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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
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rust-cargo-edit 0.13.0
Dependencies: curl@8.6.0 libgit2@1.8.4 libssh2@1.10.0 openssl@3.0.8 zlib@1.3
Channel: guix
Location: gnu/packages/rust-apps.scm (gnu packages rust-apps)
Home page: https://github.com/killercup/cargo-edit
Licenses: ASL 2.0 Expat
Synopsis: Add and remove dependencies from the command line
Description:

This package extends Cargo to allow you to add and remove dependencies by modifying your Cargo.toml file from the command line.

texlive-rosario 2025.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/rosario
Licenses: LPPL 1.3c
Synopsis: Using the Rosario fonts with LaTeX
Description:

The package provides the files required to use the Rosario fonts with LaTeX. Rosario is a set of four fonts provided by Hector Gatti.

r-rcpparmadillo 14.4.3-1
Propagated dependencies: r-rcpp@1.0.14
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://github.com/RcppCore/RcppArmadillo
Licenses: GPL 2+
Synopsis: Rcpp integration for the Armadillo linear algebra library
Description:

Armadillo is a templated C++ linear algebra library that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. This package includes the header files from the templated Armadillo library.

r-rmstbayespara 0.1.0
Propagated dependencies: r-zipfr@0.6-70 r-rstan@2.32.7 r-loo@2.8.0 r-crayon@1.5.3 r-brms@2.22.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rmstBayespara
Licenses: GPL 3+
Synopsis: Bayesian Restricted Mean Survival Time for Cluster Effect
Description:

The parametric Bayes analysis for the restricted mean survival time (RMST) with cluster effect, as described in Hanada and Kojima (2024) <doi:10.48550/arXiv.2406.06071>. Bayes estimation with random-effect and frailty-effect can be applied to several parametric models useful in survival time analysis. The RMST under these parametric models can be computed from the obtained posterior samples.

r-clusternomics 0.1.1
Propagated dependencies: r-plyr@1.8.9 r-mass@7.3-65 r-magrittr@2.0.3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/evelinag/clusternomics
Licenses: Expat
Synopsis: Integrative Clustering for Heterogeneous Biomedical Datasets
Description:

Integrative context-dependent clustering for heterogeneous biomedical datasets. Identifies local clustering structures in related datasets, and a global clusters that exist across the datasets.

r-dataretrieval 2.7.21
Propagated dependencies: r-xml2@1.3.8 r-whisker@0.4.1 r-sf@1.0-21 r-readr@2.1.5 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-httr2@1.1.2 r-curl@6.2.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dataRetrieval
Licenses: CC0
Synopsis: Retrieval Functions for USGS and EPA Hydrology and Water Quality Data
Description:

Collection of functions to help retrieve U.S. Geological Survey and U.S. Environmental Protection Agency water quality and hydrology data from web services.

r-taskscheduler 1.8
Propagated dependencies: r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/bnosac/taskscheduleR
Licenses: AGPL 3
Synopsis: Schedule R Scripts and Processes with the Windows Task Scheduler
Description:

Schedule R scripts/processes with the Windows task scheduler. This allows R users to automate R processes on specific time points from R itself.

r-bronchialil13 1.46.0
Propagated dependencies: r-affy@1.86.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: http://www.biostat.harvard.edu/~carey
Licenses: GPL 2
Synopsis: time course experiment involving il13
Description:

derived from CNMC (pepr.cnmcresearch.org) http://pepr.cnmcresearch.org/browse.do?action=list_prj_exp&projectId=95 Human Bronchial Cell line A549.

r-branchpointer 1.34.0
Propagated dependencies: r-stringr@1.5.1 r-s4vectors@0.46.0 r-rtracklayer@1.68.0 r-plyr@1.8.9 r-kernlab@0.9-33 r-iranges@2.42.0 r-ggplot2@3.5.2 r-genomicranges@1.60.0 r-genomeinfodb@1.44.0 r-gbm@2.2.2 r-data-table@1.17.4 r-cowplot@1.1.3 r-caret@7.0-1 r-bsgenome-hsapiens-ucsc-hg38@1.4.5 r-biostrings@2.76.0 r-biomart@2.64.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/branchpointer
Licenses: Modified BSD
Synopsis: Prediction of intronic splicing branchpoints
Description:

Predicts branchpoint probability for sites in intronic branchpoint windows. Queries can be supplied as intronic regions; or to evaluate the effects of mutations, SNPs.

r-kernelfactory 0.3.0
Propagated dependencies: r-auc@0.3.2 r-genalg@0.2.1 r-kernlab@0.9-33 r-randomforest@4.7-1.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/kernelFactory/
Licenses: GPL 2+
Synopsis: Ensemble of kernel machines
Description:

Kernel factory is an ensemble method where each base classifier (random forest) is fit on the kernel matrix of a subset of the training data.

r-shinyvalidate 0.1.3
Propagated dependencies: r-glue@1.8.0 r-htmltools@0.5.8.1 r-rlang@1.1.6 r-shiny@1.10.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://rstudio.github.io/shinyvalidate/
Licenses: Expat
Synopsis: Input validation for Shiny apps
Description:

