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Utilities for verifying discrete, continuous and probabilistic forecasts, and forecasts expressed as parametric distributions are included.
Traces information spread through interactions between features, utilising information theory measures and a higher-order generalisation of the concept of widest paths in graphs. In particular, vistla can be used to better understand the results of high-throughput biomedical experiments, by organising the effects of the investigated intervention in a tree-like hierarchy from direct to indirect ones, following the plausible information relay circuits. Due to its higher-order nature, vistla can handle multi-modality and assign multiple roles to a single feature.
This package provides a set of wrapper functions for Visa Chart Components'. Visa Chart Components <https://github.com/visa/visa-chart-components> is an accessibility focused, framework agnostic set of data experience design systems components for the web.
Manage, provision and use Virtual Machines pre-configured for R. Develop, test and build package in a clean environment. Vagrant tool and a provider (such as Virtualbox') have to be installed.
This package provides a visualization for characterizing subgroups defined by a decision tree structure. The visualization simplifies the ability to interpret individual pathways to subgroups; each sub-plot describes the distribution of observations within individual terminal nodes and percentile ranges for the associated inner nodes.
This package provides a versatile range of functions, including exploratory data analysis, time-series analysis, organizational network analysis, and data validation, whilst at the same time implements a set of best practices in analyzing and visualizing data specific to Microsoft Viva Insights'.
This package provides tools to analyze vaccine coverage data and simulate potential disease outbreak scenarios. It allows users to calculate key epidemiological metrics such as the effective reproduction number (Re), outbreak probabilities, and expected infection counts based on county-level vaccination rates, disease characteristics, and vaccine effectiveness. The package includes historical kindergarten vaccination data for Florida counties and offers functions for generating summary tables, visualizations, and exporting the underlying plot data.
This package provides tools for the statistical analysis of regular vine copula models, see Aas et al. (2009) <doi:10.1016/j.insmatheco.2007.02.001> and Dissman et al. (2013) <doi:10.1016/j.csda.2012.08.010>. The package includes tools for parameter estimation, model selection, simulation, goodness-of-fit tests, and visualization. Tools for estimation, selection and exploratory data analysis of bivariate copula models are also provided.
Non-Domestic VAERS vaccine data for 01/01/2016 - 06/14/2016. If you want to explore the full VAERS data for 1990 - Present (data, symptoms, and vaccines), then check out the vaersND package from the URL below. The URL and BugReports below correspond to the vaersND package, of which vaersNDvax is a small subset (2016 only). vaersND is not hosted on CRAN due to the large size of the data set. To install the Suggested vaers and vaersND packages, use the following R code: devtools::install_git("https://gitlab.com/iembry/vaers.git", build_vignettes = TRUE) and devtools::install_git("https://gitlab.com/iembry/vaersND.git", build_vignettes = TRUE)'. "VAERS is a national vaccine safety surveillance program co-sponsored by the US Centers for Disease Control and Prevention (CDC) and the US Food and Drug Administration (FDA). VAERS is a post-marketing safety surveillance program, collecting information about adverse events (possible side effects) that occur after the administration of vaccines licensed for use in the United States." For more information about the data, visit <https://vaers.hhs.gov/index>. For information about vaccination/immunization hazards, visit <http://www.questionuniverse.com/rethink.html/#vaccine>.
This package provides an htmlwidgets interface to VChart.js'. VChart', more than just a cross-platform charting library, but also an expressive data storyteller. VChart examples and documentation are available here: <https://www.visactor.io/vchart>.
Describe in words the genealogical relationship between two members of a given pedigree, using the algorithm in Vigeland (2022) <doi:10.1186/s12859-022-04759-y>. verbalisr is part of the pedsuite collection of packages for pedigree analysis. For a demonstration of verbalisr', see the online app QuickPed at <https://magnusdv.shinyapps.io/quickped>.
An R client for the vatcheckapi.com VAT number validation API. The API requires registration of an API key. Basic features are free, some require a paid subscription. You can find the full API documentation at <https://vatcheckapi.com/docs> .
Realization of published methods to analyze visual field (VF) progression. Introduction to the plotting methods (designed by author TE) for VF output visualization. A sample dataset for two eyes, each with 10 follow-ups is included. The VF analysis methods could be found in -- Musch et al. (1999) <doi:10.1016/S0161-6420(99)90147-1>, Nouri-Mahdavi et at. (2012) <doi:10.1167/iovs.11-9021>, Schell et at. (2014) <doi:10.1016/j.ophtha.2014.02.021>, Aptel et al. (2015) <doi:10.1111/aos.12788>.
