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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-twc 0.0.2
Dependencies: proj@9.3.1 gdal@3.8.2
Propagated dependencies: r-sp@2.2-0 r-sf@1.0-23 r-raster@3.6-32 r-ncdf4@1.24 r-magrittr@2.0.4 r-lubridate@1.9.4 r-foreach@1.5.2 r-doparallel@1.0.17 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/imarkonis/twc
Licenses: GPL 3
Build system: r
Synopsis: Terrestrial Water Cycle
Description:

An open-access tool/framework that constitutes the core functions to analyze terrestrial water cycle data across various spatio-temporal scales.

r-tivy 0.1.1
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.6.0 r-stringi@1.8.7 r-scales@1.4.0 r-rvest@1.0.5 r-rlang@1.1.6 r-rcolorbrewer@1.1-3 r-pdftools@3.6.0 r-patchwork@1.3.2 r-lubridate@1.9.4 r-leaflet@2.2.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-ggplot2@4.0.1 r-future-apply@1.20.0 r-future@1.68.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/HansTtito/Tivy
Licenses: Expat
Build system: r
Synopsis: Toolkit for Investigation and Visualization of Young Anchovies
Description:

Specialized toolkit for processing biological and fisheries data from Peru's anchovy (Engraulis ringens) fishery. Provides functions to analyze fishing logbooks, calculate biological indicators (length-weight relationships, juvenile percentages), generate spatial fishing indicators, and visualize regulatory measures from Peru's Ministry of Production. Features automated data processing from multiple file formats, coordinate validation, spatial analysis of fishing zones, and tools for analyzing fishing closure announcements and regulatory compliance. Includes built-in datasets of Peruvian coastal coordinates and parallel lines for analyzing fishing activities within regulatory zones.

r-testcomparer 1.1.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://kajlinko.github.io/testCompareR/
Licenses: GPL 3
Build system: r
Synopsis: Comparing Two Diagnostic Tests with Dichotomous Results using Paired Data
Description:

This package provides a method for comparing the results of two binary diagnostic tests using paired data. Users can rapidly perform descriptive and inferential statistics in a single function call. Options permit users to select which parameters they are interested in comparing and methods for correction for multiple comparisons. Confidence intervals are calculated using the methods with the best coverage. Hypothesis tests use the methods with the best asymptotic performance. A summary of the methods is available in Roldán-Nofuentes (2020) <doi:10.1186/s12874-020-00988-y>. This package is targeted at clinical researchers who want to rapidly and effectively compare results from binary diagnostic tests.

r-timechecker 1.1.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=timechecker
Licenses: GPL 3
Build system: r
Synopsis: Visualization of Processing Time with Standard Output
Description:

Displays processing time in a clear and structured way. One function supports iterative workflows by predicting and showing the total time required, while another reports the time taken for individual steps within a process.

r-thermalsampler 0.1.2
Propagated dependencies: r-tidyr@1.3.1 r-testthat@3.3.0 r-sn@2.1.1 r-rlang@1.1.6 r-purrr@1.2.0 r-mass@7.3-65 r-magrittr@2.0.4 r-janitor@2.2.1 r-ggplot2@4.0.1 r-envstats@3.1.0 r-dplyr@1.1.4 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=ThermalSampleR
Licenses: GPL 3
Build system: r
Synopsis: Calculate Sample Sizes Required for Critical Thermal Limits Experiments
Description:

We present a range of simulations to aid researchers in determining appropriate sample sizes when performing critical thermal limits studies (e.g. CTmin/CTmin experiments). A number of wrapper functions are provided for plotting and summarising outputs from these simulations. This package is presented in van Steenderen, C.J.M., Sutton, G.F., Owen, C.A., Martin, G.D., and Coetzee, J.A. Sample size assessments for thermal physiology studies: An R package and R Shiny application. 2023. Physiological Entomology. <doi:10.1111/phen.12416>. The GUI version of this package is available on the R Shiny online server at: <https://clarkevansteenderen.shinyapps.io/ThermalSampleR_Shiny/> , or it is accessible via GitHub at <https://github.com/clarkevansteenderen/ThermalSampleR_Shiny/>. We would like to thank Grant Duffy (University of Otago, Dundedin, New Zealand) for granting us permission to use the source code for the Test of Total Equivalency function.