This package improves the user experience of Shiny apps by helping to provide feedback when required inputs are missing, or input values are not valid.

texlive-revtex4 2025.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/revtex4-0
Licenses: LPPL (any version)
Synopsis: Styles for various physics journals (old version)
Description:

This is an old version of revtex, and is kept as a courtesy to users having difficulty with the incompatibility of that latest version.

perl-xml-regexp 0.04
Dependencies: perl-xml-parser@2.46
Channel: guix
Location: gnu/packages/xml.scm (gnu packages xml)
Home page: https://metacpan.org/release/XML-RegExp
Licenses: GPL 1+
Synopsis: Perl regular expressions for XML tokens
Description:

XML::RegExp contains regular expressions for the following XML tokens: BaseChar, Ideographic, Letter, Digit, Extender, CombiningChar, NameChar, EntityRef, CharRef, Reference, Name, NmToken, and AttValue.

node-fill-range 7.0.1
Dependencies: node-to-regex-range@5.0.1
Channel: rde
Location: contrib/packages/node-xyz.scm (contrib packages node-xyz)
Home page: https://github.com/jonschlinkert/fill-range
Licenses: Expat
Synopsis: Fill in a range of numbers or letters, optionally passing an increment or `step` to use, or create a regex-compatible range with `options.toRegex`
Description:

Fill in a range of numbers or letters, optionally passing an increment or `step` to use, or create a regex-compatible range with `options.toRegex`

r-axisandallies 0.1.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=axisandallies
Licenses: Expat
Synopsis: Axis and Allies Spring
Description:

Simulates battles in the board game Axis and Allies Spring 1942, and calculates your probability of winning a battle. This speeds the game up significantly.

r-authoritative 0.2.0
Propagated dependencies: r-stringi@1.8.7
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/Bisaloo/authoritative
Licenses: Expat
Synopsis: Parse and Deduplicate Author Names
Description:

Utilities to parse authors fields from DESCRIPTION files and general purpose functions to deduplicate names in database, beyond the specific case of R package authors.

r-bioimagetools 1.1.9
Propagated dependencies: r-tiff@0.1-12 r-httr@1.4.7 r-ebimage@4.50.0
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://bioimaginggroup.github.io/bioimagetools/
Licenses: GPL 3
Synopsis: Tools for Microscopy Imaging
Description:

This package provides tools for 3D imaging, mostly for biology/microscopy. Read and write TIFF stacks. Functions for segmentation, filtering and analyzing 3D point patterns.

r-cookiemonster 0.0.3
Propagated dependencies: r-vctrs@0.6.5 r-urltools@1.7.3 r-tibble@3.2.1 r-stringi@1.8.7 r-rappdirs@0.3.3 r-openssl@2.3.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cookiemonster
Licenses: GPL 3+
Synopsis: Your Friendly Solution to Managing Browser Cookies
Description:

This package provides a convenient tool to store and format browser cookies and use them in HTTP requests (for example, through httr2', httr or curl').

r-classicaltest 0.7.5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=classicaltest
Licenses: GPL 2+
Synopsis: Classical Test Theory (CTT) Analysis
Description:

This package provides functions for classical test theory analysis, following methods presented by Wu et al. (2006) <doi:10.1007/978-981-10-3302-5>.

r-desirability2 0.2.0
Propagated dependencies: r-tibble@3.2.1 r-s7@0.2.0 r-rlang@1.1.6 r-purrr@1.0.4 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://desirability2.tidymodels.org
Licenses: Expat
Synopsis: Desirability Functions for Multiparameter Optimization
Description:

In-line functions for multivariate optimization via desirability functions (Derringer and Suich, 1980, <doi:10.1080/00224065.1980.11980968>) with easy use within dplyr pipelines.

r-hpackedbubble 0.1.0
Propagated dependencies: r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/czxa/hpackedbubble
Licenses: Expat
Synopsis: Create Split Packed Bubble Charts
Description:

By binding R functions and the Highcharts <http://www.highcharts.com/> charting library, hpackedbubble package provides a simple way to draw split packed bubble charts.

r-imcexperiment 0.99.0
Propagated dependencies: r-summarizedexperiment@1.38.1 r-spatstat-geom@3.4-1 r-singlecellexperiment@1.30.1 r-s4vectors@0.46.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=imcExperiment
Licenses: Expat
Synopsis: Mass Cytometry S4 Class Structure Pipeline for Images
Description:

Containerizes cytometry data and allows for S4 class structure to extend slots related to cell morphology, spatial coordinates, phenotype network information, and unique cellular labeling.

r-lowmemtkmeans 0.1.4
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lowmemtkmeans
Licenses: GPL 3+
Synopsis: Low Memory Use Trimmed K-Means
Description:

This package performs the trimmed k-means clustering algorithm with lower memory use. It also provides a number of utility functions such as BIC calculations.

r-mldr-datasets 0.4.2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/fcharte/mldr.datasets
Licenses: LGPL 3+ FSDG-compatible
Synopsis: R Ultimate Multilabel Dataset Repository
Description:

Large collection of multilabel datasets along with the functions needed to export them to several formats, to make partitions, and to obtain bibliographic information.

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