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Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-treebase 0.1.5
Propagated dependencies: r-xml@3.99-0.20 r-rcurl@1.98-1.17 r-httr@1.4.7 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://docs.ropensci.org/treebase/
Licenses: CC0
Build system: r
Synopsis: Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
Description:

Interface to the API for TreeBASE <http://treebase.org> from R. TreeBASE is a repository of user-submitted phylogenetic trees (of species, population, or genes) and the data used to create them.

r-tidyusmacro 0.1.0
Propagated dependencies: r-tidyr@1.3.1 r-stringi@1.8.7 r-rlang@1.1.6 r-readr@2.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tidyusmacro
Licenses: Expat
Build system: r
Synopsis: Downloading and Cleaning U.S. Macroeconomic Data
Description:

Utilities to retrieve and tidy U.S. macroeconomic data series from public government data providers. Functions streamline access to series from the Federal Reserve Bank of St. Louis Federal Reserve Economic Data (FRED), the Bureau of Labor Statistics flat files, and the Bureau of Economic Analysis National Income and Product Accounts tables, then return consistent, tidy data frames ready for modeling and graphics. The package includes helpers for date alignment, log-linear projections, and common macro diagnostics, along with convenience plot builders for quick publication-quality charts.

r-tsqca 1.2.0
Propagated dependencies: r-qca@3.23
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/im-research-yt/TSQCA
Licenses: Expat
Build system: r
Synopsis: Threshold Sweep Extensions for Qualitative Comparative Analysis
Description:

This package provides threshold sweep methods for Qualitative Comparative Analysis (QCA). Implements Condition Threshold Sweep-Single (CTS-S), Condition Threshold Sweep-Multiple (CTS-M), Outcome Threshold Sweep (OTS), and Dual Threshold Sweep (DTS) for systematic exploration of threshold calibration effects on crisp-set QCA results. These methods extend traditional robustness approaches by treating threshold variation as an exploratory tool for discovering causal structures. Built on top of the QCA package by Dusa (2019) <doi:10.1007/978-3-319-75668-4>, with function arguments following QCA conventions. Based on set-theoretic methods by Ragin (2008) <doi:10.7208/chicago/9780226702797.001.0001> and established robustness protocols by Rubinson et al. (2019) <doi:10.1177/00491241211036158>.

r-theftdlc 0.2.1
Propagated dependencies: r-umap@0.2.10.0 r-tidyr@1.3.1 r-tibble@3.3.0 r-theft@0.8.2 r-scales@1.4.0 r-rtsne@0.17 r-rlang@1.1.6 r-reshape2@1.4.5 r-purrr@1.2.0 r-normaliser@0.1.2 r-mclust@6.1.2 r-mass@7.3-65 r-janitor@2.2.1 r-glmnet@4.1-10 r-ggplot2@4.0.1 r-future@1.68.0 r-furrr@0.3.1 r-e1071@1.7-16 r-dplyr@1.1.4 r-correctr@0.3.1 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://hendersontrent.github.io/theftdlc/
Licenses: Expat
Build system: r
Synopsis: Analyse and Interpret Time Series Features
Description:

This package provides a suite of functions for analysing, interpreting, and visualising time-series features calculated from different feature sets from the theft package. Implements statistical learning methodologies described in Henderson, T., Bryant, A., and Fulcher, B. (2023) <doi:10.48550/arXiv.2303.17809>.

r-table1 1.5.1
Propagated dependencies: r-yaml@2.3.10 r-knitr@1.50 r-htmltools@0.5.8.1 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/benjaminrich/table1
Licenses: GPL 3
Build system: r
Synopsis: Tables of Descriptive Statistics in HTML
Description:

Create HTML tables of descriptive statistics, as one would expect to see as the first table (i.e. "Table 1") in a medical/epidemiological journal article.

