Import and export data from the most common statistical formats by using R functions that guarantee the least loss of the data information, giving special attention to the date variables and the labelled ones.
Jointly estimates two-group means and covariances for matrix-variate data and calculates test statistics. This package implements the algorithms defined in Hornstein, Fan, Shedden, and Zhou (2018) <doi:10.1080/01621459.2018.1429275>.
Computes densities, probabilities, and random deviates of the Matrix Normal (Pocuca et al. (2019) <doi:10.48550/arXiv.1910.02859>). Also includes simple but useful matrix functions. See the vignette for more information.
This package provides a collection of functions to construct sets of orthogonal polynomials and their recurrence relations. Additional functions are provided to calculate the derivative, integral, value and roots of lists of polynomial objects.
To automated functional annotation of genetic variants and linked proxies. Linked SNPs in moderate to high linkage disequilibrium (e.g. r2>0.50) with the corresponding index SNPs will be selected for further analysis.
Set of tools to manipulate the JDemetra+ workspaces. Based on the RJDemetra package (which interfaces with version 2 of the JDemetra+ (<https://github.com/jdemetra/jdemetra-app>), the seasonal adjustment software officially recommended to the members of the European Statistical System (ESS) and the European System of Central Banks). This package provides access to additional workspace manipulation functions such as metadata manipulation, raw paths and wrangling of several workspaces simultaneously. These additional functionalities are useful as part of a CVS data production chain.
Defines the underlying pipeline structure for reproducible neuroscience, adopted by RAVE (reproducible analysis and visualization of intracranial electroencephalography); provides high-level class definition to build, compile, set, execute, and share analysis pipelines. Both R and Python are supported, with Markdown and shiny dashboard templates for extending and building customized pipelines. See the full documentations at <https://rave.wiki>; to cite us, check out our paper by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>), or run citation("ravepipeline") for details.
This package has been developed under ROpenSci gudelines to integrate conventional and cutting edge cytometry analysis tools under a unified framework. It aims to represent an intuitive and interactive approach to analysing cytometry data in R.
This package provides an Emacs major mode rec-mode for working with GNU Recutils text-based, human-editable databases. It supports editing, navigation, and querying of recutils database files including field and record folding.
The iterative Bayesian Model Averaging (BMA) algorithm is a variable selection and classification algorithm with an application of classifying 2-class microarray samples, as described in Yeung, Bumgarner and Raftery (Bioinformatics 2005, 21: 2394-2402).
This package performs Bayesian prediction of complex computer codes when fast approximations are available. It uses a hierarchical version of the Gaussian process, originally proposed by Kennedy and O'Hagan (2000), Biometrika 87(1):1.
This package provides functions to compute upper Clopper-Pearson confidence limits of early life failure probabilities and required sample sizes of burn-in studies under further available information, e.g. from other products or technologies.
This package provides a daily summary of the Coronavirus (COVID-19) cases in Italy by country, region and province level. Data source: Presidenza del Consiglio dei Ministri - Dipartimento della Protezione Civile <https://www.protezionecivile.it/>.
R wrappers of C++ implementation of Faster K-Medoids clustering algorithms (FastPAM, FastCLARA and FastCLARANS) proposed in Erich Schubert, Peter J. Rousseeuw 2019 <doi:10.1007/978-3-030-32047-8_16>.
Fast and numerically stable estimation of a covariance matrix by banding the Cholesky factor using a modified Gram-Schmidt algorithm implemented in RcppArmadilo. See <http://stat.umn.edu/~molst029> for details on the algorithm.
An RStudio addin for teaching and learning making plot using the ggplot2 package. You can learn each steps of making plot by clicking your mouse without coding. You can get resultant code for the plot.
We construct the explicit form of clamped cubic interpolating spline (both uniform - knots are equidistant and non-uniform - knots are arbitrary). Using this form, we propose a linear regression model suitable for real data smoothing.
Wrapper for Kobotoolbox APIs ver 2 mentioned at <https://support.kobotoolbox.org/api.html>, to download data from Kobotoolbox to R. Small and simple package that adds immense convenience for the data professionals using Kobotoolbox'.
An interactive application to visualise meta-analysis data as a physical weighing machine. The interface is based on the Shiny web application framework, though can be run locally and with the user's own data.
Updating the now 10-year-old nycflights13 data package. It contains information about all flights that departed from the three main New York City airports in 2023 and metadata on airlines, airports, weather, and planes.
Tests the observed overlapping polygon area in a collection of polygons against a null model of random rotation, as explained in De la Cruz et al. (2017) <doi:10.13140/RG.2.2.12825.72801>.
Computes confidence regions on the location of response surface optima. Response surface models can be up to cubic polynomial models in up to 5 controllable factors, or Thin Plate Spline models in 2 controllable factors.
Interactively annotate base R graphics plots with freehand drawing, symbols (points, lines, arrows, rectangles, circles, ellipses), and text. This is useful for teaching, for example to visually explain certain plot elements, and creating quick sketches.
This package provides a Rstudio addin to download, merge and upload Rstudio settings and keymaps, essentially syncing them at will. It uses Google Drive as a cloud storage to keep the settings and keymaps files.