_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
r-bsgenome 1.74.0
Propagated dependencies: r-biocgenerics@0.52.0 r-biocio@1.16.0 r-biostrings@2.74.0 r-genomeinfodb@1.42.0 r-genomicranges@1.58.0 r-iranges@2.40.0 r-matrixstats@1.4.1 r-rsamtools@2.22.0 r-rtracklayer@1.66.0 r-s4vectors@0.44.0 r-xvector@0.46.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/BSgenome
Licenses: Artistic License 2.0
Synopsis: Infrastructure for Biostrings-based genome data packages
Description:

This package provides infrastructure shared by all Biostrings-based genome data packages and support for efficient SNP representation.

r-bsgenomeforge 1.6.0
Propagated dependencies: r-s4vectors@0.44.0 r-rtracklayer@1.66.0 r-iranges@2.40.0 r-genomicranges@1.58.0 r-genomeinfodb@1.42.0 r-bsgenome@1.74.0 r-biostrings@2.74.0 r-biocio@1.16.0 r-biocgenerics@0.52.0 r-biobase@2.66.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenomeForge
Licenses: Artistic License 2.0
Synopsis: Forge your own BSgenome data package
Description:

This package provides a set of tools to forge BSgenome data packages. Supersedes the old seed-based tools from the BSgenome software package. This package allows the user to create a BSgenome data package in one function call, simplifying the old seed-based process.

r-bsgenome-alyrata-jgi-v1 1.0.1
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1
Licenses: Artistic License 2.0
Synopsis: Arabidopsis lyrata full genome (JGI version V1.0)
Description:

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

r-bsgenome-gmax-ncbi-gmv40 4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Gmax.NCBI.Gmv40
Licenses: FSDG-compatible
Synopsis: Full genome sequences for Glycine max (Gmv40)
Description:

Full genome sequences for Glycine max as provided by NCBI (assembly Glycine_max_v4.0, assembly accession GCF_000004515.5) and stored in Biostrings objects.

r-bsgenome-osativa-msu-msu7 0.99.2
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Osativa.MSU.MSU7
Licenses: Artistic License 2.0
Synopsis: Oryza sativa full genome (MSU7)
Description:

Oryza sativa full genome as provided by MSU (MSU7 Genome Release) and stored in Biostrings objects.

r-bsgenome-celegans-ucsc-ce2 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Celegans.UCSC.ce2
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Caenorhabditis elegans (UCSC version ce2)
Description:

Full genome sequences for Caenorhabditis elegans (Worm) as provided by UCSC (ce2, Mar. 2004) and stored in Biostrings objects.

r-bsgenome-celegans-ucsc-ce6 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Celegans.UCSC.ce6/
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Worm
Description:

This package provides full genome sequences for Caenorhabditis elegans (Worm) as provided by UCSC (ce6, May 2008) and stored in Biostrings objects.

r-bsgenome-hsapiens-ucsc-hs1 1.4.4
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hs1
Licenses: Artistic License 2.0
Synopsis: Full genomic sequences for UCSC genome hs1 (Homo sapiens)
Description:

Full genomic sequences for UCSC genome hs1 (the hs1 genome is based on assembly T2T-CHM13v2.0, with GenBank assembly accession GCA_009914755.4). The sequences are stored in DNAString objects.

r-bsgenome-tgondii-toxodb-7-0 0.99.1
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Tgondii.ToxoDB.7.0
Licenses: FSDG-compatible
Synopsis: Toxoplasma gondii ME49 (ToxoDB-7.0)
Description:

Toxoplasma gondii ME49 genome Release 7.0 available at http://www.toxodb.org.

r-bsgenome-mmusculus-ucsc-mm8 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm8
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Mus musculus (UCSC version mm8)
Description:

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm8, Feb. 2006) and stored in Biostrings objects.

r-bsgenome-hsapiens-ucsc-hg17 1.3.1001
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg17
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Homo sapiens (UCSC version hg17)
Description:

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg17, May 2004) and stored in Biostrings objects.

r-bsgenome-carietinum-ncbi-v1 1.0.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Carietinum.NCBI.v1
Licenses: GPL 3
Synopsis: Cicer arietinum (Chickpea) full genome (NCBI version ASM33114v1)
Description:

Full genome sequences for Cicer arietinum (Chickpea) as provided by NCBI (ASM33114v1, Jan. 2013) and stored in Biostrings objects.

r-bsgenome-hsapiens-ucsc-hg18 1.3.1000
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg18
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Homo sapiens (UCSC version hg18)
Description:

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects.

r-bsgenome-celegans-ucsc-ce11 1.4.2
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Celegans.UCSC.ce11
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Caenorhabditis elegans (UCSC version ce11)
Description:

Full genome sequences for Caenorhabditis elegans (Worm) as provided by UCSC (ce11, Feb. 2013) and stored in Biostrings objects.

r-bsgenome-mfuro-ucsc-musfur1 1.4.1
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Mfuro.UCSC.musFur1
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Mustela putorius furo (UCSC version musFur1)
Description:

Full genome sequences for Mustela putorius furo (Ferret) as provided by UCSC (musFur1, Apr. 2011) and stored in Biostrings objects.

r-bsgenome-hsapiens-ucsc-hg19 1.4.3
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg19/
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Homo sapiens
Description:

This package provides full genome sequences for Homo sapiens as provided by UCSC (hg19, February 2009) and stored in Biostrings objects.

r-bsgenome-mmusculus-ucsc-mm9 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm9/
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Mouse
Description:

This package provides full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, July 2007) and stored in Biostrings objects.

r-bsgenome-hsapiens-ucsc-hg38 1.4.5
Propagated dependencies: r-bsgenome@1.74.0 r-genomeinfodb@1.42.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Hsapiens.UCSC.hg38/
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Homo sapiens
Description:

This package provides full genome sequences for Homo sapiens (Human) as provided by UCSC (hg38, Dec. 2013) and stored in Biostrings objects.

r-bsgenome-celegans-ucsc-ce10 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Celegans.UCSC.ce10/
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Worm
Description:

This package provides full genome sequences for Caenorhabditis elegans (Worm) as provided by UCSC (ce10, Oct 2010) and stored in Biostrings objects.

r-bsgenome-drerio-ucsc-danrer5 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer5
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Danio rerio (UCSC version danRer5)
Description:

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer5, Jul. 2007) and stored in Biostrings objects.

r-bsgenome-drerio-ucsc-danrer6 1.4.0
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer6
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Danio rerio (UCSC version danRer6)
Description:

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer6, Dec. 2008) and stored in Biostrings objects.

r-bsgenome-mmusculus-ucsc-mm39 1.4.3
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm39
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Mus musculus (UCSC genome mm39, based on GRCm39)
Description:

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (genome mm39, based on assembly GRCm39) and stored in Biostrings objects.

r-bsgenome-mmusculus-ucsc-mm10 1.4.3
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm10/
Licenses: Artistic License 2.0
Synopsis: Full genome sequences for Mouse
Description:

This package provides full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm10, December 2011) and stored in Biostrings objects.

r-bsgenome-ecoli-ncbi-20080805 1.3.1000
Propagated dependencies: r-bsgenome@1.74.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/BSgenome.Ecoli.NCBI.20080805
Licenses: Artistic License 2.0
Synopsis: Escherichia coli full genomes
Description:

This package provides Escherichia coli full genomes for several strains as provided by NCBI on 2008/08/05 and stored in Biostrings objects.

Page: 12345
Total results: 114