r-twingp 1.0.0
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-nloptr@2.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=twingp
Licenses: ASL 2.0
Build system: r
Synopsis: Fast Global-Local Gaussian Process Approximation
Description:

This package provides a global-local approximation framework for large-scale Gaussian process modeling. Please see Vakayil and Joseph (2024) <doi:10.1080/00401706.2023.2296451> for details. This work is supported by U.S. NSF grants CMMI-1921646 and DMREF-1921873.

r-tsir 0.4.3
Propagated dependencies: r-reshape2@1.4.5 r-kernlab@0.9-33 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tsiR
Licenses: GPL 3
Build system: r
Synopsis: An Implementation of the TSIR Model
Description:

An implementation of the time-series Susceptible-Infected-Recovered (TSIR) model using a number of different fitting options for infectious disease time series data. The manuscript based on this package can be found here <doi:10.1371/journal.pone.0185528>. The method implemented here is described by Finkenstadt and Grenfell (2000) <doi:10.1111/1467-9876.00187>.

r-tinycodet 0.5.8
Propagated dependencies: r-stringi@1.8.7 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/tony-aw/tinycodet/
Licenses: Expat
Build system: r
Synopsis: Functions to Help in your Coding Etiquette
Description:

Adds some functions to help in your coding etiquette. tinycodet primarily focuses on 4 aspects. 1) Safer decimal (in)equality testing, standard-evaluated alternatives to with() and aes(), and other functions for safer coding. 2) A new package import system, that attempts to combine the benefits of using a package without attaching it, with the benefits of attaching a package. 3) Extending the string manipulation capabilities of the stringi R package. 4) Reducing repetitive code. Besides linking to Rcpp', tinycodet has only one other dependency, namely stringi'.

r-trendsegmentr 1.3.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=trendsegmentR
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Linear Trend Segmentation
Description:

This package performs the detection of linear trend changes for univariate time series by implementing the bottom-up unbalanced wavelet transformation proposed by H. Maeng and P. Fryzlewicz (2023). The estimated number and locations of the change-points are returned with the piecewise-linear estimator for signal.

r-tidyrules 0.2.7
Propagated dependencies: r-tidytable@0.11.2 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-purrr@1.2.0 r-proxy@0.4-27 r-pheatmap@1.0.13 r-partykit@1.2-24 r-metricsweighted@1.0.4 r-magrittr@2.0.4 r-glue@1.8.0 r-generics@0.1.4 r-desctools@0.99.60 r-data-table@1.17.8 r-cli@3.6.5 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/talegari/tidyrules
Licenses: GPL 3
Build system: r
Synopsis: Utilities to Retrieve Rulelists from Model Fits, Filter, Prune, Reorder and Predict on Unseen Data
Description:

This package provides a framework to work with decision rules. Rules can be extracted from supported models, augmented with (custom) metrics using validation data, manipulated using standard dataframe operations, reordered and pruned based on a metric, predict on unseen (test) data. Utilities include; Creating a rulelist manually, Exporting a rulelist as a SQL case statement and so on. The package offers two classes; rulelist and ruleset based on dataframe.

r-tedm 1.2
Propagated dependencies: r-rcppthread@2.2.0 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://stscl.github.io/tEDM/
Licenses: GPL 3
Build system: r
Synopsis: Temporal Empirical Dynamic Modeling
Description:

Inferring causation from time series data through empirical dynamic modeling (EDM), with methods such as convergent cross mapping from Sugihara et al. (2012) <doi:10.1126/science.1227079>, partial cross mapping as outlined in Leng et al. (2020) <doi:10.1038/s41467-020-16238-0>, and cross mapping cardinality as described in Tao et al. (2023) <doi:10.1016/j.fmre.2023.01.007>.

