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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-valuemap 2.0.4
Propagated dependencies: r-sf@1.0-23 r-leaflet@2.2.3 r-htmltools@0.5.8.1 r-h3jsr@1.3.1 r-dplyr@1.1.4 r-devtools@2.4.6
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/Curycu/valuemap
Licenses: GPL 3+
Build system: r
Synopsis: Making Choropleth Map
Description:

You can easily visualize your sf polygons or data.frame with h3 address. While leaflet package is too raw for data analysis, this package can save data analysts efforts & time with pre-set visualize options.

r-vitae 0.6.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://pkg.mitchelloharawild.com/vitae/
Licenses: GPL 3
Build system: r
Synopsis: Curriculum Vitae for R Markdown
Description:

This package provides templates and functions to simplify the production and maintenance of curriculum vitae.

r-variosig 0.3-1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=variosig
Licenses: GPL 3+
Build system: r
Synopsis: Testing Spatial Dependence Using Empirical Variogram
Description:

Applying Monte Carlo permutation to generate pointwise variogram envelope and checking for spatial dependence at different scales using permutation test. Empirical Brown's method and Fisher's method are used to compute overall p-value for hypothesis test.

r-valmetrics 1.0.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=valmetrics
Licenses: Expat
Build system: r
Synopsis: Metrics and Plots for Model Evaluation
Description:

This package provides functions for metrics and plots for model evaluation. Based on vectors of observed and predicted values. Method: Kristin Piikki, Johanna Wetterlind, Mats Soderstrom and Bo Stenberg (2021). <doi:10.1111/SUM.12694>.

r-volcanoplot 1.0.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=volcanoPlot
Licenses: Expat
Build system: r
Synopsis: Volcano Plot for Clinical Trial Adverse Events
Description:

Interactive adverse event (AE) volcano plot for monitoring clinical trial safety. This tool allows users to view the overall distribution of AEs in a clinical trial using standard (e.g. MedDRA preferred term) or custom (e.g. Gender) categories using a volcano plot similar to proposal by Zink et al. (2013) <doi:10.1177/1740774513485311>. This tool provides a stand-along shiny application and flexible shiny modules allowing this tool to be used as a part of more robust safety monitoring framework like the Shiny app from the safetyGraphics R package.

r-vsmi 0.1.0
Propagated dependencies: r-qif@1.5 r-mice@3.18.0 r-matrix@1.7-4 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=vsmi
Licenses: Expat
Build system: r
Synopsis: Variable Selection for Multiple Imputed Data
Description:

Penalized weighted least-squares estimate for variable selection on correlated multiply imputed data and penalized estimating equations for generalized linear models with multiple imputation. Reference: Li, Y., Yang, H., Yu, H., Huang, H., Shen, Y*. (2023) "Penalized estimating equations for generalized linear models with multiple imputation", <doi:10.1214/22-AOAS1721>. Li, Y., Yang, H., Yu, H., Huang, H., Shen, Y*. (2023) "Penalized weighted least-squares estimate for variable selection on correlated multiply imputed data", <doi:10.1093/jrsssc/qlad028>.

r-vov 0.1.2
Propagated dependencies: r-shiny@1.11.1 r-htmltools@0.5.8.1 r-glue@1.8.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/tyluRp/vov
Licenses: Expat
Build system: r
Synopsis: CSS Animations for 'shiny' Elements
Description:

This package provides a wrapper around a CSS library called vov.css', intended for use in shiny applications. Simply wrap a UI element in one of the animation functions to see it move.

r-verifyr2 1.1.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=verifyr2
Licenses: Expat
Build system: r
Synopsis: Compare and Verify File Contents
Description:

Extendable R6 file comparison classes, including a shiny app for combining the comparison functionality into a file comparison application. The package idea originates from pharma companies drug development processes, where statisticians and statistical programmers need to review and compare different versions of the same outputs and datasets. The package implementation itself is not tied to any specific industry and can be used in any context for easy file comparisons between different file version sets.

r-vaccinationimpact 0.1.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/Epiconcept-Paris/vaccinationimpact/
Licenses: Expat
Build system: r
Synopsis: Impact Study of Vaccination Campaigns
Description:

This package provides tools to estimate the impact of vaccination campaigns at population level (number of events averted, number of avertable events, number needed to vaccinate). Inspired by the methodology proposed by Foppa et al. (2015) <doi:10.1016/j.vaccine.2015.02.042> and Machado et al. (2019) <doi:10.2807/1560-7917.ES.2019.24.45.1900268> for influenza vaccination impact.

r-vispedigree 1.0.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/luansheng/visPedigree
Licenses: Expat
Build system: r
Synopsis: Tidying and Visualizing Animal Pedigrees
Description:

