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texlive-revtex 2025.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/revtex
Licenses: LPPL 1.3c
Build system: texlive
Synopsis: Styles for various Physics Journals
Description:

This package includes styles for American Physical Society, American Institute of Physics, and Optical Society of America. The distribution consists of the RevTeX class itself, and several support packages.

r-compepitools 1.44.0
Propagated dependencies: r-xvector@0.50.0 r-topgo@2.62.0 r-seqinfo@1.0.0 r-s4vectors@0.48.0 r-rsamtools@2.26.0 r-methylpipe@1.44.0 r-iranges@2.44.0 r-gplots@3.2.0 r-go-db@3.22.0 r-genomicranges@1.62.0 r-genomicfeatures@1.62.0 r-biostrings@2.78.0 r-biocgenerics@0.56.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/compEpiTools
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Tools for computational epigenomics
Description:

This package provides tools for computational epigenomics developed for the analysis, integration and simultaneous visualization of various (epi)genomics data types across multiple genomic regions in multiple samples.

r-dominoeffect 1.30.0
Propagated dependencies: r-variantannotation@1.56.0 r-summarizedexperiment@1.40.0 r-seqinfo@1.0.0 r-pwalign@1.6.0 r-iranges@2.44.0 r-genomicranges@1.62.0 r-data-table@1.17.8 r-biostrings@2.78.0 r-biomart@2.66.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/d.scm (guix-bioc packages d)
Home page: https://bioconductor.org/packages/DominoEffect
Licenses: GPL 3+
Build system: r
Synopsis: Identification and Annotation of Protein Hotspot Residues
Description:

The functions support identification and annotation of hotspot residues in proteins. These are individual amino acids that accumulate mutations at a much higher rate than their surrounding regions.

r-canadianmaps 2.0.0
Propagated dependencies: r-sp@2.2-0 r-sf@1.0-23 r-rcolorbrewer@1.1-3 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/joellecayen/canadianmaps
Licenses: Expat
Build system: r
Synopsis: Effortlessly Create Stunning Canadian Maps
Description:

Simple and seamless access to a variety of StatCan shapefiles for mapping Canadian provinces, regions, forward sortation areas, census divisions, and subdivisions using the popular ggplot2 package.

r-cryptography 1.0.0
Propagated dependencies: r-desctools@0.99.60
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/PiarasFahey/cryptography
Licenses: Expat
Build system: r
Synopsis: Encrypts and Decrypts Text Ciphers
Description:

Playfair, Four-Square, Scytale, Columnar Transposition and Autokey methods. Further explanation on methods of classical cryptography can be found at Wikipedia; (<https://en.wikipedia.org/wiki/Classical_cipher>).

r-dovalidation 1.1.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DOvalidation
Licenses: GPL 2
Build system: r
Synopsis: Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation
Description:

Local linear hazard estimator and its multiplicatively bias correction, including three bandwidth selection methods: best one-sided cross-validation, double one-sided cross-validation, and standard cross-validation.

r-dynbiplotgui 1.1.6
Dependencies: make@4.4.1
Propagated dependencies: r-tcltk2@1.6.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dynBiplotGUI
Licenses: GPL 2+
Build system: r
Synopsis: Full Interactive GUI for Dynamic Biplot in R
Description:

This package provides a GUI to solve dynamic biplots and classical biplot. Try matrices of 2-way and 3-way. The GUI can be run in multiple languages.

r-gomogomonomi 0.1.0
Propagated dependencies: r-htmltools@0.5.8.1 r-glue@1.8.0
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/feddelegrand7/GomoGomonoMi
Licenses: Expat
Build system: r
Synopsis: Animate Text using the 'Animate.css' Library
Description:

Allows the user to animate text within rmarkdown documents and shiny applications. The animations are activated using the Animate.css library. See <https://animate.style/> for more information.

r-gamlss-lasso 1.0-1
Propagated dependencies: r-matrix@1.7-4 r-lars@1.3 r-glmnet@4.1-10 r-gamlss@5.5-0
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://www.gamlss.com/
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Extra Lasso-Type Additive Terms for GAMLSS
Description:

Interface for extra high-dimensional smooth functions for Generalized Additive Models for Location Scale and Shape (GAMLSS) including (adaptive) lasso, ridge, elastic net and least angle regression.

