This package contains the US Census Bureau's 2020 ZCTA to County Relationship File, as well as convenience functions to translate between States, Counties and ZIP Code Tabulation Areas (ZCTAs).

This package provides a common interface to multiple JSON libraries, including Oj, Yajl, the JSON gem (with C-extensions), the pure-Ruby JSON gem, NSJSONSerialization, gson.rb, JrJackson, and OkJson.

Converting ascii text into (floating-point) numeric values is a very common problem. The fast_float header-only C++ library by Daniel Lemire does it very well and very fast at up to or over to 1 gigabyte per second as described in more detail in <doi:10.1002/spe.2984>. fast_float is licensed under the Apache 2.0 license and provided here for use by other R packages via a simple LinkingTo: statement.

The Axoloti patcher offers a “patcher” environment similar to Pure Data for sketching digital audio algorithms. The patches run on a standalone powerful microcontroller board: Axoloti Core. This package provides the runtime.

This package provides processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.

This package provides an R Markdown format for converting an R Markdown document to a grid-oriented dashboard. The dashboard flexibly adapts the size of its components to the containing web page.

The basic command of the package is \relsize, whose argument is a number of \magsteps to change size; from this are defined commands \larger, \smaller, \textlarger, etc.

Base-level (i.e. cytosine-level) counts for a collection of public bisulfite-seq datasets (e.g., WGBS and RRBS), provided as SummarizedExperiment objects with sample- and base-level metadata.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Medicago\_probe\_tab.

Research of subgroups in random clinical trials with binary outcome and two treatments groups. This is an adaptation of the Jared Foster method (<https://www.ncbi.nlm.nih.gov/pubmed/21815180>).

Bayesian estimation of dynamic conditional correlation GARCH model for multivariate time series volatility (Fioruci, J.A., Ehlers, R.S. and Andrade-Filho, M.G., (2014). <doi:10.1080/02664763.2013.839635>.

Common API for filtering data stored in different data models. Provides multiple filter types and reproducible R code. Works standalone or with shinyCohortBuilder as the GUI for interactive Shiny apps.

Predict future values with hybrid combinations of Pattern Sequence based Forecasting (PSF), Autoregressive Integrated Moving Average (ARIMA), Empirical Mode Decomposition (EMD) and Ensemble Empirical Mode Decomposition (EEMD) methods based hybrid methods.

Transform model coefficients into flexible forest plots using ggplot2'. Provides helpers to standardize coefficient data from a range of modelling workflows and render publication-ready forest plots with a consistent interface.

MatLab'-Style Modeling of Optimization Problems with R'. This package provides a set of convenience functions to transform a MatLab'-style optimization modeling structure to its ROI equivalent.

Implementation of a computationally efficient method for simulating queues with arbitrary arrival and service times. Please see Ebert, Wu, Mengersen & Ruggeri (2020, <doi:10.18637/jss.v095.i05>) for further details.

Enables the complete removal of various Shiny components, such as inputs, outputs and modules. It also aids in the removal of observers that have been created in dynamically created modules.

Presmoothed estimators of survival, density, cumulative and non-cumulative hazard functions with right-censored survival data. For details, see Lopez-de-Ullibarri and Jacome (2013) <doi:10.18637/jss.v054.i11>.

Debugging pipe chains often consists of viewing the output after each step. This package adds RStudio addins and two functions that allow outputing each or select steps in a convenient way.

As of RStudio v1.3, the preferences in the Global Options dialog (and a number of other preferences that arenâ t) are now saved in simple, plain-text JSON files. This package provides an interface for working with these RStudio JSON preference files to easily make modifications without using the point-and-click option menus. This is particularly helpful when working on teams to ensure a unified experience across machines and utilizing settings for best practices.

This package provides an expressionSet containing gene expression data from 60 bone marrow samples of patients with one of the four main types of leukemia (ALL, AML, CLL, CML) or non-leukemia.

This is a package to read raw accelerometry from GT3X+ accelerometry data and plain table data to calculate the Activity Index from Bai et al. (2016) doi:10.1371/journal.pone.0160644.

The core functionality of the package is to provide coordinates of genes on the BioCarta pathway images and to provide methods to add self-defined graphics to the genes of interest.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was C\_elegans\_probe\_tab.