r-tcgaviz 1.0.2
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-stringr@1.6.0 r-shinyjs@2.1.0 r-shinyfeedback@0.4.0 r-shiny@1.11.1 r-scales@1.4.0 r-rstatix@0.7.3 r-rlang@1.1.6 r-reshape2@1.4.5 r-readr@2.1.6 r-plotly@4.11.0 r-magrittr@2.0.4 r-golem@0.5.1 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-dt@0.34.0 r-dplyr@1.1.4 r-data-table@1.17.8 r-config@0.3.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tcgaViz
Licenses: GPL 3
Build system: r
Synopsis: Visualization Tool for the Cancer Genome Atlas Program (TCGA)
Description:

Differential analysis of tumor tissue immune cell type abundance based on RNA-seq gene-level expression from The Cancer Genome Atlas (TCGA; <https://pancanatlas.xenahubs.net>) database.

r-tidyfit 0.7.4
Propagated dependencies: r-yardstick@1.3.2 r-vctrs@0.6.5 r-tidyr@1.3.1 r-tibble@3.3.0 r-rsample@1.3.1 r-rlang@1.1.6 r-purrr@1.2.0 r-progressr@0.18.0 r-mass@7.3-65 r-generics@0.1.4 r-furrr@0.3.1 r-dplyr@1.1.4 r-dials@1.4.2 r-crayon@1.5.3 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://tidyfit.residualmetrics.com
Licenses: GPL 3
Build system: r
Synopsis: Regularized Linear Modeling with Tidy Data
Description:

An extension to the R tidy data environment for automated machine learning. The package allows fitting and cross validation of linear regression and classification algorithms on grouped data.

r-tau 0.0-27
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tau
Licenses: GPL 2
Build system: r
Synopsis: Text Analysis Utilities
Description:

Utilities for text analysis.

r-types 1.0.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=types
Licenses: Expat
Build system: r
Synopsis: Type Annotations
Description:

This package provides a simple type annotation for R that is usable in scripts, in the R console and in packages. It is intended as a convention to allow other packages to use the type information to provide error checking, automatic documentation or optimizations.

r-treatmentselection 2.1.1
Propagated dependencies: r-survival@3.8-3 r-ggplot2@4.0.1 r-binom@1.1-1.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: http://rpubs.com/mdbrown/TreatmentSelection
Licenses: GPL 3
Build system: r
Synopsis: Evaluate Treatment Selection Biomarkers
Description:

This package provides a suite of descriptive and inferential methods designed to evaluate one or more biomarkers for their ability to guide patient treatment recommendations. Package includes functions to assess the calibration of risk models; and plot, evaluate, and compare markers. Please see the reference Janes H, Brown MD, Huang Y, et al. (2014) <doi:10.1515/ijb-2012-0052> for further details.

r-tailplots 0.1.1
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tailplots
Licenses: Expat
Build system: r
Synopsis: Estimators and Plots for Gamma and Pareto Tail Detection
Description:

Estimators for two functionals used to detect Gamma, Pareto or Lognormal distributions, as well as distributions exhibiting similar tail behavior, as introduced by Iwashita and Klar (2023) <doi:10.1111/stan.12316> and Klar (2024) <doi:10.1080/00031305.2024.2413081>. One of these functionals, g, originally proposed by Asmussen and Lehtomaa (2017) <doi:10.3390/risks5010010>, distinguishes between log-convex and log-concave tail behavior. Furthermore the characterization of the lognormal distribution is based on the work of Mosimann (1970) <doi:10.2307/2284599>. The package also includes methods for visualizing these estimators and their associated confidence intervals across various threshold values.

r-tttensor 1.0.2
Propagated dependencies: r-rtensor@1.4.9 r-ptak@2.0.0 r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/rikenbit/ttTensor
Licenses: Expat
Build system: r
Synopsis: Tensor-Train Decomposition
Description:

Tensor-train is a compact representation for higher-order tensors. Some algorithms for performing tensor-train decomposition are available such as TT-SVD, TT-WOPT, and TT-Cross. For the details of the algorithms, see I. V. Oseledets (2011) <doi:10.1137/090752286>, Yuan Longao, et al (2017) <doi:10.48550/arXiv.1709.02641>, I. V. Oseledets (2010) <doi:10.1016/j.laa.2009.07.024>.