Built on graph theory and the high-performance data.table framework, this package provides a comprehensive suite of tools for tidying, analyzing, and visualizing animal pedigrees. By modeling pedigrees as directed acyclic graphs using igraph', it ensures robust loop detection, efficient generation assignment, and optimal sub-population splitting. Key features include standardizing pedigree formats, flexible ancestry tracing, and generating legible vector-based PDF graphs. A unique compaction algorithm enables the visualization of massive pedigrees by grouping full-sib families. Furthermore, the package implements high-performance C++ algorithms for calculating and visualizing genetic relationship matrices (A, D, AA, and their inverses) and inbreeding coefficients.

r-volumodel 0.2.3
Propagated dependencies: r-viridislite@0.4.2 r-terra@1.8-86 r-sf@1.0-23 r-rnaturalearth@1.1.0 r-rangebuilder@2.2 r-modeva@3.41 r-metr@0.18.3 r-ggtext@0.1.2 r-ggplot2@4.0.1 r-fields@17.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://hannahlowens.github.io/voluModel/
Licenses: GPL 3
Build system: r
Synopsis: Modeling Species Distributions in Three Dimensions
Description:

Facilitates modeling species ecological niches and geographic distributions based on occurrences and environments that have a vertical as well as horizontal component, and projecting models into three-dimensional geographic space. Working in three dimensions is useful in an aquatic context when the organisms one wishes to model can be found across a wide range of depths in the water column. The package also contains functions to automatically generate marine training model training regions using machine learning, and interpolate and smooth patchily sampled environmental rasters using thin plate splines. Davis Rabosky AR, Cox CL, Rabosky DL, Title PO, Holmes IA, Feldman A, McGuire JA (2016) <doi:10.1038/ncomms11484>. Nychka D, Furrer R, Paige J, Sain S (2021) <doi:10.5065/D6W957CT>. Pateiro-Lopez B, Rodriguez-Casal A (2022) <https://CRAN.R-project.org/package=alphahull>.

r-vegtable 0.1.10
Propagated dependencies: r-vegdata@1.9.15 r-taxlist@0.3.5 r-stringi@1.8.7 r-sp@2.2-0 r-qdapregex@0.7.10 r-foreign@0.8-90
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/kamapu/vegtable
Licenses: GPL 2+
Build system: r
Synopsis: Handling Vegetation Data Sets
Description:

Import and handling data from vegetation-plot databases, especially data stored in Turboveg 2 (<https://www.synbiosys.alterra.nl/turboveg/>). Also import/export routines for exchange of data with Juice (<https://www.sci.muni.cz/botany/juice/>) are implemented.

r-vcfppr 0.8.2
Dependencies: zlib@1.3.1 openssl@3.0.8 openssh@10.2p1 curl@8.6.0
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/Zilong-Li/vcfppR
Licenses: Expat
Build system: r
Synopsis: Rapid Manipulation of the Variant Call Format (VCF)
Description:

The vcfpp.h (<https://github.com/Zilong-Li/vcfpp>) provides an easy-to-use C++ API of htslib', offering full functionality for manipulating Variant Call Format (VCF) files. The vcfppR package serves as the R bindings of the vcfpp.h library, enabling rapid processing of both compressed and uncompressed VCF files. Explore a range of powerful features for efficient VCF data manipulation.

r-vamc 0.2.1
Propagated dependencies: r-rdpack@2.6.4
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=vamc
Licenses: GPL 2
Build system: r
Synopsis: Monte Carlo Valuation Framework for Variable Annuities
Description:

Implementation of a Monte Carlo simulation engine for valuing synthetic portfolios of variable annuities, which reflect realistic features of common annuity contracts in practice. It aims to facilitate the development and dissemination of research related to the efficient valuation of a portfolio of large variable annuities. The main valuation methodology was proposed by Gan (2017) <doi:10.1515/demo-2017-0021>.

r-vprint 1.2
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=vprint
Licenses: GPL 2+
Build system: r
Synopsis: More Flexible Form of Boolean Verbose
Description:

R functions are not supposed to print text without giving the user the option to turn the printing off or on using a Boolean verbose in a construct like if(verbose) print(...)'. But this black/white approach is rather rigid, and an approach with shades of gray might be more appropriate in many circumstances.

r-vtype 0.8
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=vtype
Licenses: GPL 3+
Build system: r
Synopsis: Estimates the Variable Type in Error Afflicted Data
Description:

Estimates the type of variables in non-quality controlled data. The prediction is based on a random forest model, trained on over 5000 medical variables with accuracy of 99%. The accuracy can hardy depend on type and coding style of data.

