As of RStudio v1.3, the preferences in the Global Options dialog (and a number of other preferences that arenâ t) are now saved in simple, plain-text JSON files. This package provides an interface for working with these RStudio JSON preference files to easily make modifications without using the point-and-click option menus. This is particularly helpful when working on teams to ensure a unified experience across machines and utilizing settings for best practices.

This package provides an expressionSet containing gene expression data from 60 bone marrow samples of patients with one of the four main types of leukemia (ALL, AML, CLL, CML) or non-leukemia.

This is a package to read raw accelerometry from GT3X+ accelerometry data and plain table data to calculate the Activity Index from Bai et al. (2016) doi:10.1371/journal.pone.0160644.

The core functionality of the package is to provide coordinates of genes on the BioCarta pathway images and to provide methods to add self-defined graphics to the genes of interest.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was C\_elegans\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG\_U95Av2\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was MG-U74Cv2\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was MG-U74Bv2\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was MG-U74Av2\_probe\_tab.

Use C++ Standard Template Library containers interactively in R. Includes sets, unordered sets, multisets, unordered multisets, maps, unordered maps, multimaps, unordered multimaps, stacks, queues, priority queues, vectors, deques, forward lists, and lists.

General functions for convolutions of data. Moving average, running median, and other filters are available. Bibliography regarding the functions can be found in the following text. Richard G. Brereton (2003) <ISBN:9780471489771>.

This package provides a function allowing to normalize a JSON string, for example by adding double quotes around the keys when they are missing. Also provides RStudio addins for the same purpose.

Data and code for the paper by Ehm, Gneiting, Jordan and Krueger ('Of Quantiles and Expectiles: Consistent Scoring Functions, Choquet Representations, and Forecast Rankings', JRSS-B, 2016 <DOI:10.1111/rssb.12154>).

Computes the routing distribution, the expectation of the number of broadcasts, transmissions and receptions considering an Opportunistic transport model. It provides theoretical results and also estimated values based on Monte Carlo simulations.

R client and utilities for Seven Bridges Platform API, from Cancer Genomics Cloud to other Seven Bridges supported platforms. API documentation is hosted publicly at <https://docs.sevenbridges.com/docs/the-api>.

This package provides platform for Vedic calendar system having several functionalities to facilitate conversion between Gregorian and Vedic calendar systems, and helpful in examining its impact in the time series analysis domain.

Flux (mass per unit time) and Load (mass) are computed from timeseries estimates of analyte concentration and discharge. Concentration timeseries are computed from regression between surrogate and user-provided analyte. Uncertainty in calculations is estimated using bootstrap resampling. Code for the processing of acoustic backscatter from horizontally profiling acoustic Doppler current profilers is provided. All methods detailed in Livsey et al (2020) <doi:10.1007/s12237-020-00734-z>, Livsey et al (2023) <doi:10.1029/2022WR033982>, and references therein.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_MG-430B\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_MG-430A\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG-U133A\_2\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was X\_laevis\_2\_probe\_tab.

Implementation of new discrete statistical distributions. Each distribution includes the traditional functions as well as an additional function called the family function, which can be used to estimate parameters within the gamlss framework.

This package contains financial math functions and introductory derivative functions included in the Society of Actuaries and Casualty Actuarial Society Financial Mathematics exam, and some topics in the Models for Financial Economics exam.

Computes likelihood ratios based on pigmentation traits. Also, it allows computing conditional probabilities for unidentified individuals based on missing person characteristics. A set of tailored plots are incorporated to analyze likelihood ratio distributions.