r-lavaan-shiny 1.2
Propagated dependencies: r-shinyace@0.4.4 r-shiny@1.11.1 r-semplot@1.1.7 r-psych@2.5.6 r-lavaan@0.6-20
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://github.com/kylehamilton/lavaan.shiny
Licenses: GPL 3
Build system: r
Synopsis: Latent Variable Analysis with Shiny
Description:

Interactive shiny application for working with different kinds of latent variable analysis, with the lavaan package. Graphical output for models are provided and different estimators are supported.

r-labelmachine 1.0.0
Propagated dependencies: r-yaml@2.3.10
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://a-maldet.github.io/labelmachine
Licenses: GPL 3
Build system: r
Synopsis: Make Labeling of R Data Sets Easy
Description:

Assign meaningful labels to data frame columns. labelmachine manages your label assignment rules in yaml files and makes it easy to use the same labels in multiple projects.

r-pxwebapidata 1.9.0
Propagated dependencies: r-rjstat@0.4.3 r-pxweb@0.17.0 r-jsonlite@2.0.0 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://statisticsnorway.github.io/ssb-pxwebapidata/
Licenses: Expat
Build system: r
Synopsis: PX-Web Data by API
Description:

Function to read PX-Web data into R via API. The example code reads data from the three national statistical institutes, Statistics Norway, Statistics Sweden and Statistics Finland.

r-quantilenpci 0.9.0
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://cran.r-project.org/package=QuantileNPCI
Licenses: GPL 3
Build system: r
Synopsis: Nonparametric Confidence Intervals for Quantiles
Description:

Based on Alan D. Hutson (1999) <doi:10.1080/02664769922458>, "Calculating nonparametric confidence intervals for quantiles using fractional order statistics", Journal of Applied Statistics, 26:3, 343-353.

r-rcppziggurat 0.1.8
Propagated dependencies: r-rcpp@1.1.0 r-rcppgsl@0.3.13
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/RcppZiggurat/
Licenses: GPL 2+
Build system: r
Synopsis: Rcpp integration of different "Ziggurat" normal RNG implementations
Description:

The Ziggurat generator for normally distributed random numbers, originally proposed by Marsaglia and Tsang (2000, https://doi.org/10.18637/jss.v005.i08) has been improved upon a few times starting with Leong et al (2005, https://doi.org/10.18637/jss.v012.i07). This package provides an aggregation for comparing different implementations in order to provide a 'faster but good enough' alternative for use with R and C++ code.

r-rpatternjoin 1.0.0
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RPatternJoin
Licenses: Expat
Build system: r
Synopsis: String Similarity Joins for Hamming and Levenshtein Distances
Description:

This project is a tool for words edit similarity joins (a.k.a. all-pairs similarity search) under small (< 3) edit distance constraints. It works for Levenshtein/Hamming distances and words from any alphabet. The software was originally developed for joining amino-acid/nucleotide sequences from Adaptive Immune Repertoires, where the number of words is relatively large (10^5-10^6) and the average length of words is relatively small (10-100).

python-raccoon 1.0.0
Propagated dependencies: python-astropy@7.1.1 python-matplotlib@3.8.2 python-numpy@1.26.4 python-scipy@1.12.0 python-statsmodels@0.14.4 python-tqdm@4.67.1
Channel: guix
Location: gnu/packages/astronomy.scm (gnu packages astronomy)
Home page: https://github.com/ajshajib/raccoon
Licenses: Modified BSD
Build system: pyproject
Synopsis: Clean modulation due to resampling noise in the JWST/NIRSpec IFS spectra
Description:

Package Raccoon cleans the "wiggles" (i.e., low-frequency sinusoidal artifacts) in the JWST-NIRSpec IFS (integral field spectroscopy) data. These wiggles are caused by resampling noise or aliasing artifacts.

sbcl-cl-random 0.0.1-1.5bb6591
Dependencies: sbcl-alexandria@1.4-0.009b7e5 sbcl-anaphora@0.9.8 sbcl-array-operations@0.0.0-0.75cbc3b sbcl-cl-rmath@0.0.1-1.f6add1e sbcl-cl-slice@0.1.0-1.c531683 sbcl-gsll@0.0.0-1.1a8ada2 sbcl-let-plus@0.0.0-2.455e657 sbcl-lla@0.4.0-2.4008d36 sbcl-numerical-utilities@1.2.0-0.44f45ba
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/tpapp/cl-random
Licenses: Expat
Build system: asdf/sbcl
Synopsis: Random variates for Common Lisp
Description:

cl-random is a library for generating random draws from various commonly used distributions, and for calculating statistical functions, such as density, distribution and quantiles for these distributions.