Rule sets with validation rules may contain redundancies or contradictions. Functions for finding redundancies and problematic rules are provided, given a set a rules formulated with validate'.
Vasicek density, cumulative distribution, quantile functions and random deviate generation of Vasicek distribution. In addition, there are two functions for fitting the Generalized Additive Models for Location Scale and Shape introduced by Rigby and Stasinopoulos (2005, <doi:10.1111/j.1467-9876.2005.00510.x>). Some functions are written in C++ using Rcpp', developed by Eddelbuettel and Francois (2011, <doi:10.18637/jss.v040.i08>).
The goal of vetiver is to provide fluent tooling to version, share, deploy, and monitor a trained model. Functions handle both recording and checking the model's input data prototype, and predicting from a remote API endpoint. The vetiver package is extensible, with generics that can support many kinds of models.
This package provides a method to visualize pharmacometric analyses which are impacted by covariate effects. Variability-aligned covariate harmonized-effects and time-transformation equivalent ('vachette') facilitates intuitive overlays of data and model predictions, allowing for comprehensive comparison without dilution effects. vachette improves upon previous methods Lommerse et al. (2021) <doi:10.1002/psp4.12679>, enabling its application to all pharmacometric models and enhancing Visual Predictive Checks (VPC) by integrating data into cohesive plots that can highlight model misspecification.
Wrapper around the City of Vancouver Open Data API <https://opendata.vancouver.ca/api/v2/console> to simplify and standardize access to City of Vancouver open data. Functionality to list the data catalogue and access data and geographic records.
Collection of common methods to determine growing season length in a simple manner. Start and end dates of the vegetation periods are calculated solely based on daily mean temperatures and the day of the year.
EQ-5D is a standard instrument (<https://euroqol.org/eq-5d-instruments/>) that measures the quality of life often used in clinical and economic evaluations of health care technologies. Both adult versions of EQ-5D (EQ-5D-3L and EQ-5D-5L) contain a descriptive system and visual analog scale. The descriptive system measures the patient's health in 5 dimensions: the 5L versions has 5 levels and 3L version has 3 levels. The descriptive system scores are usually converted to index values using country specific values sets (that incorporates the country preferences). This package allows the calculation of both descriptive system scores to the index value scores. The value sets for EQ-5D-3L are from the references mentioned in the website <https://euroqol.org/eq-5d-instruments/eq-5d-3l-about/valuation/> The value sets for EQ-5D-3L for a total of 31 countries are used for the valuation (see the user guide for a complete list of references). The value sets for EQ-5D-5L are obtained from references mentioned in the <https://euroqol.org/eq-5d-instruments/eq-5d-5l-about/valuation-standard-value-sets/> and other sources. The value sets for EQ-5D-5L for a total of 17 countries are used for the valuation (see the user guide for a complete list of references). The package can also be used to map 5L scores to 3L index values for 10 countries: Denmark, France, Germany, Japan, Netherlands, Spain, Thailand, UK, USA, and Zimbabwe. The value set and method for mapping are obtained from Van Hout et al (2012) <doi: 10.1016/j.jval.2012.02.008>.
An algorithm for nonlinear global optimization based on the variable neighbourhood trust region search (VNTRS) algorithm proposed by Bierlaire et al. (2009) "A Heuristic for Nonlinear Global Optimization" <doi:10.1287/ijoc.1090.0343>. The algorithm combines variable neighbourhood exploration with a trust-region framework to efficiently search the solution space. It can terminate a local search early if the iterates are converging toward a previously visited local optimum or if further improvement within the current region is unlikely. In addition to global optimization, the algorithm can also be applied to identify multiple local optima.
This package provides a comprehensive R interface to the VirusTotal API (v2 and v3), a Google service that analyzes files and URLs for viruses, worms, trojans and other malware. Features include file/URL scanning, domain categorization, passive DNS information, IP reputation analysis, and comment/voting systems. Implements rate limiting, error handling, and response validation for robust security analysis workflows.
Make it easy to use vue in R with helper dependency functions and examples.
This package provides a way of visualizing collections of time series and, optionally their future values, forecasts for their future values and prediction intervals for the forecasts. A web-based GUI can be used to display the information in a collection of time series.