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Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

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where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel search send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-treespace 1.1.4.4
Propagated dependencies: r-shinybs@0.65.0 r-shiny@1.13.0 r-scatterd3@1.0.1 r-rlumshiny@0.2.7 r-rgl@1.3.36 r-rcpp@1.1.1-1.1 r-phytools@2.5-2 r-phangorn@2.12.1 r-mass@7.3-65 r-htmlwidgets@1.6.4 r-fields@17.3 r-distory@1.4.5 r-combinat@0.0-8 r-ape@5.8-1 r-adegraphics@1.0-22 r-adegenet@2.1.11 r-ade4@1.7-24
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=treespace
Licenses: Expat
Build system: r
Synopsis: Statistical Exploration of Landscapes of Phylogenetic Trees
Description:

This package provides tools for the exploration of distributions of phylogenetic trees. This package includes a shiny interface which can be started from R using treespaceServer(). For further details see Jombart et al. (2017) <DOI:10.1111/1755-0998.12676>.

r-tbox 0.2.2
Propagated dependencies: r-rmarkdown@2.31 r-knitr@1.51 r-clipr@0.8.0 r-checkmate@2.3.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/TanguyBarthelemy/TBox
Licenses: Expat
Build system: r
Synopsis: Useful Functions for Programming and Generating Documents
Description:

This package provides tools to help developers and producers manipulate R objects and outputs. It includes tools for displaying results and objects, and for formatting them in the correct format.

r-tidyrules 0.2.7
Propagated dependencies: r-tidytable@0.11.2 r-tibble@3.3.1 r-stringr@1.6.0 r-rlang@1.2.0 r-purrr@1.2.2 r-proxy@0.4-29 r-pheatmap@1.0.13 r-partykit@1.2-27 r-metricsweighted@1.0.4 r-magrittr@2.0.5 r-glue@1.8.1 r-generics@0.1.4 r-desctools@0.99.60 r-data-table@1.18.4 r-cli@3.6.6 r-checkmate@2.3.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/talegari/tidyrules
Licenses: GPL 3
Build system: r
Synopsis: Utilities to Retrieve Rulelists from Model Fits, Filter, Prune, Reorder and Predict on Unseen Data
Description:

This package provides a framework to work with decision rules. Rules can be extracted from supported models, augmented with (custom) metrics using validation data, manipulated using standard dataframe operations, reordered and pruned based on a metric, predict on unseen (test) data. Utilities include; Creating a rulelist manually, Exporting a rulelist as a SQL case statement and so on. The package offers two classes; rulelist and ruleset based on dataframe.

r-trampr 1.0-10
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/richfitz/TRAMPR
Licenses: GPL 2
Build system: r
Synopsis: 'TRFLP' Analysis and Matching Package for R
Description:

Matching terminal restriction fragment length polymorphism ('TRFLP') profiles between unknown samples and a database of known samples. TRAMPR facilitates analysis of many unknown profiles at once, and provides tools for working directly with electrophoresis output through to generating summaries suitable for community analyses with R's rich set of statistical functions. TRAMPR also resolves the issues of multiple TRFLP profiles within a species, and shared TRFLP profiles across species.

r-tempted 0.1.1
Propagated dependencies: r-np@0.70-2 r-ggplot2@4.0.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/pixushi/tempted
Licenses: GPL 3
Build system: r
Synopsis: Temporal Tensor Decomposition, a Dimensionality Reduction Tool for Longitudinal Multivariate Data
Description:

TEMPoral TEnsor Decomposition (TEMPTED), is a dimension reduction method for multivariate longitudinal data with varying temporal sampling. It formats the data into a temporal tensor and decomposes it into a summation of low-dimensional components, each consisting of a subject loading vector, a feature loading vector, and a continuous temporal loading function. These loadings provide a low-dimensional representation of subjects or samples and can be used to identify features associated with clusters of subjects or samples. TEMPTED provides the flexibility of allowing subjects to have different temporal sampling, so time points do not need to be binned, and missing time points do not need to be imputed.

r-tumgr 0.0.4
Propagated dependencies: r-minpack-lm@1.2-4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://wilkersj.shinyapps.io/tumgrShiny
Licenses: Expat
Build system: r
Synopsis: Tumor Growth Rate Analysis
Description:

This package provides a tool to obtain tumor growth rates from clinical trial patient data. Output includes individual and summary data for tumor growth rate estimates as well as optional plots of the observed and predicted tumor quantity over time.

r-tohm 1.4
Propagated dependencies: r-rmpfr@1.1-2 r-nloptr@2.2.1 r-matrix@1.7-5 r-igraph@2.3.1 r-eql@1.0-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TOHM
Licenses: GPL 2
Build system: r
Synopsis: Testing One Hypothesis Multiple Times
Description:

Approximations of global p-values when testing hypothesis in presence of non-identifiable nuisance parameters. The method relies on the Euler characteristic heuristic and the expected Euler characteristic is efficiently computed by in Algeri and van Dyk (2018) <arXiv:1803.03858>.

r-tfunhddc 1.0.2
Propagated dependencies: r-tclust@2.2-0 r-stringr@1.6.0 r-mass@7.3-65 r-fda-usc@2.2.0 r-fda@6.3.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TFunHDDC
Licenses: GPL 3
Build system: r
Synopsis: Clustering of Functional Data via Mixtures of t-Distributions
Description:

Extension of funHDDC Schmutz et al. (2018) <doi:10.1007/s00180-020-00958-4> for cases including outliers by fitting t-distributions for robust groups. TFunHDDC can cluster univariate or multivariate data produced by the fda package for data using a b-splines or Fourier basis.

r-tdavec 0.1.41
Propagated dependencies: r-rcpparmadillo@15.2.6-1 r-rcpp@1.1.1-1.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/uislambekov/TDAvec
Licenses: GPL 2+
Build system: r
Synopsis: Vector Summaries of Persistence Diagrams
Description:

This package provides tools for computing various vector summaries of persistence diagrams studied in Topological Data Analysis. For improved computational efficiency, all code for the vector summaries is written in C++ using the Rcpp and RcppArmadillo packages.

r-tulip 1.0.2
Propagated dependencies: r-tensr@1.0.2 r-matrix@1.7-5 r-mass@7.3-65 r-glmnet@5.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TULIP
Licenses: GPL 2
Build system: r
Synopsis: Toolbox for Linear Discriminant Analysis with Penalties
Description:

Integrates several popular high-dimensional methods based on Linear Discriminant Analysis (LDA) and provides a comprehensive and user-friendly toolbox for linear, semi-parametric and tensor-variate classification as mentioned in Yuqing Pan, Qing Mai and Xin Zhang (2019) <arXiv:1904.03469>. Functions are included for covariate adjustment, model fitting, cross validation and prediction.

r-tidyprompt 0.4.0
Propagated dependencies: r-stringr@1.6.0 r-s7@0.2.2 r-rlang@1.2.0 r-r6@2.6.1 r-jsonlite@2.0.0 r-httr2@1.2.2 r-glue@1.8.1 r-dplyr@1.2.1 r-cli@3.6.6
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/KennispuntTwente/tidyprompt
Licenses: GPL 3+ FSDG-compatible
Build system: r
Synopsis: Prompt Large Language Models and Enhance Their Functionality
Description:

Easily construct prompts and associated logic for interacting with large language models (LLMs). tidyprompt introduces the concept of prompt wraps, which are building blocks that you can use to quickly turn a simple prompt into a complex one. Prompt wraps do not just modify the prompt text, but also add extraction and validation functions that will be applied to the response of the LLM. This ensures that the user gets the desired output. tidyprompt can add various features to prompts and their evaluation by LLMs, such as structured output, automatic feedback, retries, reasoning modes, autonomous R function calling, and R code generation and evaluation. It is designed to be compatible with any LLM provider that offers chat completion.

r-truncnormbayes 0.0.3
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.6.0 r-rstan@2.32.7 r-rdpack@2.6.6 r-rcppparallel@5.1.11-2 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.1-1.1 r-bh@1.90.0-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/mathurlabstanford/truncnormbayes
Licenses: GPL 3+
Build system: r
Synopsis: Estimates Moments for a Truncated Normal Distribution using 'Stan'
Description:

Finds the posterior modes for the mean and standard deviation for a truncated normal distribution with one or two known truncation points. The method used extends Bayesian methods for parameter estimation for a singly truncated normal distribution under the Jeffreys prior (see Zhou X, Giacometti R, Fabozzi FJ, Tucker AH (2014). "Bayesian estimation of truncated data with applications to operational risk measurement". <doi:10.1080/14697688.2012.752103>). This package additionally allows for a doubly truncated normal distribution.

r-taxizedb 0.3.2
Propagated dependencies: r-vroom@1.7.1 r-tibble@3.3.1 r-rsqlite@3.52.0 r-rlang@1.2.0 r-readr@2.2.0 r-magrittr@2.0.5 r-hoardr@0.5.5 r-dplyr@1.2.1 r-dbplyr@2.5.2 r-dbi@1.3.0 r-curl@7.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://docs.ropensci.org/taxizedb/
Licenses: Expat
Build system: r
Synopsis: Offline Access to Taxonomic Databases
Description:

Download taxonomic databases, convert them into SQLite format, and query them locally for fast, reliable, and reproducible access to taxonomic data.

r-tpn 1.12
Propagated dependencies: r-vgam@1.1-14 r-skewmlrm@1.7 r-rbe3@1.1 r-pracma@2.4.6 r-moments@0.14.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tpn
Licenses: GPL 2+
Build system: r
Synopsis: Truncated Positive Normal Model and Extensions
Description:

Provide data generation and estimation tools for the truncated positive normal (tpn) model discussed in Gomez, Olmos, Varela and Bolfarine (2018) <doi:10.1007/s11766-018-3354-x>, the slash tpn distribution discussed in Gomez, Gallardo and Santoro (2021) <doi:10.3390/sym13112164>, the bimodal tpn distribution discussed in Gomez et al. (2022) <doi:10.3390/sym14040665>, the flexible tpn model <doi:10.3390/math11214431> and the unit tpn distribution <doi:10.1016/j.chemolab.2025.105322>.

r-tutorial-helpers 0.6.1
Propagated dependencies: r-tibble@3.3.1 r-shiny@1.13.0 r-rvest@1.0.5 r-rstudioapi@0.18.0 r-rmarkdown@2.31 r-purrr@1.2.2 r-mime@0.13 r-learnr@0.11.6 r-jsonlite@2.0.0 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://ppbds.github.io/tutorial.helpers/
Licenses: Expat
Build system: r
Synopsis: Helper Functions for Creating Tutorials
Description:

Helper functions for creating, editing, and testing tutorials created with the learnr package. Provides a simple method for allowing students to download their answers to tutorial questions. For examples of its use, see the r4ds.tutorials package.

r-tpc 1.0
Propagated dependencies: r-pcalg@2.7-12 r-graph@1.90.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/bips-hb/tpc
Licenses: GPL 3+
Build system: r
Synopsis: Tiered PC Algorithm
Description:

Constraint-based causal discovery using the PC algorithm while accounting for a partial node ordering, for example a partial temporal ordering when the data were collected in different waves of a cohort study. Andrews RM, Foraita R, Didelez V, Witte J (2021) <arXiv:2108.13395> provide a guide how to use tpc to analyse cohort data.

r-textometry 0.1.7
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=textometry
Licenses: GPL 3+
Build system: r
Synopsis: Textual Data Analysis Package Used by the TXM Software
Description:

Statistical exploration of textual corpora using several methods from French Textometrie (new name of Lexicometrie') and French Data Analysis schools. It includes methods for exploring irregularity of distribution of lexicon features across text sets or parts of texts (Specificity analysis); multi-dimensional exploration (Factorial analysis), etc. Those methods are used in the TXM software.

r-tinyarray 2.4.3
Propagated dependencies: r-tibble@3.3.1 r-survminer@0.5.2 r-survival@3.8-6 r-stringr@1.6.0 r-pheatmap@1.0.13 r-patchwork@1.3.2 r-limma@3.68.3 r-hmisc@5.2-5 r-ggplot2@4.0.3 r-dplyr@1.2.1 r-clusterprofiler@4.20.0 r-biocmanager@1.30.27
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/xjsun1221/tinyarray
Licenses: Expat
Build system: r
Synopsis: Expression Data Analysis and Visualization
Description:

The Gene Expression Omnibus (<https://www.ncbi.nlm.nih.gov/geo/>) and The Cancer Genome Atlas (<https://portal.gdc.cancer.gov/>) are widely used medical public databases. Our platform integrates routine analysis and visualization tools for expression data to provide concise and intuitive data analysis and presentation.

r-tidecurves 0.0.5
Propagated dependencies: r-fields@17.3 r-data-table@1.18.4 r-chron@2.3-62
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TideCurves
Licenses: GPL 3
Build system: r
Synopsis: Analysis and Prediction of Tides
Description:

Tidal analysis of evenly spaced observed time series (time step 1 to 60 min) with or without shorter gaps using the harmonic representation of inequalities. The analysis should preferably cover an observation period of at least 19 years. For shorter periods low frequency constituents are not taken into account, in accordance with the Rayleigh-Criterion. The main objective of this package is to synthesize or predict a tidal time series.

r-teal-modules-clinical 0.12.0
Propagated dependencies: r-vistime@1.3.0 r-tern-mmrm@0.3.3 r-tern-gee@0.1.5 r-tern@0.9.10 r-teal-widgets@0.6.0 r-teal-transform@0.7.1 r-teal-reporter@0.6.1 r-teal-logger@0.4.1 r-teal-data@0.8.0 r-teal-code@0.7.1 r-teal@1.1.0 r-shinywidgets@0.9.1 r-shinyvalidate@0.1.3 r-shinyjs@2.1.1 r-shiny@1.13.0 r-scales@1.4.0 r-rtables@0.6.16 r-rmarkdown@2.31 r-rlistings@0.2.13 r-lifecycle@1.0.5 r-ggrepel@0.9.8 r-ggplot2@4.0.3 r-formatters@0.5.12 r-dt@0.34.0 r-dplyr@1.2.1 r-cowplot@1.2.0 r-checkmate@2.3.4 r-bslib@0.11.0 r-broom@1.0.13
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://insightsengineering.github.io/teal.modules.clinical/
Licenses: ASL 2.0
Build system: r
Synopsis: 'teal' Modules for Standard Clinical Outputs
Description:

This package provides user-friendly tools for creating and customizing clinical trial reports. By leveraging the teal framework, this package provides teal modules to easily create an interactive panel that allows for seamless adjustments to data presentation, thereby streamlining the creation of detailed and accurate reports.

r-topicmodels-etm 0.1.1
Propagated dependencies: r-torch@0.17.0 r-matrix@1.7-5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/bnosac/ETM
Licenses: Expat
Build system: r
Synopsis: Topic Modelling in Embedding Spaces
Description:

Find topics in texts which are semantically embedded using techniques like word2vec or Glove. This topic modelling technique models each word with a categorical distribution whose natural parameter is the inner product between a word embedding and an embedding of its assigned topic. The techniques are explained in detail in the paper Topic Modeling in Embedding Spaces by Adji B. Dieng, Francisco J. R. Ruiz, David M. Blei (2019), available at <doi:10.48550/arXiv.1907.04907>.

r-tttensor 1.0.2
Propagated dependencies: r-rtensor@1.5.0 r-ptak@2.0.0 r-matrix@1.7-5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/rikenbit/ttTensor
Licenses: Expat
Build system: r
Synopsis: Tensor-Train Decomposition
Description:

Tensor-train is a compact representation for higher-order tensors. Some algorithms for performing tensor-train decomposition are available such as TT-SVD, TT-WOPT, and TT-Cross. For the details of the algorithms, see I. V. Oseledets (2011) <doi:10.1137/090752286>, Yuan Longao, et al (2017) <doi:10.48550/arXiv.1709.02641>, I. V. Oseledets (2010) <doi:10.1016/j.laa.2009.07.024>.

r-taber 0.1.2
Propagated dependencies: r-magrittr@2.0.5 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/restonslacker/taber
Licenses: Modified BSD
Build system: r
Synopsis: Split and Recombine Your Data
Description:

Sometimes you need to split your data and work on the two chunks independently before bringing them back together. Taber allows you to do that with its two functions.

r-tinyspotifyr 0.2.3
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/cornball-ai/tinyspotifyr
Licenses: Expat
Build system: r
Synopsis: Tinyverse R Wrapper for the 'Spotify' Web API
Description:

An R wrapper for the Spotify Web API <https://developer.spotify.com/web-api/>.

Total packages: 22167