This package provides mappings from Entrez gene identifiers to various annotations for the genome of the model fruit fly Drosophila melanogaster.

This package implements data manipulation methods such as cast, aggregate, and merge/join for Matrix and Matrix-like objects.

This package is an enhancement of the Text.Regex library. It wraps the PCRE C library providing Perl-compatible regular expressions.

Pleaserun is a tool to generate startup scripts and service definitions. It targets service managers such as systemd, Upstart, launchd, sysv init, and runit.

This LaTeX package provides a relaxed font encoding to make available to a font designer more slots for insertion of ligatures and accented characters.

Pipeline to analyze and merge data files produced by BioLegend's LEGENDScreen or BD Human Cell Surface Marker Screening Panel (BD Lyoplates).

Builds interactive d3.js hierarchical visualisation easily. D3partitionR makes it easy to build and customize sunburst, circle treemap, treemap, partition chart, ...

This package creates text, LaTeX', Markdown, or Bootstrap-styled HTML-formatted odds ratio tables with confidence intervals for multiple logistic regression models.

This package provides tools for working with Gustavo Niemeyer's geohash coordinate system, including API for interacting with other common R GIS libraries.

Give advice about good practices when building R packages. Advice includes functions and syntax to avoid, package structure, code complexity, code formatting, etc.

Leading/lagging a panel, creating dummy variables, taking panel differences, looking for panel autocorrelations, and more. Implemented via a data.table back end.

An extension of animate.css that allows user to easily add animations to any UI element in shiny app using the elements id.

An efficient moment-free estimator of the Sharpe ratio, or signal-to-noise ratio, for heavy-tailed data (see <arXiv:1505.01333>).

This package provides the ROBOSRMSMOTE (Robust Oversampling with RM-SMOTE) framework for imbalanced classification tasks. This package extends Mahalanobis distance-based oversampling techniques by integrating robust covariance estimators to better handle outliers and complex data distributions. The implemented methodology builds upon and significantly expands the RM-SMOTE algorithm originally proposed by Taban et al. (2025) <doi:10.1007/s10260-025-00819-8>.

Examples for Seamless R and C++ integration The Rcpp package contains a C++ library that facilitates the integration of R and C++ in various ways. This package provides some usage examples. Note that the documentation in this package currently does not cover all the features in the package. The site <https://gallery.rcpp.org> regroups a large number of examples for Rcpp'.

This package contains functions for building GenomicState objects from different annotation sources such as Gencode. It also provides access to these files at JHPCE.

This package provides airline on-time data for all flights departing NYC in 2013. It also includes useful metadata on airlines, airports, weather, and planes.

Emacs Refactor (EMR) is a framework for providing language-specific refactoring in Emacs. It includes refactoring commands for a variety of languages, including elisp itself.

This package provides Python bindings to the Rust rpds crate for persistent data structures. It was written initially to support replacing python-pyrsistent.

This package consolidates a comprehensive set of information measurements, encompassing mutual information, conditional mutual information, interaction information, partial information decomposition, and part mutual information.

This package provides functions to browse the harmonized metadata for large omics databases. This package also supports data navigation if the metadata incorporates ontology.

Compute an anomaly score for multivariate time series based on the k-nearest neighbors algorithm. Different computations of distances between time series are provided.

Two practical tests are provided for assessing whether multiple covariates in a treatment group and a matched control group are balanced in observational studies.

Estimation of the effect of each income source on income inequalities based on the decomposition of Lerman and Yitzhaki (1985) <doi:10.2307/1928447>.