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Tool within FSL for identifying and analyzing clusters in neuroimaging data, particularly useful for statistical thresholding and inference.
A wrapper that encapsulates the CEPHES Cmath library.
Module within FSL that provides advanced functionalities for noise reduction in MRI data using nonlinear filtering techniques.
A library that implement miscellaneous mathematicals methods.
It is a set of useful command-line utilities which allow the conversion, processing etc.of Analyze/AVW and Nifti format data sets
This library is likely a component of FSL dedicated to the analysis and visualization of cortical surface data in neuroimaging studies.
Warpfns is a set of functions within the FSL (FMRIB Software Library) used for handling and applying spatial transformations (warps) to MRI images.
FLIRT (FMRIB's Linear Image Registration Tool) is a fully automated robust and accurate tool for linear (affine) intra- and inter-modal brain image registration.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
FNIRT (FMRIB's Non-linear Image Registration Tool) is a tool for non-linear registration of brain images, used to align images from different subjects or modalities.
The meshclass module in FSL provides the Mesh class for representing and manipulating 3D models made of triangles, supporting various geometric operations and querie
A library that returns the object representing an image/volume once it has been deserialized by the newnifti library. The library implements a data container and common operations for nifti images/volumes
Basisfield is a tool within the FSL (FMRIB Software Library) used to model and correct B0 field inhomogeneities in MRI images, which can cause geometric distortions. It is essential for improving image quality and precision in both clinical and research applications.
Verbena is a Bayesian Inference tool for quantification of perfusion and other haemodynamic parameters from Dynamic Susceptibility Contrast perfusion MRI of the brain.
A newmat-like wrapper around the Armadillo linear algebra library.
The bet2 module in FSL is a brain extraction tool that removes non-brain tissue from MRI images, aiding in isolating the brain for further analysis.
Topup is a tool within FSL that corrects for susceptibility-induced distortions in echo planar imaging (EPI) data.
Library or collection of resources supporting FIRST, FSL's tool for automated segmentation of subcortical brain structures, enhancing its functionality and accuracy.
Tool within FSL for FMRIB's Local Analysis of Mixed Effects, used for higher-level analysis of fMRI data, providing robust statistical modeling.
FAST4 is an automated segmentation tool in FSL that segments brain images into different tissue types and corrects for bias field inhomogeneities.
This package is a build dependency of all FSL modules.
Eddy is a tool within FSL that corrects for eddy current distortions and head movements in diffusion MRI data.
cudabasisfield is a FSL module providing helper functions for CUDA operations, facilitating GPU acceleration in FSL tools.
A library that encapsulates the reference implementation of the NIfTI format as well as the legacy code necessary to perform I/O operations on NIfTI files.