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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-scpropreg 1.0
Propagated dependencies: r-rfast2@0.1.5.6 r-rfast@2.1.5.2 r-quadprog@1.5-8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=scpropreg
Licenses: GPL 2+
Build system: r
Synopsis: Simplicially Constrained Regression Models for Proportions
Description:

Simplicially constrained regression models for proportions in both sides. The constraint is always that the betas are non-negative and sum to 1. References: Iverson S.J.., Field C., Bowen W.D. and Blanchard W. (2004) "Quantitative Fatty Acid Signature Analysis: A New Method of Estimating Predator Diets". Ecological Monographs, 74(2): 211-235. <doi:10.1890/02-4105>.

r-secrdesign 2.10.1
Propagated dependencies: r-sf@1.0-23 r-secr@5.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-kofnga@1.3 r-bh@1.87.0-1 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://www.otago.ac.nz/density/
Licenses: GPL 2+
Build system: r
Synopsis: Sampling Design for Spatially Explicit Capture-Recapture
Description:

This package provides tools for designing spatially explicit capture-recapture studies of animal populations. This is primarily a simulation manager for package secr'. Extensions in version 2.5.0 include costing and evaluation of detector spacing.

r-sfhelper 0.2.2.0
Propagated dependencies: r-stringr@1.6.0 r-sf@1.0-23 r-rjson@0.2.23 r-rcurl@1.98-1.17 r-mapview@2.11.4 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sfhelper
Licenses: Expat
Build system: r
Synopsis: Repair Functions for 'sf' Package Objects
Description:

This package provides a group of functions that support the sf package, focused primarily on repairing polygons that break when re-projected.

r-spef 1.0.9
Propagated dependencies: r-survival@3.8-3 r-squarem@2021.1 r-sm@2.2-6.0 r-plyr@1.8.9 r-nleqslv@3.3.5 r-ggplot2@4.0.1 r-bb@2019.10-1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: http://github.com/stc04003/spef
Licenses: GPL 3+
Build system: r
Synopsis: Semiparametric Estimating Functions
Description:

This package provides functions for fitting semiparametric regression models for panel count survival data. An overview of the package can be found in Wang and Yan (2011) <doi:10.1016/j.cmpb.2010.10.005> and Chiou et al. (2018) <doi:10.1111/insr.12271>.

r-sqn 1.0.6
Propagated dependencies: r-nor1mix@1.3-3 r-mclust@6.1.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SQN
Licenses: LGPL 2.0+
Build system: r
Synopsis: Subset Quantile Normalization
Description:

Normalization based a subset of negative control probes as described in Subset quantile normalization using negative control features'. Wu Z, Aryee MJ, J Comput Biol. 2010 Oct;17(10):1385-95 [PMID 20976876].

r-semnetdictionaries 0.2.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/AlexChristensen/SemNetDictionaries
Licenses: GPL 3+
Build system: r
Synopsis: Dictionaries for the 'SemNetCleaner' Package
Description:

This package implements dictionaries that can be used in the SemNetCleaner package. Also includes several functions aimed at facilitating the text cleaning analysis in the SemNetCleaner package. This package is designed to integrate and update word lists and dictionaries based on each user's individual needs by allowing users to store and save their own dictionaries. Dictionaries can be added to the SemNetDictionaries package by submitting user-defined dictionaries to <https://github.com/AlexChristensen/SemNetDictionaries>.

r-soilchemistry 0.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=soilchemistry
Licenses: GPL 3+
Build system: r
Synopsis: Computation of Properties Related to Soil Chemical Environment and Nutrient Availability
Description:

Facilitates basic and equation-based analyses of some important soil properties related to soil chemical environment and nutrient availability to plants. Freundlich H (1907). <doi:10.1515/zpch-1907-5723>. Datta SP, Bhadoria PBS (1999). <doi:10.1002%2F%28SICI%291522-2624%28199903%29162%3A2%3C183%3A%3AAID-JPLN183%3E3.0.CO%3B2-A>."Boron adsorption and desorption in some acid soils of West Bengal, India". Langmuir I (1918). <doi:10.1021/ja02242a004> "The adsorption of gases on plane surfaces of glass, mica, and platinum". Khasawneh FE (1971). <doi:10.2136/sssaj1971.03615995003500030029x> "Solution ion activity and plant growth".

r-soiltexture 1.5.3
Propagated dependencies: r-sp@2.2-0 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/julienmoeys/soiltexture
Licenses: AGPL 3+
Build system: r
Synopsis: Functions for Soil Texture Plot, Classification and Transformation
Description:

"The Soil Texture Wizard" is a set of R functions designed to produce texture triangles (also called texture plots, texture diagrams, texture ternary plots), classify and transform soil textures data. These functions virtually allows to plot any soil texture triangle (classification) into any triangle geometry (isosceles, right-angled triangles, etc.). This set of function is expected to be useful to people using soil textures data from different soil texture classification or different particle size systems. Many (> 15) texture triangles from all around the world are predefined in the package. A simple text based graphical user interface is provided: soiltexture_gui().

