Helps to easily submit a microarray dataset and the associated sample information to GEO by preparing a single file for upload (direct deposit).

Estimates Two-way Fixed Effects difference-in-differences/event-study models using the imputation-based approach proposed by Borusyak, Jaravel, and Spiess (2021).

This package provides an easy to use interface to the Google Pub/Sub REST API <https://cloud.google.com/pubsub/docs/reference/rest>.

Some interpolation methods taken from Boost': barycentric rational interpolation, modified Akima interpolation, PCHIP (piecewise cubic Hermite interpolating polynomial) interpolation, and Catmull-Rom splines.

This package provides a collection of classes and methods for working with times and dates. The code was originally available in S-PLUS'.

Custom template and output formats for use with rmarkdown. Produce Edward Tufte-style handouts in html formats with full support for rmarkdown features.

Armadillo is a templated C++ linear algebra library that aims towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Various matrix decompositions are provided through optional integration with LAPACK and ATLAS libraries. This package includes the header files from the templated Armadillo library.

The parametric Bayes analysis for the restricted mean survival time (RMST) with cluster effect, as described in Hanada and Kojima (2024) <doi:10.48550/arXiv.2406.06071>. Bayes estimation with random-effect and frailty-effect can be applied to several parametric models useful in survival time analysis. The RMST under these parametric models can be computed from the obtained posterior samples.

Kernel factory is an ensemble method where each base classifier (random forest) is fit on the kernel matrix of a subset of the training data.

This package improves the user experience of Shiny apps by helping to provide feedback when required inputs are missing, or input values are not valid.

Emacs major mode for editing Raku code. It supports basic syntax highlighting, basic indentation, identifier index menu (variables, subs, classes, etc.), and REPL interaction.

This is an old version of revtex, and is kept as a courtesy to users having difficulty with the incompatibility of that latest version.

XML::RegExp contains regular expressions for the following XML tokens: BaseChar, Ideographic, Letter, Digit, Extender, CombiningChar, NameChar, EntityRef, CharRef, Reference, Name, NmToken, and AttValue.

derived from CNMC (pepr.cnmcresearch.org) http://pepr.cnmcresearch.org/browse.do?action=list_prj_exp&projectId=95 Human Bronchial Cell line A549.

Integrative context-dependent clustering for heterogeneous biomedical datasets. Identifies local clustering structures in related datasets, and a global clusters that exist across the datasets.

Collection of functions to help retrieve U.S. Geological Survey and U.S. Environmental Protection Agency water quality and hydrology data from web services.

Schedule R scripts/processes with the Windows task scheduler. This allows R users to automate R processes on specific time points from R itself.

This package provides a replacement for the extract function from the raster package that is suitable for extracting raster values using sf polygons.

Given_core is the basic functionality behind rspec-given and minitest-given, extensions that allow the use of Given/When/Then terminology when defining specifications.

Simulates battles in the board game Axis and Allies Spring 1942, and calculates your probability of winning a battle. This speeds the game up significantly.

Utilities to parse authors fields from DESCRIPTION files and general purpose functions to deduplicate names in database, beyond the specific case of R package authors.

This package provides tools for 3D imaging, mostly for biology/microscopy. Read and write TIFF stacks. Functions for segmentation, filtering and analyzing 3D point patterns.

This package provides functions for classical test theory analysis, following methods presented by Wu et al. (2006) <doi:10.1007/978-981-10-3302-5>.

This package provides a convenient tool to store and format browser cookies and use them in HTTP requests (for example, through httr2', httr or curl').