python-reretry 0.11.8
Channel: guix
Location: gnu/packages/python-xyz.scm (gnu packages python-xyz)
Home page: https://github.com/leshchenko1979/reretry
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Functional decorator for retrying on exceptions
Description:

This package is a fork from the retry package, but with some of added community-sourced features. It provides an easy to use, but functional decorator for retrying on exceptions.

r-biodosetools 3.7.2
Propagated dependencies: r-tidyr@1.3.1 r-shinywidgets@0.9.0 r-shinydashboard@0.7.3 r-shiny@1.11.1 r-rmarkdown@2.30 r-rlang@1.1.6 r-rhandsontable@0.3.8 r-readr@2.1.6 r-pdftools@3.6.0 r-openxlsx@4.2.8.1 r-msm@1.8.2 r-mixtools@2.0.0.1 r-maxlik@1.5-2.1 r-mass@7.3-65 r-magrittr@2.0.4 r-gridextra@2.3 r-golem@0.5.1 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-config@0.3.2 r-cli@3.6.5 r-bsplus@0.1.5
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://biodosetools-team.github.io/biodosetools/
Licenses: GPL 3
Build system: r
Synopsis: 'shiny' Application for Biological Dosimetry
Description:

This package provides a tool to perform all different statistical tests and calculations needed by Biological dosimetry Laboratories. Detailed documentation is available in <https://biodosetools-team.github.io/documentation/>.

r-bimodalindex 1.1.11
Propagated dependencies: r-oompabase@3.2.10 r-mclust@6.1.2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: http://oompa.r-forge.r-project.org/
Licenses: ASL 2.0
Build system: r
Synopsis: The Bimodality Index
Description:

Defines the functions used to compute the bimodal index as defined by Wang et al. (2009) <https://pmc.ncbi.nlm.nih.gov/articles/PMC2730180/>, <doi:10.4137/CIN.S2846>.

r-geomtextpath 0.2.0
Propagated dependencies: r-vctrs@0.6.5 r-textshaping@1.0.4 r-systemfonts@1.3.1 r-scales@1.4.0 r-rlang@1.1.6 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://allancameron.github.io/geomtextpath/
Licenses: Expat
Build system: r
Synopsis: Curved Text in 'ggplot2'
Description:

This package provides a ggplot2 extension that allows text to follow curved paths. Curved text makes it easier to directly label paths or neatly annotate in polar co-ordinates.

r-glarmavarsel 1.0
Propagated dependencies: r-matrix@1.7-4 r-glmnet@4.1-10 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=GlarmaVarSel
Licenses: GPL 2
Build system: r
Synopsis: Variable Selection in Sparse GLARMA Models
Description:

This package performs variable selection in high-dimensional sparse GLARMA models. For further details we refer the reader to the paper Gomtsyan et al. (2020), <arXiv:2007.08623v1>.

r-itol-toolkit 1.1.12
Propagated dependencies: r-wesanderson@0.3.7 r-tidyr@1.3.1 r-stringr@1.6.0 r-stringdist@0.9.15 r-shiny@1.11.1 r-seqinr@4.2-36 r-rstudioapi@0.17.1 r-rcolorbrewer@1.1-3 r-purrr@1.2.0 r-miniui@0.1.2 r-magrittr@2.0.4 r-ggsci@4.1.0 r-dplyr@1.1.4 r-data-table@1.17.8 r-colourpicker@1.3.0 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://tongzhou2017.github.io/itol.toolkit/
Licenses: Expat
Build system: r
Synopsis: Helper Functions for 'Interactive Tree Of Life'
Description:

The Interactive Tree Of Life <https://itol.embl.de/> online server can edit and annotate trees interactively. The itol.toolkit package can support all types of annotation templates.

r-lepidochroma 0.1.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lepidochroma
Licenses: GPL 3+
Build system: r
Synopsis: Colour Palettes Inspired by Butterflies
Description:

This package provides a collection of colour palettes inspired by some of our dearest butterfly species. This package provides continuous and categorical palettes, including some colour blind friendly options.

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