Kramdown is a library for parsing and converting a superset of Markdown. It is completely written in Ruby, supports standard Markdown (with some minor modifications) and various extensions that have been made popular by the PHP Markdown Extra
package and Maruku
.
i3status-rs
is a feature-rich and resource-friendly replacement for i3status, written in pure Rust. It provides a way to display blocks
of system information (time, battery status, volume, etc) on the i3 bar. It is also compatible with sway.
This package provides a Type 1 font with images of the 42 counties of Romania, constructed using a general method which is described in detail in the documentation. The package name is an abbreviation of judetele Romaniei (i.e., counties of Romania).
Visualizations to explain the results of a topological data analysis. The goal of topological data analysis is to identify persistent topological structures, such as loops (topological circles) and voids (topological spheres), in data sets. The output of an analysis using the TDA package is a Rips diagram (named after the mathematician Eliyahu Rips). The goal of RPointCloud
is to fill in these holes in the data by providing tools to visualize the features that help explain the structures found in the Rips diagram. See McGee
and colleagues (2024) <doi:10.1101/2024.05.16.593927>.
Implementation of a model-based clustering algorithm for ranking data (C. Biernacki, J. Jacques (2013) <doi:10.1016/j.csda.2012.08.008>). Multivariate rankings as well as partial rankings are taken into account. This algorithm is based on an extension of the Insertion Sorting Rank (ISR) model for ranking data, which is a meaningful and effective model parametrized by a position parameter (the modal ranking, quoted by mu) and a dispersion parameter (quoted by pi). The heterogeneity of the rank population is modelled by a mixture of ISR, whereas conditional independence assumption is considered for multivariate rankings.
This package infers the causal effect of an intervention on a multivariate response through the use of Multivariate Bayesian Structural Time Series models (MBSTS) as described in Menchetti & Bojinov (2020) <arXiv:2006.12269>
. The package also includes functions for model building and forecasting.
This package provides a chess program which allows the user to create a game, add moves, check for legal moves and game result, plot the board, take back, read and write FEN (Forsythâ Edwards Notation). A basic chess engine based on minimax is implemented.
This package provides functions to make lifetables and to calculate hazard function estimate using Poisson regression model with splines. Includes function to draw simple flowchart of cohort study. Function boxesLx()
makes boxes of transition rates between states. It utilizes Epi package Lexis data.
This package contains functions to create life history parameter plots from raw data. The plots are created using ggplot2', and calculations done using the tidyverse collection of packages. The package contains references to FishBase
(Froese R., Pauly D., 2023) <https://www.fishbase.se/>.
This package provides a quick and easy access to the GraphHopper
Directions API. GraphHopper
<https://www.graphhopper.com/> itself is a routing engine based on OpenStreetMap
data. API responses can be converted to simple feature (sf) objects in a convenient way.
Multiply robust estimation for population mean (Han and Wang 2013) <doi:10.1093/biomet/ass087>, regression analysis (Han 2014) <doi:10.1080/01621459.2014.880058> (Han 2016) <doi:10.1111/sjos.12177> and quantile regression (Han et al. 2019) <doi:10.1111/rssb.12309>.
Make R data available in Web-based virtual reality experiences for immersive, cross-platform data visualizations. Includes the gg-aframe JavaScript
package for a Grammar of Graphics declarative HTML syntax to create 3-dimensional data visualizations with Mozilla A-Frame <https://aframe.io>.
Pre-process for discrete time series data set which is not continuous at the column of date'. Refilling records of missing date and other columns to the hollow data set so that final data set is able to be dealt with time series analysis.
This package provides a file format for storing tensors that is secure (doesn't allow for code execution), fast and simple to implement. safetensors
also enables cross language and cross frameworks compatibility making it an ideal format for storing machine learning model weights.
This package provides functions for making low-level API requests to Amazon Web Services. The functions handle building, signing, and sending requests, and receiving responses. They are designed to help build higher-level interfaces to individual services, such as Simple Storage Service (S3).
rJSmin
is a javascript minifier written in Python. The minifier is based on the semantics of jsmin.c by Douglas Crockford. The module is a re-implementation aiming for speed, so it can be used at runtime (rather than during a preprocessing step).
TomParse is a TomDoc parser for Ruby. It takes a code comment as input and parses it into a convenient object-oriented structure in accordance with the TomDoc standard. See TomDoc for more information about the TomDoc format.
Reproducible, programmatic retrieval of datasets from the Roper Center data archive. The Roper Center for Public Opinion Research <https://ropercenter.cornell.edu> maintains the largest archive of public opinion data in existence, but researchers using these datasets are caught in a bind. The Center's terms and conditions bar redistribution of downloaded datasets, but to ensure that one's work can be reproduced, assessed, and built upon by others, one must provide access to the raw data one employed. The `ropercenter` package cuts this knot by providing registered users with programmatic, reproducible access to Roper Center datasets from within R.
Interact with the Brandwatch API <https://developers.brandwatch.com/docs>. Allows you to authenticate to the API and obtain data for projects, queries, query groups tags and categories. Also allows you to directly obtain mentions and aggregate data for a specified query or query group.
Create simplex plots to visualize the similarity between single-cells and selected clusters in a 1-/2-/3-simplex space. Velocity information can be added as an additional layer. See Liu J, Wang Y et al (2023) <doi:10.1093/bioinformatics/btaf119> for more details.
Data package for the supplementary data in Prem et al. (2017) <doi:10.1371/journal.pcbi.1005697> and Prem et al. <doi:10.1371/journal.pcbi.1009098>. Provides easy access to contact data for 177 countries, for use in epidemiological, demographic or social sciences research.
Compute bivariate dependence measures and perform bivariate competing risks analysis under the generalized Farlie-Gumbel-Morgenstern (FGM) copula. See Shih and Emura (2018) <doi:10.1007/s00180-018-0804-0> and Shih and Emura (2019) <doi:10.1007/s00362-016-0865-5> for details.
This package provides user tokens for ICES web services that require authentication and authorization. Web services covered by this package are ICES VMS database, the ICES DATSU web services, and the ICES SharePoint
site <https://www.ices.dk/data/tools/Pages/WebServices.aspx>
.
Calculation of key bacterial growth curve parameters using fourth degree polynomial functions. Six growth curve parameters are provided including peak growth rate, doubling time, lag time, maximum growth, and etc. ipolygrowth takes time series data from individual biological samples (with technical replicates) or multiple samples.