r-vapour 0.15.0
Dependencies: zlib@1.3.1 proj@9.3.1 pcre2@10.42 openssl@3.0.8 openssh@10.2p1 gdal@3.8.2 curl@8.6.0
Propagated dependencies: r-wk@0.9.4 r-stringr@1.6.0 r-rcpp@1.1.0 r-nanoarrow@0.7.0-1 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/hypertidy/vapour
Licenses: GPL 3
Build system: r
Synopsis: Access to the 'Geospatial Data Abstraction Library' ('GDAL')
Description:

This package provides low-level access to GDAL functionality. GDAL is the Geospatial Data Abstraction Library a translator for raster and vector geospatial data formats that presents a single raster abstract data model and single vector abstract data model to the calling application for all supported formats <https://gdal.org/>. This package is focussed on providing exactly and only what GDAL does, to enable developing further tools.

r-vewaning 1.4
Propagated dependencies: r-survival@3.8-3 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=VEwaning
Licenses: GPL 2
Build system: r
Synopsis: Vaccine Efficacy Over Time
Description:

This package implements methods for inference on potential waning of vaccine efficacy and for estimation of vaccine efficacy at a user-specified time after vaccination based on data from a randomized, double-blind, placebo-controlled vaccine trial in which participants may be unblinded and placebo subjects may be crossed over to the study vaccine. The methods also allow adjustment for possible confounding via inverse probability weighting through specification of models for the trial entry process, unblinding mechanisms, and the probability an unblinded placebo participant accepts study vaccine: Tsiatis, A. A. and Davidian, M. (2022) <doi:10.1111/biom.13509>.

r-vip 0.4.5
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/koalaverse/vip/
Licenses: GPL 2+
Build system: r
Synopsis: Variable Importance Plots
Description:

This package provides a general framework for constructing variable importance plots from various types of machine learning models in R. Aside from some standard model- specific variable importance measures, this package also provides model- agnostic approaches that can be applied to any supervised learning algorithm. These include 1) an efficient permutation-based variable importance measure, 2) variable importance based on Shapley values (Strumbelj and Kononenko, 2014) <doi:10.1007/s10115-013-0679-x>, and 3) the variance-based approach described in Greenwell et al. (2018) <doi:10.48550/arXiv.1805.04755>. A variance-based method for quantifying the relative strength of interaction effects is also included (see the previous reference for details).

r-varjmcm 0.1.1
Propagated dependencies: r-matrix@1.7-4 r-mass@7.3-65 r-jmcm@0.2.5 r-expm@1.0-0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=varjmcm
Licenses: GPL 2+
Build system: r
Synopsis: Estimations for the Covariance of Estimated Parameters in Joint Mean-Covariance Models
Description:

The goal of the package is to equip the jmcm package (current version 0.2.1) with estimations of the covariance of estimated parameters. Two methods are provided. The first method is to use the inverse of estimated Fisher's information matrix, see M. Pourahmadi (2000) <doi:10.1093/biomet/87.2.425>, M. Maadooliat, M. Pourahmadi and J. Z. Huang (2013) <doi:10.1007/s11222-011-9284-6>, and W. Zhang, C. Leng, C. Tang (2015) <doi:10.1111/rssb.12065>. The second method is bootstrap based, see Liu, R.Y. (1988) <doi:10.1214/aos/1176351062> for reference.

r-vasicek 0.0.3
Propagated dependencies: r-mvtnorm@1.3-3
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/statcompute/vasicek
Licenses: GPL 2+
Build system: r
Synopsis: Miscellaneous Functions for Vasicek Distribution
Description:

Provide a collection of miscellaneous R functions related to the Vasicek distribution with the intent to make the lives of risk modelers easier.

r-vagalumer 0.1.6
Propagated dependencies: r-stringr@1.6.0 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/r-music/vagalumeR
Licenses: GPL 2
Build system: r
Synopsis: Access to the 'Vagalume' API
Description:

This package provides access to the Vagalume API <https://api.vagalume.com.br>. The data extracted is basically lyrics of songs and information about artists/bands.

r-vdspcalibration 1.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=VDSPCalibration
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Statistical Methods for Designing and Analyzing a Calibration Study
Description:

This package provides statistical methods for the design and analysis of a calibration study, which aims for calibrating measurements using two different methods. The package includes sample size calculation, sample selection, regression analysis with error-in measurements and change-point regression. The method is described in Tian, Durazo-Arvizu, Myers, et al. (2014) <DOI:10.1002/sim.6235>.

r-vote 2.5-2
Propagated dependencies: r-knitr@1.50 r-formattable@0.2.1 r-fields@17.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=vote
Licenses: GPL 2+
Build system: r
Synopsis: Election Vote Counting
Description:

Counting election votes and determining election results by different methods, including the single transferable vote or ranked choice, approval, score, plurality, condorcet and two-round runoff methods (Raftery et al., 2021 <doi:10.32614/RJ-2021-086>).

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