r-tgs 1.0.1
Propagated dependencies: r-rjson@0.2.23 r-minet@3.68.0 r-ggm@2.5.2 r-foreach@1.5.2 r-doparallel@1.0.17 r-bnstruct@1.0.15
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://www.biorxiv.org/content/early/2018/06/14/272484
Licenses: FSDG-compatible
Build system: r
Synopsis: Rapid Reconstruction of Time-Varying Gene Regulatory Networks
Description:
Rapid advancements in high-throughput gene sequencing technologies have resulted in genome-scale time-series datasets. Uncovering the underlying temporal sequence of gene regulatory events in the form of time-varying gene regulatory networks demands accurate and computationally efficient algorithms. Such an algorithm is TGS'. It is proposed in Saptarshi Pyne, Alok Ranjan Kumar, and Ashish Anand. Rapid reconstruction of time-varying gene regulatory networks. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 17(1):278{291, Jan-Feb 2020. The TGS algorithm is shown to consume only 29 minutes for a microarray dataset with 4028 genes. This package provides an implementation of the TGS algorithm and its variants.
r-tpmsm 1.2.14
Propagated dependencies: r-kernsmooth@2.23-26
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/arturstat/TPmsm
Licenses: GPL 3
Build system: r
Synopsis: Estimation of Transition Probabilities in Multistate Models
Description:

Estimation of transition probabilities for the illness-death model and or the three-state progressive model.

r-tornado 0.1.3
Propagated dependencies: r-survival@3.8-3 r-scales@1.4.0 r-rlang@1.1.6 r-gridextra@2.3 r-ggplot2@4.0.1 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/bertcarnell/tornado
Licenses: GPL 3
Build system: r
Synopsis: Plots for Model Sensitivity and Variable Importance
Description:

Draws tornado plots for model sensitivity to univariate changes. Implements methods for many modeling methods including linear models, generalized linear models, survival regression models, and arbitrary machine learning models in the caret package. Also draws variable importance plots.

r-tpxg 1.0
Propagated dependencies: r-rfast2@0.1.5.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TPXG
Licenses: GPL 2+
Build system: r
Synopsis: Two Parameter Xgamma & Poisson Xgamma: Regression & Distribution Functions
Description:

The two-parameter Xgamma and Poisson Xgamma distributions are analyzed, covering standard distribution and regression functions, maximum likelihood estimation, quantile functions, probability density and mass functions, cumulative distribution functions, and random number generation. References include: "Sen, S., Chandra, N. and Maiti, S. S. (2018). On properties and applications of a two-parameter XGamma distribution. Journal of Statistical Theory and Applications, 17(4): 674--685. <doi:10.2991/jsta.2018.17.4.9>." "Wani, M. A., Ahmad, P. B., Para, B. A. and Elah, N. (2023). A new regression model for count data with applications to health care data. International Journal of Data Science and Analytics. <doi:10.1007/s41060-023-00453-1>.".

r-txtq 0.2.4
Propagated dependencies: r-r6@2.6.1 r-filelock@1.0.3 r-base64url@1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/wlandau/txtq
Licenses: Expat
Build system: r
Synopsis: Small Message Queue for Parallel Processes
Description:

This queue is a data structure that lets parallel processes send and receive messages, and it can help coordinate the work of complicated parallel tasks. Processes can push new messages to the queue, pop old messages, and obtain a log of all the messages ever pushed. File locking preserves the integrity of the data even when multiple processes access the queue simultaneously.

r-tacmagic 0.3.1
Propagated dependencies: r-r-matlab@3.7.0 r-pracma@2.4.6
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/ropensci/tacmagic
Licenses: GPL 3
Build system: r
Synopsis: Positron Emission Tomography Time-Activity Curve Analysis
Description:

To facilitate the analysis of positron emission tomography (PET) time activity curve (TAC) data, and to encourage open science and replicability, this package supports data loading and analysis of multiple TAC file formats. Functions are available to analyze loaded TAC data for individual participants or in batches. Major functionality includes weighted TAC merging by region of interest (ROI), calculating models including standardized uptake value ratio (SUVR) and distribution volume ratio (DVR, Logan et al. 1996 <doi:10.1097/00004647-199609000-00008>), basic plotting functions and calculation of cut-off values (Aizenstein et al. 2008 <doi:10.1001/archneur.65.11.1509>). Please see the walkthrough vignette for a detailed overview of tacmagic functions.

