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Person-specific and within-person network estimation from intensive longitudinal and panel data. Estimators include ordinary vector autoregression (VAR), graphical vector autoregression (graphical VAR), multilevel vector autoregression (mlVAR), rolling ordinary and graphical VAR, native Bayesian VAR and multilevel Bayesian VAR, unified Structural Equation Modeling (uSEM), and Group Iterative Multiple Model Estimation (GIMME). All estimators are native clean-room implementations. All functions are validated against authoritative literature. Also provides preprocessing audits, edge-stability diagnostics, model-comparison reports, and rolling forecast validation. Methods are described in <doi:10.1007/978-3-031-95365-1_20> and <doi:10.1080/00273171.2018.1454823>.
This package provides tools to assess model fit and identify misfitting items for Rasch models (RM) and partial credit models (PCM). Included are item fit statistics, item characteristic curves, item-restscore association, conditional likelihood ratio tests, assessment of measurement error, estimates of the reliability and test targeting as described in Christensen et al. (Eds.) (2013, ISBN:978-1-84821-222-0).
The Integro-Difference Equation model is a linear, dynamical model used to model phenomena that evolve in space and in time; see, for example, Cressie and Wikle (2011, ISBN:978-0-471-69274-4) or Dewar et al. (2009) <doi:10.1109/TSP.2008.2005091>. At the heart of the model is the kernel, which dictates how the process evolves from one time point to the next. Both process and parameter reduction are used to facilitate computation, and spatially-varying kernels are allowed. Data used to estimate the parameters are assumed to be readings of the process corrupted by Gaussian measurement error. Parameters are fitted by maximum likelihood, and estimation is carried out using an evolution algorithm.
An interval-valued extension of ordinary and simple kriging. Optimization of the function is based on a generalized interval distance. This creates a non-differentiable cost function that requires a differentiable approximation to the absolute value function. This differentiable approximation is optimized using a Newton-Raphson algorithm with a penalty function to impose the constraints. Analyses in the package are driven by the intsp and intgrd classes, which are interval-valued extensions of SpatialPointsDataFrame and SpatialPixelsDataFrame respectively. The package includes several wrappers to functions in the gstat and sp packages.
This package provides a collection of useful functions and datasets for the Data Science Course at IBAW.
Estimation of joint models for multivariate longitudinal markers (with various distributions available) and survival outcomes (possibly accounting for competing risks) with Integrated Nested Laplace Approximations (INLA). The flexible and user friendly function joint() facilitates the use of the fast and reliable inference technique implemented in the INLA package for joint modeling. More details are given in the help page of the joint() function (accessible via ?joint in the R console) and the vignette associated to the joint() function (accessible via vignette("INLAjoint") in the R console).
This package provides native R access to Interactive Brokers Trader Workstation API.
Implement a multivariate analysis of the impact of items to identify a bias in the questionnaire validation of Likert-type scale variables. The items requires considering a null value (category doesn't have tendency). Offering frequency, importance and impact of the items.
Improve optical character recognition by binarizing images. The package focuses primarily on local adaptive thresholding algorithms. In English, this means that it has the ability to turn a color or gray scale image into a black and white image. This is particularly useful as a preprocessing step for optical character recognition or handwritten text recognition.
Comprehensive instrumental variables and GMM estimation with automatic diagnostics, inspired by the Stata command ivreg2 of Baum, Schaffer, and Stillman (2003) <doi:10.1177/1536867X0300300101> and Baum, Schaffer, and Stillman (2007) <doi:10.1177/1536867X0800700402>. Supports 2SLS, LIML, Fuller, k-class, two-step efficient GMM, and continuously-updated (CUE) estimators. Provides classical, robust, cluster-robust, HAC, and Driscoll-Kraay standard errors. Reports weak identification, underidentification, overidentification, and endogeneity tests at estimation time. All outputs are verified against Stata within tight numerical tolerances.
The development of ISM was made by Warfield in 1974. ISM is the process of collaborating distinct or related essentials into a simplified and an organized format. Hence, ISM is a methodology that seeks the interrelationships among the various elements considered and endows with a hierarchical and multilevel structure. To run this package user needs to provide a matrix (VAXO) converted into 0's and 1's. Warfield,J.N. (1974) <doi:10.1109/TSMC.1974.5408524> Warfield,J.N. (1974, E-ISSN:2168-2909).
