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If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.
This package provides a set of functions to select the optimal block-length for a dependent bootstrap (block-bootstrap). Includes the Hall, Horowitz, and Jing (1995) <doi:10.1093/biomet/82.3.561> subsampling-based cross-validation method, the Politis and White (2004) <doi:10.1081/ETC-120028836> Spectral Density Plug-in method, including the Patton, Politis, and White (2009) <doi:10.1080/07474930802459016> correction, and the Lahiri, Furukawa, and Lee (2007) <doi:10.1016/j.stamet.2006.08.002> nonparametric plug-in method, with a corresponding set of S3 plot methods.
This package provides an integrated data management solution for assets installed via the Biobricks.ai platform. Streamlines the process of loading and interacting with diverse datasets in a consistent manner. A list of bricks is available at <https://status.biobricks.ai>. Documentation for Biobricks.ai is available at <https://docs.biobricks.ai>.
This package provides a computational toolbox designed for handling missing values in large datasets with the Multiple Imputation by Chained Equations (MICE) by using Apache Spark'. The methodology is described in Morvan et al. (2026) <doi:10.48550/arXiv.2601.21613>.
Model agnostic tool for decomposition of predictions from black boxes. Break Down Table shows contributions of every variable to a final prediction. Break Down Plot presents variable contributions in a concise graphical way. This package work for binary classifiers and general regression models.
Various supervised and unsupervised binning tools including using entropy, recursive partition methods and clustering.
Bayesian estimations of a covariance matrix for multivariate normal data. Assumes that the covariance matrix is sparse or band matrix and positive-definite. Methods implemented include the beta-mixture shrinkage prior (Lee et al. (2022) <doi:10.1016/j.jmva.2022.105067>), screened beta-mixture prior (Lee et al. (2024) <doi:10.1214/24-BA1495>), and post-processed posteriors for banded and sparse covariances (Lee et al. (2023) <doi:10.1214/22-BA1333>; Lee and Lee (2023) <doi:10.1016/j.jeconom.2023.105475>). This software has been developed using funding supported by Basic Science Research Program through the National Research Foundation of Korea ('NRF') funded by the Ministry of Education ('RS-2023-00211979', NRF-2022R1A5A7033499', NRF-2020R1A4A1018207 and NRF-2020R1C1C1A01013338').
Bindings to the blowfish password hashing algorithm <https://www.openbsd.org/papers/bcrypt-paper.pdf> derived from the OpenBSD implementation.
BayesX performs Bayesian inference in structured additive regression (STAR) models. The R package BayesXsrc provides the BayesX command line tool for easy installation. A convenient R interface is provided in package R2BayesX.
Bayesian models for accurately estimating conditional distributions by race, using Bayesian Improved Surname Geocoding (BISG) probability estimates of individual race. Implements the methods described in McCartan, Fisher, Goldin, Ho and Imai (2025) <doi:10.1080/01621459.2025.2526695>.
This package provides a framework for building interactive dashboards and document-based reports. Underlying data manipulation and visualization is possible using a web-based point and click user interface.
This package provides nested sequential Monte Carlo algorithms for performing sequential inference in the Bayesian Mallows model, which is a widely used probability model for rank and preference data. The package implements the SMC2 (Sequential Monte Carlo Squared) algorithm for handling sequentially arriving rankings and pairwise preferences, including support for complete rankings, partial rankings, and pairwise comparisons. The methods are based on Sorensen (2025) <doi:10.1214/25-BA1564>.
This package provides functions for data augmentation using the Bayesian discount prior method for single arm and two-arm clinical trials, as described in Haddad et al. (2017) <doi:10.1080/10543406.2017.1300907>. The discount power prior methodology was developed in collaboration with the The Medical Device Innovation Consortium (MDIC) Computer Modeling & Simulation Working Group.
This package provides a collection of S4 classes, methods and functions to create and visualize business plans. Different types of cash flows can be defined, which can then be used and tabulated to create profit and loss statements, cash flow plans, investment and depreciation schedules, loan amortization schedules, etc. The methods are designed to produce handsome tables in both PDF and HTML using RMarkdown or Shiny'.