r-tfrmt 0.3.0
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stringi@1.8.7 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-gt@1.3.0 r-glue@1.8.0 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://GSK-Biostatistics.github.io/tfrmt/
Licenses: FSDG-compatible
Build system: r
Synopsis: Applies Display Metadata to Analysis Results Datasets
Description:

This package creates a framework to store and apply display metadata to Analysis Results Datasets (ARDs). The use of tfrmt allows users to define table format and styling without the data, and later apply the format to the data.

r-twang 2.6.2
Propagated dependencies: r-xtable@1.8-4 r-xgboost@1.7.11.1 r-survey@4.4-8 r-matrixmodels@0.5-4 r-latticeextra@0.6-31 r-lattice@0.22-7 r-ggplot2@4.0.1 r-gbm@2.2.2 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=twang
Licenses: GPL 3 FSDG-compatible
Build system: r
Synopsis: Toolkit for Weighting and Analysis of Nonequivalent Groups
Description:

This package provides functions for propensity score estimating and weighting, nonresponse weighting, and diagnosis of the weights.

r-tidydann 1.0.1
Propagated dependencies: r-tibble@3.3.0 r-parsnip@1.3.3 r-generics@0.1.4 r-dials@1.4.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/gmcmacran/tidydann
Licenses: Expat
Build system: r
Synopsis: Add the 'dann' Model and the 'sub_dann' Model to the Tidymodels Ecosystem
Description:

This package provides model specifications, tuning parameters for models in dann package. Models based on Hastie (1996) <https://web.stanford.edu/~hastie/Papers/dann_IEEE.pdf>.

r-trc 0.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://sites.google.com/site/dhyeonyu/software
Licenses: GPL 2+
Build system: r
Synopsis: Truncated Rank Correlation
Description:

This package provides a new measure of similarity between a pair of mass spectrometry (MS) experiments, called truncated rank correlation (TRC). To provide a robust metric of similarity in noisy high-dimensional data, TRC uses truncated top ranks (or top m-ranks) for calculating correlation. Truncated rank correlation as a robust measure of test-retest reliability in mass spectrometry data. For more details see Lim et al. (2019) <doi:10.1515/sagmb-2018-0056>.

r-testingsimilarity 1.1
Propagated dependencies: r-lattice@0.22-7 r-dosefinding@1.4-1 r-alabama@2023.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TestingSimilarity
Licenses: GPL 3
Build system: r
Synopsis: Bootstrap Test for the Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation
Description:

This package provides a bootstrap test which decides whether two dose response curves can be assumed as equal concerning their maximum absolute deviation. A plenty of choices for the model types are available, which can be found in the DoseFinding package, which is used for the fitting of the models. See <doi:10.1080/01621459.2017.1281813> for details.

r-textdata 0.4.5
Propagated dependencies: r-tibble@3.3.0 r-readr@2.1.6 r-rappdirs@0.3.3 r-fs@1.6.6
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://emilhvitfeldt.github.io/textdata/
Licenses: Expat
Build system: r
Synopsis: Download and Load Various Text Datasets
Description:

This package provides a framework to download, parse, and store text datasets on the disk and load them when needed. Includes various sentiment lexicons and labeled text data sets for classification and analysis.

r-typer 0.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://Fgazzelloni.github.io/typeR/
Licenses: Expat
Build system: r
Synopsis: Simulate Typing Script
Description:

Simulates typing of R script files for presentations and demonstrations. Provides character-by-character animation with optional live code execution. Supports R scripts (.R), R Markdown (.Rmd), and Quarto (.qmd) documents.

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