This package provides functions for printing the contents of a folder as columns in a ragged-bottom data.frame and for viewing the details (size, time created, time modified, etc.) of a folder's top level contents.
This package provides a population genetic simulator, which is able to generate synthetic datasets for single-nucleotide polymorphisms (SNP) for multiple populations. The genetic distances among populations can be set according to the Fixation Index (Fst) as explained in Balding and Nichols (1995) <doi:10.1007/BF01441146>. This tool is able to simulate outlying individuals and missing SNPs can be specified. For Genome-wide association study (GWAS), disease status can be set in desired level according risk ratio.
This package provides a wrapper for the Filebin API. Filebin implements convenient file sharing on the web.
Stores large arrays in files to avoid occupying large memories. Implemented with super fast gigabyte-level multi-threaded reading/writing via OpenMP
'. Supports multiple non-character data types (double, float, complex, integer, logical, and raw).
Transform output files of some tools to the microtable object of microtable class in microeco package. The microtable class is the basic class in microeco package and is necessary for the downstream microbial community data analysis.
Create descriptive file names with ease. New file names are automatically (but optionally) time stamped and placed in date stamped directories. Streamline your analysis pipeline with input and output file names that have informative tags and proper file extensions.
FileSaver.js
implements the saveAs()
FileSaver interface in browsers that do not natively support it.
FileSaver.js
is the solution to saving files on the client-side, and is perfect for webapps that need to generate files, or for saving sensitive information that shouldn't be sent to an external server.
The main functions in this package are with_cache()
and cached_read()
. The former is a simple way to cache an R object into a file on disk, using cachem'. The latter is a wrapper around any standard read function, but caches both the output and the file list info. If the input file list info hasn't changed, the cache is used; otherwise, the original files are re-read. This can save time if the original operation requires reading from many files, and/or involves lots of processing.
Documentation at https://melpa.org/#/filelock
Documentation at https://melpa.org/#/filetree
Documentation at https://melpa.org/#/filetags
This package provides Library for writing tests for utilities that read text files and produce text output.
Documentation at https://melpa.org/#/file-info
Simple scheme to classify file types in a hierarchical fashion.
Match filepath is validated, or exclude filepath that don't need.
Package for quick view and copy all necessary information about current opened file.
Strengthen the ability of file system
Simple key-value database using SQLite as the backend.
Cross-platform file path manipulation.
Documentation at https://melpa.org/#/kaesar-file
Save common bioinformatics file formats within the alabaster framework. This includes BAM, BED, VCF, bigWig
, bigBed
, FASTQ, FASTA and so on. We save and load additional metadata for each file, and we support linkage between each file and its corresponding index.
Documentation at https://melpa.org/#/find-file-rg
This package provides the Proc::PID::File
Perl module. It is useful for writers of daemons and other processes that need to tell whether they are already running, in order to prevent multiple process instances. The module accomplishes this via *nix-style pidfiles, which are files that store a process identifier.