It is designed to calculate connection between (among) brain regions and plot connection lines. Also, the summary function is included to summarize group-level connectivity network. Kang, Jian (2016) <doi:10.1016/j.neuroimage.2016.06.042>.
This package provides functions to estimate latent dimensions of choice and judgment using Aldrich-McKelvey and Blackbox scaling methods, as described in Poole et al. (2016, <doi:10.18637/jss.v069.i07>). These techniques allow researchers (particularly those analyzing political attitudes, public opinion, and legislative behavior) to recover spatial estimates of political actors ideal points and stimuli from issue scale data, accounting for perceptual bias, multidimensional spaces, and missing data. The package uses singular value decomposition and alternating least squares (ALS) procedures to scale self-placement and perceptual data into a common latent space for the analysis of ideological or evaluative dimensions. Functionality also include tools for assessing model fit, handling complex survey data structures, and reproducing simulated datasets for methodological validation.
This package contains functions for bias-Corrected Forecasting and Bootstrap Prediction Intervals for Autoregressive Time Series.
Bayesian Additive Regression Trees (BART) provide flexible nonparametric modeling of covariates for continuous, binary, categorical and time-to-event outcomes. For more information see Sparapani, Spanbauer and McCulloch <doi:10.18637/jss.v097.i01>.
This package provides several methods for generating density functions based on binned data. Methods include step function, recursive subdivision, and optimized spline. Data are assumed to be nonnegative, the top bin is assumed to have no upper bound, but the bin widths need be equal. All PDF smoothing methods maintain the areas specified by the binned data. (Equivalently, all CDF smoothing methods interpolate the points specified by the binned data.) In practice, an estimate for the mean of the distribution should be supplied as an optional argument. Doing so greatly improves the reliability of statistics computed from the smoothed density functions. Includes methods for estimating the Gini coefficient, the Theil index, percentiles, and random deviates from a smoothed distribution. Among the three methods, the optimized spline (splinebins) is recommended for most purposes. The percentile and random-draw methods should be regarded as experimental, and these methods only support splinebins.
Call the data wrappers for Bursa Metropolitan Municipality's Open Data Portal <https://acikyesil.bursa.bel.tr/>. This will return all datasets stored in different formats.
This package provides tools for constructing board/grid based games, as well as readily available game(s) for your entertainment.
Simulate, estimate and forecast a wide range of regression based dynamic models for bounded time series, covering the most commonly applied models in the literature. The main calculations are done in FORTRAN, which translates into very fast algorithms.
Bayesian power/type I error calculation and model fitting using the power prior and the normalized power prior for proportional hazards models with piecewise constant hazard. The methodology and examples of applying the package are detailed in <doi:10.48550/arXiv.2404.05118>. The Bayesian clinical trial design methodology is described in Chen et al. (2011) <doi:10.1111/j.1541-0420.2011.01561.x>, and Psioda and Ibrahim (2019) <doi:10.1093/biostatistics/kxy009>. The proportional hazards model with piecewise constant hazard is detailed in Ibrahim et al. (2001) <doi:10.1007/978-1-4757-3447-8>.
Carries out Bland Altman analyses (also known as a Tukey mean-difference plot) as described by JM Bland and DG Altman in 1986 <doi:10.1016/S0140-6736(86)90837-8>. This package was created in 2015 as existing Bland-Altman analysis functions did not calculate confidence intervals. This package was created to rectify this, and create reproducible plots. This package is also available as a module for the jamovi statistical spreadsheet (see <https://www.jamovi.org> for more information).
Collect data from and make posts on Bluesky Social via the Hypertext Transfer Protocol (HTTP) Application Programming Interface (API), as documented at <https://atproto.com/specs/xrpc>. This further supports broader queries to the Authenticated Transfer (AT) Protocol <https://atproto.com/> which Bluesky Social relies on. Data is returned in a tidy format and posts can be made using a simple interface.