r-toothnroll 1.11
Propagated dependencies: r-vegan@2.7-2 r-stringr@1.6.0 r-rvcg@0.25 r-rgl@1.3.31 r-oce@1.8-3 r-morphomap@1.5 r-morpho@2.13 r-mgcv@1.9-4 r-lattice@0.22-7 r-geometry@0.5.2 r-desctools@0.99.60 r-compositions@2.0-9 r-colorramps@2.3.4 r-arothron@2.0.5 r-alphashape3d@1.3.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=Toothnroll
Licenses: GPL 2
Build system: r
Synopsis: Dental Tissues Landmarking Measuring and Mapping
Description:

Two- and three-dimensional morphometric maps of enamel and dentine thickness and multivariate analysis. Volume calculation of dental materials. Principal component analysis of thickness maps with associated morphometric map variations.

r-tsmarch 1.0.0
Propagated dependencies: r-zoo@1.8-14 r-xts@0.14.1 r-tsmethods@1.0.3 r-tsgarch@1.0.3 r-tsdistributions@1.0.3 r-shape@1.4.6.1 r-sandwich@3.1-1 r-rsolnp@2.0.1 r-rdpack@2.6.4 r-rcppparallel@5.1.11-1 r-rcppbessel@1.0.0 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-numderiv@2016.8-1.1 r-nloptr@2.2.1 r-lubridate@1.9.4 r-future-apply@1.20.0 r-future@1.68.0 r-data-table@1.17.8 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/tsmodels/tsmarch
Licenses: GPL 2
Build system: r
Synopsis: Multivariate ARCH Models
Description:

Feasible Multivariate Generalized Autoregressive Conditional Heteroscedasticity (GARCH) models including Dynamic Conditional Correlation (DCC), Copula GARCH and Generalized Orthogonal GARCH with Generalized Hyperbolic distribution. A review of some of these models can be found in Boudt, Galanos, Payseur and Zivot (2019) <doi:10.1016/bs.host.2019.01.001>.

r-thresholdrocsurvival 1.2.1
Propagated dependencies: r-thresholdroc@2.9.5 r-survival@3.8-3 r-psych@2.5.6 r-proc@1.19.0.1 r-informativecensoring@0.3.6 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=ThresholdROCsurvival
Licenses: GPL 2+
Build system: r
Synopsis: Diagnostic Ability Assessment with Right-Censored Data at a Fixed Time t
Description:

We focus on the diagnostic ability assessment of medical tests when the outcome of interest is the status (alive or dead) of the subjects at a certain time-point t. This binary status is determined by right-censored times to event and it is unknown for those subjects censored before t. Here we provide three methods (unknown status exclusion, imputation of censored times and using time-dependent ROC curves) to evaluate the diagnostic ability of binary and continuous tests in this context. Two references for the methods used here are Skaltsa et al. (2010) <doi:10.1002/bimj.200900294> and Heagerty et al. (2000) <doi:10.1111/j.0006-341x.2000.00337.x>.

r-tukeyc 1.3-44
Propagated dependencies: r-xtable@1.8-4 r-emmeans@2.0.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/jcfaria/TukeyC
Licenses: GPL 2+
Build system: r
Synopsis: Conventional Tukey Test
Description:

This package provides tools to perform multiple comparison analyses, based on the well-known Tukey's "Honestly Significant Difference" (HSD) test. In models involving interactions, TukeyC stands out from other R packages by implementing intuitive and easy-to-use functions. In addition to accommodating traditional R methods such as lm() and aov(), it has also been extended to objects of the lmer() class, that is, mixed models with fixed effects. For more details see Tukey (1949) <doi:10.2307/3001913>.

r-tdcm 0.1.0
Dependencies: pandoc@2.19.2
Propagated dependencies: r-stringr@1.6.0 r-polycor@0.8-1 r-gtools@3.9.5 r-cdm@8.3-14
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/cotterell/tdcm
Licenses: Expat
Build system: r
Synopsis: The Transition Diagnostic Classification Model Framework
Description:

Estimate the transition diagnostic classification model (TDCM) described in Madison & Bradshaw (2018) <doi:10.1007/s11336-018-9638-5>, a longitudinal extension of the log-linear cognitive diagnosis model (LCDM) in Henson, Templin & Willse (2009) <doi:10.1007/s11336-008-9089-5>. As the LCDM subsumes many other diagnostic classification models (DCMs), many other DCMs can be estimated longitudinally via the TDCM. The TDCM package includes functions to estimate the single-group and multigroup TDCM, summarize results of interest including item parameters, growth proportions, transition probabilities, transitional reliability, attribute correlations, model fit, and growth plots.

