_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel search send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


python-curryreader 0.1.2
Propagated dependencies: python-matplotlib@3.10.8 python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/mne-tools/curry-python-reader
Licenses: Modified BSD
Build system: pyproject
Synopsis: File reader for Compumedics Neuroscan data formats
Description:

This is an open-source tool which allows to load CURRY data into Python. It supports: raw float (.cdt), ascii (.cdt), legacy raw float (.dat) and legacy ascii (.dat).

python-elephant 1.1.1-0.db5a5f0
Propagated dependencies: python-jinja2@3.1.2 python-neo@0.14.3 python-numpy@2.3.1 python-quantities@0.16.4 python-scikit-learn@1.7.2 python-scipy@1.16.3 python-six@1.17.0 python-statsmodels@0.14.5 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://neuralensemble.org/elephant/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Analysis of electrophysiology data in Python
Description:

Elephant (Electrophysiology Analysis Toolkit) is an open-source, community centered library for the analysis of electrophysiological data in the Python programming language. The focus of Elephant is on generic analysis functions for spike train data and time series recordings from electrodes, such as the local field potentials (LFP) or intracellular voltages. In addition to providing a common platform for analysis code from different laboratories, the Elephant project aims to provide a consistent and homogeneous analysis framework that is built on a modular foundation. Elephant is the direct successor to Neurotools and maintains ties to complementary projects such as OpenElectrophy and spykeviewer.

python-bycycle 1.2.0
Propagated dependencies: python-matplotlib@3.10.8 python-neurodsp@2.3.0 python-numpy@2.3.1 python-pandas@2.3.3 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://bycycle-tools.github.io/
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Cycle-by-cycle analyses of neural oscillations
Description:

bycycle is a tool for quantifying features of neural oscillations in the time domain, as opposed to the frequency domain, using a cycle-by-cycle approach.

python-pycrostates 0.6.1
Propagated dependencies: python-decorator@5.2.1 python-jinja2@3.1.2 python-joblib@1.5.2 python-matplotlib@3.10.8 python-mne@1.11.0 python-numpy@2.3.1 python-packaging@25.0 python-pooch@1.8.1 python-psutil@7.0.0 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pycrostates.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Python package for EEG microstate segmentation
Description:

This package provides a simple open source Python package for EEG microstate segmentation.

python-yasa 0.6.5
Propagated dependencies: python-antropy@0.1.9 python-ipywidgets@8.1.4 python-joblib@1.5.2 python-lspopt@1.4.0 python-matplotlib@3.10.8 python-mne@1.11.0 python-numba@0.62.1 python-numpy@2.3.1 python-pandas@2.3.3 python-pyriemann@0.10 python-scikit-learn@1.7.2 python-scipy@1.16.3 python-seaborn@0.13.2 python-sleepecg@0.5.9 python-tensorpac@0.6.5-1.ac9058f
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://yasa-sleep.org/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Yet Another Spindle Algorithm (YASA)
Description:

YASA is a Python package to analyze polysomnographic sleep recordings.

python-pyxdf 1.17.1
Propagated dependencies: python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/xdf-modules/pyxdf
Licenses: FreeBSD
Build system: pyproject
Synopsis: Python library for importing XDF (Extensible Data Format)
Description:

XDF is a general-purpose container format for multi-channel time series data with extensive associated meta information. XDF is tailored towards biosignal data such as EEG, EMG, EOG, ECG, GSR, MEG, but it can also handle data with high sampling rate (like audio) or data with a high number of channels (like fMRI or raw video). Meta information is stored as XML.

python-pyriemann 0.10
Propagated dependencies: python-joblib@1.5.2 python-matplotlib@3.10.8 python-numpy@2.3.1 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pyriemann.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Machine learning for multivariate data with Riemannian geometry
Description:

pyRiemann is a Python machine learning package based on scikit-learn API. It provides a high-level interface for processing and classification of real (resp. complex)-valued multivariate data through the Riemannian geometry of symmetric (resp. Hermitian) positive definite (SPD) (resp. HPD) matrices.

python-kilosort 4.1.3
Propagated dependencies: python-faiss@1.10.0 python-matplotlib@3.10.8 python-numba@0.62.1 python-numpy@2.3.1 python-psutil@7.0.0 python-pyqtgraph@0.13.7 python-pyside-6@6.9.2 python-pytorch@2.10.0 python-qtpy@2.4.3 python-scikit-learn@1.7.2 python-scipy@1.16.3 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/MouseLand/kilosort
Licenses: Modified BSD
Build system: pyproject
Synopsis: spike sorting pipeline
Description:

spike sorting pipeline.

