependencies: r-rdpack@2.6.4 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-expm@1.0-0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SBmedian
Licenses: Expat
Build system: r
Synopsis: Scalable Bayes with Median of Subset Posteriors
Description:

Median-of-means is a generic yet powerful framework for scalable and robust estimation. A framework for Bayesian analysis is called M-posterior, which estimates a median of subset posterior measures. For general exposition to the topic, see the paper by Minsker (2015) <doi:10.3150/14-BEJ645>.

r-smarteda 0.3.10
Propagated dependencies: r-scales@1.4.0 r-sampling@2.11 r-rmarkdown@2.30 r-qpdf@1.4.1 r-islr@1.4 r-gridextra@2.3 r-ggplot2@4.0.1 r-ggally@2.4.0 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://daya6489.github.io/SmartEDA/
Licenses: Expat
Build system: r
Synopsis: Summarize and Explore the Data
Description:

Exploratory analysis on any input data describing the structure and the relationships present in the data. The package automatically select the variable and does related descriptive statistics. Analyzing information value, weight of evidence, custom tables, summary statistics, graphical techniques will be performed for both numeric and categorical predictors.

r-smfsb 1.5
Propagated dependencies: r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=smfsb
Licenses: LGPL 3
Build system: r
Synopsis: Stochastic Modelling for Systems Biology
Description:

Code and data for modelling and simulation of stochastic kinetic biochemical network models. It contains the code and data associated with the second and third editions of the book Stochastic Modelling for Systems Biology, published by Chapman & Hall/CRC Press.

r-senser 0.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=senseR
Licenses: Expat
Build system: r
Synopsis: Proxy Indicator Diagnostic Tool for Analytical and Policy Use
Description:

This package provides statistical diagnostics to evaluate whether proxy indicators reliably represent an unobservable target construct. The main function senser() assesses proxies across multiple dimensions including monotonicity, information content, stability, distributional alignment, and potential bias risk. It prints a concise, interpretable summary suitable for analytical and policy-oriented assessment, without claiming causal inference.

r-segen 2.0.0
Propagated dependencies: r-tictoc@1.2.1 r-scales@1.4.0 r-rfast@2.1.5.2 r-readr@2.1.6 r-purrr@1.2.0 r-philentropy@0.10.0 r-narray@0.5.2 r-moments@0.14.1 r-modeest@2.4.0 r-lubridate@1.9.4 r-imputets@3.4 r-greybox@2.0.8 r-ggplot2@4.0.1 r-future@1.68.0 r-furrr@0.3.1 r-fastdummies@1.7.5 r-fancova@0.6-1 r-entropy@1.3.2 r-dtw@1.23-1 r-digest@0.6.39
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://rpubs.com/giancarlo_vercellino/segen
Licenses: GPL 3
Build system: r
Synopsis: Sequence Generalization Through Similarity Network
Description:

Proposes an application for sequence prediction generalizing the similarity within the network of previous sequences.

r-survsens 1.1.0
Propagated dependencies: r-survival@3.8-3 r-reshape2@1.4.5 r-metr@0.18.3 r-interp@1.1-6 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/Rong0707/survSens
Licenses: GPL 2
Build system: r
Synopsis: Sensitivity Analysis with Time-to-Event Outcomes
Description:

This package performs a dual-parameter sensitivity analysis of treatment effect to unmeasured confounding in observational studies with either survival or competing risks outcomes. Huang, R., Xu, R. and Dulai, P.S.(2020) <doi:10.1002/sim.8672>.

r-sparta 1.0.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/mlindsk/sparta
Licenses: Expat
Build system: r
Synopsis: Sparse Tables
Description:

Fast Multiplication and Marginalization of Sparse Tables <doi:10.18637/jss.v111.i02>.

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