This package implements the adaptive influence-based borrowing framework proposed by Qinwei Yang, Jingyi Li, Peng Wu, and Shu Yang (2026+) in the paper ``Improving Treatment Effect Estimation in Trials through Adaptive Borrowing of External Controls" <doi:10.48550/arXiv.2604.13973> for augmenting Randomized Controlled Trials (RCTs) with External Control (EC) data. This package provides a comprehensive workflow to: (1) quantify the comparability of external control samples using influence scores approximated via the influence function of the M-estimator; (2) construct candidate borrowing subsets and select the optimal subset that minimizes the Mean Squared Error (MSE); and (3) calibrate systematic differences in external outcomes using R-learner methods implemented via Ordinary Least Squares or Kernel Ridge Regression.
Query for enriched data such as country, region, city, latitude & longitude, ZIP code, time zone, Autonomous System, Internet Service Provider, domain, net speed, International direct dialing (IDD) code, area code, weather station data, mobile data, elevation, usage type, address type, advertisement category, fraud score, and proxy data with an IP address. You can also query a list of hosted domain names for the IP address too. This package uses the IP2Location.io API to query this data. To get started with a free API key, sign up here <https://www.ip2location.io/sign-up?ref=1>.
This package provides functions to perform robust nonparametric survival analysis with right censored data using a prior near-ignorant Dirichlet Process. Mangili, F., Benavoli, A., de Campos, C.P., Zaffalon, M. (2015) <doi:10.1002/bimj.201500062>.
Flexibly implements Integral Projection Models using a mathematical(ish) syntax. This package will not help with the vital rate modeling process, but will help convert those regression models into an IPM. ipmr handles density dependence and environmental stochasticity, with a couple of options for implementing the latter. In addition, provides functions to avoid unintentional eviction of individuals from models. Additionally, provides model diagnostic tools, plotting functionality, stochastic/deterministic simulations, and analysis tools. Integral projection models are described in depth by Easterling et al. (2000) <doi:10.1890/0012-9658(2000)081[0694:SSSAAN]2.0.CO;2>, Merow et al. (2013) <doi:10.1111/2041-210X.12146>, Rees et al. (2014) <doi:10.1111/1365-2656.12178>, and Metcalf et al. (2015) <doi:10.1111/2041-210X.12405>. Williams et al. (2012) <doi:10.1890/11-2147.1> discuss the problem of unintentional eviction.
This package provides functions to make inference about the standardized mortality ratio (SMR) when evaluating the effect of a screening program. The package is based on methods described in Sasieni (2003) <doi: 10.1097/00001648-200301000-00026> and Talbot et al. (2011) <doi: 10.1002/sim.4334>.
Implementations of the weighted Kozachenko-Leonenko entropy estimator and independence tests based on this estimator, (Kozachenko and Leonenko (1987) <http://mi.mathnet.ru/eng/ppi797>). Also includes a goodness-of-fit test for a linear model which is an independence test between covariates and errors.
An eclectic collection of short stories and poetry with topics on climate strange, connecting the geopolitical dots, the myth of us versus them, and the idiocy of war. Please refer to the COPYRIGHTS file and the text_citation.cff file for the reference copyright information and for the complete citations of the reference sources, respectively.
Extract and replace elements using indices that start from zero (rather than one), as is common in mathematical notation and other programming languages.
An interface to the algorithms of Interpretable AI <https://www.interpretable.ai> from the R programming language. Interpretable AI provides various modules, including Optimal Trees for classification, regression, prescription and survival analysis, Optimal Imputation for missing data imputation and outlier detection, and Optimal Feature Selection for exact sparse regression. The iai package is an open-source project. The Interpretable AI software modules are proprietary products, but free academic and evaluation licenses are available.
Models, analyzes, and forecasts financial intraday signals. This package currently supports a univariate state-space model for intraday trading volume provided by Chen (2016) <doi:10.2139/ssrn.3101695>.
An implementation of various methods for estimating intrinsic dimension of vector-valued dataset or distance matrix. Most methods implemented are based on different notion of fractal dimension such as the capacity dimension, the box-counting dimension, and the information dimension.
Implementation of analytical and sampling-based power analyses for the Wald, likelihood ratio (LR), score, and gradient tests. Can be applied to item response theory (IRT) models that are fitted using marginal maximum likelihood estimation. The methods are described in our paper (Zimmer et al. (2022) <doi:10.1007/s11336-022-09883-5>).
This is the central location for data and tools for the development, maintenance, analysis, and deployment of the International Soil Radiocarbon Database (ISRaD). ISRaD was developed as a collaboration between the U.S. Geological Survey Powell Center and the Max Planck Institute for Biogeochemistry. This R package provides tools for accessing and manipulating ISRaD data, compiling local data using the ISRaD data structure, and simple query and reporting functions for ISRaD. For more detailed information visit the ISRaD website at: <https://soilradiocarbon.org/>.