python-picard 0.8.1
Propagated dependencies: python-numpy@2.3.1 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mind-inria.github.io/picard
Licenses: Modified BSD
Build system: pyproject
Synopsis: Preconditoned ICA for Real Data
Description:

Picard provides Python/Octave/MATLAB code for the preconditionned ICA for real data.

python-mffpy 0.10.0
Propagated dependencies: python-deprecated@1.3.1 python-lxml@6.0.1 python-numpy@2.3.1 python-pytz@2025.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/BEL-Public/mffpy
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Reader and Writer for Philips' MFF file format
Description:

mffpy is a lean reader for EGI's MFF file format. These files are directories containing several files of mostly xml files, but also binary files.

fortran-fpm 0.13.0
Dependencies: gfortran@14.3.0
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://fpm.fortran-lang.org
Licenses: Expat
Build system: copy
Synopsis: Fortran Package Manager
Description:

Fortran Package Manager (fpm) is a package manager and build system for Fortran. Its key goal is to improve the user experience of Fortran programmers. It does so by making it easier to build your Fortran program or library, run the executables, tests, and examples, and distribute it as a dependency to other Fortran projects. Fpm's user interface is modeled after Rust's Cargo, so if you're familiar with that tool, you will feel at home with fpm. Fpm's long term vision is to nurture and grow the ecosystem of modern Fortran applications and libraries.

fypp 3.2
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://github.com/aradi/fypp
Licenses: FreeBSD
Build system: pyproject
Synopsis: Python powered Fortran preprocessor
Description:

Fypp is a Python powered preprocessor. It can be used for any programming languages but its primary aim is to offer a Fortran preprocessor, which helps to extend Fortran with condititional compiling and template metaprogramming capabilities. Instead of introducing its own expression syntax, it uses Python expressions in its preprocessor directives, offering the consistency and versatility of Python when formulating metaprogramming tasks.

device-xlib 0.8.6
Dependencies: openblas@0.3.30
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://gitlab.com/max-centre/components/devicexlib
Licenses: GPL 3+
Build system: gnu
Synopsis: Fortran library wrapping device-oriented routines and utilities
Description:

deviceXlib is a library that wraps device-oriented routines and utilities, such as device data allocation, host-device data transfers. It supports CUDA language, together with OpenACC and OpenMP programming paradigms. It wraps a subset of functions from Nvidia cuBLAS, Intel oneMKL BLAS and AMD rocBLAS libraries.

device-xlib 0.2.0-1.08558f7
Dependencies: openblas@0.3.30 lapack@3.12.1
Channel: guix-science
Location: guix-science/packages/fortran.scm (guix-science packages fortran)
Home page: https://gitlab.com/max-centre/components/devicexlib
Licenses: GPL 3+
Build system: gnu
Synopsis: Fortran library wrapping device-oriented routines and utilities
Description:

deviceXlib is a library that wraps device-oriented routines and utilities, such as device data allocation, host-device data transfers. It supports CUDA language, together with OpenACC and OpenMP programming paradigms. It wraps a subset of functions from Nvidia cuBLAS, Intel oneMKL BLAS and AMD rocBLAS libraries.

python-loopstructural 1.6.26
Propagated dependencies: python-numpy@2.3.1 python-pandas@2.3.3 python-scikit-image@0.26.0 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://loop3d.org/LoopStructural/
Licenses: Expat
Build system: pyproject
Synopsis: 3D geological modelling in Python
Description:

LoopStructural is an opensource Python library for 3D geological modelling. It can:

  • Model fault networks integrating fault kinematics and overprinting relationships;

  • Model folds using structural elements (fold axis, fold axial surface) for multiple fold events;

  • Use different implicit interpolation algorithms (Finite Difference, Piecewiese Linear, RBF);

  • Export models to vtk, geoh5, omf, gocad, csv, obj formats;

  • Visualise models in an interactive python environment.

netcdf-fortran-parallel 4.5.3
Dependencies: openmpi@4.1.6 libaec@1.0.6 hdf5-parallel-openmpi@1.14.6 netcdf-parallel-openmpi@4.9.2
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://www.unidata.ucar.edu/software/netcdf/
Licenses: X11-style
Build system: gnu
Synopsis: Fortran interface for the netCDF library with MPI support
Description:

NetCDF is an interface for scientific data access and a software library that provides an implementation of the interface. The netCDF library defines a machine-independent format for representing scientific data. Together, the interface, library, and format support the creation, access, and sharing of scientific data.

mpas-atmosphere 8.4.0
Dependencies: openmpi@4.1.6 netcdf-parallel-openmpi@4.9.2 netcdf-fortran-parallel@4.5.3 pnetcdf-fortran@1.13.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://mpas-dev.github.io
Licenses: Modified BSD
Build system: cmake
Synopsis: MPAS-Atmosphere is a non-hydrostatic atmosphere model
Description:

The Model for Prediction Across Scales - Atmosphere (MPAS-A) is a n-hydrostatic atmosphere model that is part of a family of Earth-system mponent models collectively known as MPAS. All MPAS models have in common eir use of centroidal Voronoi tessellations for their horizontal meshes, ich has motivated the development of a common software framework that ovides a high-level driver program and infrastructure for providing rallel execution, input and output, and other software infrastructure.

python-odc-geo 0.5.0
Propagated dependencies: python-affine@2.4.0 python-cachetools@6.1.0 python-dask@2025.11.0 python-numpy@2.3.1 python-pyproj@3.6.1 python-rasterio@1.3.7 python-shapely@2.1.1 python-xarray@2025.12.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://odc-geo.readthedocs.io/
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Geometry classes and operations in Python
Description:

This package provides powerful tools for geospatial data manipulation in Python, including working with coordinate reference systems, grid definitions, and spatial transformations.

python-xgcm 0.9.0
Propagated dependencies: python-dask@2025.11.0 python-future@1.0.0 python-numpy@2.3.1 python-xarray@2025.12.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: http://xgcm.readthedocs.org/
Licenses: Expat
Build system: pyproject
Synopsis: General Circulation Model Postprocessing with xarray
Description:

xgcm is a Python package for working with the datasets produced by numerical General Circulation Models (GCMs) and similar gridded datasets that are amenable to finite volume analysis. In these datasets, different variables are located at different positions with respect to a volume or area element (e.g. cell center, cell face, etc.) xgcm solves the problem of how to interpolate and difference these variables from one position to another.

python-geoana 0.8.1
Propagated dependencies: python-libdlf@0.3.0 python-numpy@2.3.1 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://geoana.simpeg.xyz/
Licenses: Expat
Build system: pyproject
Synopsis: Analytic expressions for geophysical responses
Description:

This package provides a collection of (mostly) analytic functions in geophysics. We take an object oriented approach with the aim of having users be able to readily interact with the functions using Jupyter.

python-pysolid 0.3.4
Propagated dependencies: python-matplotlib@3.10.8 python-numpy@2.3.1 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://github.com/insarlab/PySolid
Licenses: GPL 3+
Build system: pyproject
Synopsis: Compute solid Earth tides in Python
Description:

This package provides a Python wrapper for solid to compute solid Earth tides.

python-pyaps3 0.3.7
Propagated dependencies: python-cdsapi@0.7.7 python-matplotlib@3.10.8 python-numpy@2.3.1 python-pygrib@2.1.8 python-scipy@1.16.3 python-urllib3@2.5.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://github.com/insarlab/PyAPS
Licenses: GPL 3+
Build system: pyproject
Synopsis: Atmospheric Phase Screen estimation in Python
Description:

This package estimates differential phase delay maps due to the stratified atmosphere for correcting radar interferograms.

python-choclo 0.3.2
Propagated dependencies: python-numba@0.62.1 python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://www.fatiando.org/choclo/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Kernel functions for your geophysical models
Description:

Choclo is a Python library that hosts optimized kernel functions for running geophysical forward and inverse models, intended to be used by other libraries as the underlying layer of their computation.

python-ecmwf-datastores-client 0.4.2
Propagated dependencies: python-attrs@25.3.0 python-multiurl@0.3.7 python-requests@2.32.5 python-typing-extensions@4.15.0
Channel: guix-science
Location: guix-science/packages/geoscience.scm (guix-science packages geoscience)
Home page: https://ecmwf.github.io/ecmwf-datastores-client/
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Python client for the ECMWF Data Stores Service
Description:

This package provides programmatic access to the CDS, ADS and EWDS data catalogues from the ECMWF.

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