r-sims 0.0.4
Propagated dependencies: r-yesno@0.1.3 r-nlist@0.4.0 r-future-apply@1.20.0 r-chk@0.10.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/poissonconsulting/sims
Licenses: Expat
Build system: r
Synopsis: Simulate Data from R or 'JAGS' Code
Description:

Generates data from R or JAGS code for use in simulation studies. The data are returned as an nlist::nlists object and/or saved to file as individual .rds files. Parallelization is implemented using the future package. Progress is reported using the progressr package.

r-savonliquide 0.2.0
Propagated dependencies: r-httr@1.4.7 r-htmltools@0.5.8.1 r-glue@1.8.0 r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/feddelegrand7/savonliquide
Licenses: Expat
Build system: r
Synopsis: Accessibility Toolbox for 'R' Users
Description:

This package provides a toolbox that allows the user to implement accessibility related concepts.

r-sanfranbeachwater 0.1.0
Propagated dependencies: r-xml2@1.5.0 r-tibble@3.3.0 r-rvest@1.0.5 r-readr@2.1.6 r-magrittr@2.0.4 r-lubridate@1.9.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SanFranBeachWater
Licenses: Expat
Build system: r
Synopsis: Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data
Description:

Downloads and tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program data. Data sets can be downloaded per beach, or the raw data can be downloaded. See <https://sfwater.org/cfapps/lims/beachmain1.cfm>.

r-simvitd 1.0.3
Propagated dependencies: r-simpleboot@1.1-8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SimVitD
Licenses: GPL 2+
Build system: r
Synopsis: Simulation Tools for Planning Vitamin D Studies
Description:

Simulation tools for planning Vitamin D studies. Individual vitamin D status profiles are simulated, modelling population heterogeneity in trial arms. Exposures to infectious agents are generated, with infection depending on vitamin D status.

r-snn 1.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=snn
Licenses: GPL 3
Build system: r
Synopsis: Stabilized Nearest Neighbor Classifier
Description:

Implement K-nearest neighbor classifier, weighted nearest neighbor classifier, bagged nearest neighbor classifier, optimal weighted nearest neighbor classifier and stabilized nearest neighbor classifier, and perform model selection via 5 fold cross-validation for them. This package also provides functions for computing the classification error and classification instability of a classification procedure.

r-samadb 0.3.1
Propagated dependencies: r-writexl@1.5.4 r-rmysql@0.11.1 r-dbi@1.2.3 r-data-table@1.17.8 r-collapse@2.1.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=samadb
Licenses: GPL 3
Build system: r
Synopsis: South Africa Macroeconomic Database API
Description:

An R API providing access to a relational database with macroeconomic time series data for South Africa, obtained from the South African Reserve Bank (SARB) and Statistics South Africa (STATSSA), and updated on a weekly basis via the EconData <https://www.econdata.co.za/> platform and automated scraping of the SARB and STATSSA websites. The database is maintained at the Department of Economics at Stellenbosch University.

r-scpoem 0.1.3
Propagated dependencies: r-xgboost@1.7.11.1 r-vgam@1.1-13 r-tictoc@1.2.1 r-stringr@1.6.0 r-sctenifoldnet@1.3 r-reticulate@1.44.1 r-monocle@2.38.0 r-matrix@1.7-4 r-magrittr@2.0.4 r-glmnet@4.1-10 r-foreach@1.5.2 r-doparallel@1.0.17 r-cicero@1.28.0 r-biocgenerics@0.56.0 r-biobase@2.70.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/Houyt23/scPOEM
Licenses: GPL 2+
Build system: r
Synopsis: Single-Cell Meta-Path Based Omic Embedding
Description:

Provide a workflow to jointly embed chromatin accessibility peaks and expressed genes into a shared low-dimensional space using paired single-cell ATAC-seq (scATAC-seq) and single-cell RNA-seq (scRNA-seq) data. It integrates regulatory relationships among peak-peak interactions (via Cicero'), peak-gene interactions (via Lasso, random forest, and XGBoost), and gene-gene interactions (via principal component regression). With the input of paired scATAC-seq and scRNA-seq data matrices, it assigns a low-dimensional feature vector to each gene and peak. Additionally, it supports the reconstruction of gene-gene network with low-dimensional projections (via epsilon-NN) and then the comparison of the networks of two conditions through manifold alignment implemented in scTenifoldNet'. See <doi:10.1093/bioinformatics/btaf483> for more details.

r-shinyquerybuilder 0.1.0
Propagated dependencies: r-shiny@1.11.1 r-rlang@1.1.6 r-r6@2.6.1 r-querybuilder@0.1.0 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-htmltools@0.5.8.1 r-glue@1.8.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=shinyQueryBuilder
Licenses: Expat
Build system: r
Synopsis: Construct Complex Filtering Queries in 'Shiny'
Description:

Input widget that allows to construct complex filtering queries in Shiny'. It's a wrapper for JavaScript library jQuery-QueryBuilder', check <https://querybuilder.js.org/>.

r-spongecake 0.1.2
Dependencies: ffmpeg@8.0
Propagated dependencies: r-plyr@1.8.9 r-magrittr@2.0.4 r-jpeg@0.1-11 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ThinkRstat/spongecake
Licenses: GPL 3
Build system: r
Synopsis: Transform a Movie into a Synthetic Picture
Description:

Transform a Movie into a Synthetic Picture. A frame every 10 seconds is summarized into one colour, then every generated colors are stacked together.

r-scopro 0.1.0
Propagated dependencies: r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SCOPRO
Licenses: GPL 3
Build system: r
Synopsis: Score Projection Between in 'Vivo' and in 'Vitro' Datasets
Description:

Assigns a score projection from 0 to 1 between a given in vivo stage and each single cluster from an in vitro dataset. The score is assigned based on the the fraction of specific markers of the in vivo stage that are conserved in the in vitro clusters <https://github.com/ScialdoneLab>.

r-scriptloc 1.0.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=scriptloc
Licenses: Expat
Build system: r
Synopsis: Get the Location of the R Script that is Being Sourced/Executed
Description:

This package provides functions to retrieve the location of R scripts loaded through the source() function or run from the command line using the Rscript command. This functionality is analogous to the Bash shell's $BASH_SOURCE[0]. Users can first set the project root's path relative to the script path and then all subsequent paths relative to the root. This system ensures that all paths lead to the same location regardless of where any script is executed/loaded from without resorting to the use of setwd() at the top of the scripts.

r-sensitivity 1.31.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sensitivity
Licenses: GPL 2
Build system: r
Synopsis: Global Sensitivity Analysis of Model Outputs and Importance Measures
Description:

This package provides a collection of functions for sensitivity analysis of model outputs (factor screening, global sensitivity analysis and robustness analysis), for variable importance measures of data, as well as for interpretability of machine learning models. Most of the functions have to be applied on scalar output, but several functions support multi-dimensional outputs.

r-spatialbss 0.16-0
Propagated dependencies: r-spatialnp@1.1-6 r-sp@2.2-0 r-robustbase@0.99-6 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-jade@2.0-4 r-distances@0.1.13
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SpatialBSS
Licenses: GPL 2+
Build system: r
Synopsis: Blind Source Separation for Multivariate Spatial Data
Description:

Blind source separation for multivariate spatial data based on simultaneous/joint diagonalization of (robust) local covariance matrices. This package is an implementation of the methods described in Bachoc, Genton, Nordhausen, Ruiz-Gazen and Virta (2020) <doi:10.1093/biomet/asz079>.

r-sftrack 0.5.4
Propagated dependencies: r-sf@1.0-23
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://mablab.org/sftrack/
Licenses: Expat
Build system: r
Synopsis: Modern Classes for Tracking and Movement Data
Description:

Modern classes for tracking and movement data, building on sf spatial infrastructure, and early theoretical work from Turchin (1998, ISBN: 9780878938476), and Calenge et al. (2009) <doi:10.1016/j.ecoinf.2008.10.002>. Tracking data are series of locations with at least 2-dimensional spatial coordinates (x,y), a time index (t), and individual identification (id) of the object being monitored; movement data are made of trajectories, i.e. the line representation of the path, composed by steps (the straight-line segments connecting successive locations). sftrack is designed to handle movement of both living organisms and inanimate objects.

r-shannon 0.2.0
Propagated dependencies: r-vares@1.0.2 r-extradistr@1.10.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=shannon
Licenses: GPL 2
Build system: r
Synopsis: Computation of Entropy Measures and Relative Loss
Description:

The functions allow for the numerical evaluation of some commonly used entropy measures, such as Shannon entropy, Rényi entropy, Havrda and Charvat entropy, and Arimoto entropy, at selected parametric values from several well-known and widely used probability distributions. Moreover, the functions also compute the relative loss of these entropies using the truncated distributions. Related works include: Awad, A. M., & Alawneh, A. J. (1987). Application of entropy to a life-time model. IMA Journal of Mathematical Control and Information, 4(2), 143-148. <doi:10.1093/imamci/4.2.143>.

r-sampledatasets 0.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/lightbluetitan/sampledatasets
Licenses: GPL 3
Build system: r
Synopsis: Collection of Sample Datasets
Description:

This package provides a collection of sample datasets on various fields such as automotive performance and safety data to historical demographics and socioeconomic indicators, as well as recreational data. It serves as a resource for researchers and analysts seeking to perform analyses and derive insights from classic data sets in R.

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