r-tidycensus 1.7.5
Propagated dependencies: r-xml2@1.5.0 r-units@1.0-0 r-tigris@2.2.1 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-stringr@1.6.0 r-sf@1.0-23 r-rvest@1.0.5 r-rlang@1.1.6 r-readr@2.1.6 r-rappdirs@0.3.3 r-purrr@1.2.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4 r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://walker-data.com/tidycensus/
Licenses: Expat
Build system: r
Synopsis: Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames
Description:

An integrated R interface to several United States Census Bureau APIs (<https://www.census.gov/data/developers/data-sets.html>) and the US Census Bureau's geographic boundary files. Allows R users to return Census and ACS data as tidyverse-ready data frames, and optionally returns a list-column with feature geometry for mapping and spatial analysis.

r-tidyjson 0.3.3.1
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-dplyr@1.1.4 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/colearendt/tidyjson
Licenses: Expat
Build system: r
Synopsis: Tidy Complex 'JSON'
Description:

Turn complex JSON data into tidy data frames.

r-tigers 0.1-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/emmanuelparadis/tigers
Licenses: GPL 3
Build system: r
Synopsis: Integration of Geography, Environment, and Remote Sensing
Description:

Handling and manipulation polygons, coordinates, and other geographical objects. The tools include: polygon areas, barycentric and trilinear coordinates (Hormann and Floater, 2006, <doi:10.1145/1183287.1183295>), convex hull for polygons (Graham and Yao, 1983, <doi:10.1016/0196-6774(83)90013-5>), polygon triangulation (Toussaint, 1991, <doi:10.1007/BF01905693>), great circle and geodesic distances, Hausdorff distance, and reduced major axis.

r-tspredit 1.2.767
Propagated dependencies: r-wavelets@0.3-0.2 r-randomforest@4.7-1.2 r-nnet@7.3-20 r-mfilter@0.1-5 r-kfas@1.6.0 r-hht@2.1.6 r-forecast@8.24.0 r-fnn@1.1.4.1 r-elmnnrcpp@1.0.5 r-e1071@1.7-16 r-dplyr@1.1.4 r-desctools@0.99.60 r-daltoolbox@1.3.717
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cefet-rj-dal.github.io/tspredit/
Licenses: Expat
Build system: r
Synopsis: Time Series Prediction with Integrated Tuning
Description:

Time series prediction is a critical task in data analysis, requiring not only the selection of appropriate models, but also suitable data preprocessing and tuning strategies. TSPredIT (Time Series Prediction with Integrated Tuning) is a framework that provides a seamless integration of data preprocessing, decomposition, model training, hyperparameter optimization, and evaluation. Unlike other frameworks, TSPredIT emphasizes the co-optimization of both preprocessing and modeling steps, improving predictive performance. It supports a variety of statistical and machine learning models, filtering techniques, outlier detection, data augmentation, and ensemble strategies. More information is available in Salles et al. <doi:10.1007/978-3-662-68014-8_2>.

r-tabbycat 0.18.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-janitor@2.2.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tabbycat
Licenses: Expat
Build system: r
Synopsis: Tabulate and Summarise Categorical Data
Description:

This package provides functions for tabulating and summarising categorical variables. Most functions are designed to work with dataframes, and use the tidyverse idiom of taking the dataframe as the first argument so they work within pipelines. Equivalent functions that operate directly on vectors are also provided where it makes sense. This package aims to make exploratory data analysis involving categorical variables quicker, simpler and more robust.

r-toomanycellsr 0.1.1.0
Propagated dependencies: r-matrix@1.7-4 r-jsonlite@2.0.0 r-imager@1.0.5 r-ggplot2@4.0.1 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TooManyCellsR
Licenses: GPL 3
Build system: r
Synopsis: An R Wrapper for 'TooManyCells'
Description:

An R wrapper for using TooManyCells', a command line program for clustering, visualizing, and quantifying cell clade relationships. See <https://gregoryschwartz.github.io/too-many-cells/> for more details.

r-tican 1.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/sjtingle/tican
Licenses: Expat
Build system: r
Synopsis: Plot and Analyse Time-Intensity Data
Description:

Plots and analyzes time-intensity curve data, such as data from (contrast-enhanced) ultrasound. Values such as peak intensity, time to peak, area under the curve, wash in rate and wash out rate are calculated.

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