_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
emacs-org-side-tree 20240601.1001
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://github.com/localauthor/org-side-tree
Licenses:
Build system: melpa
Synopsis: Navigate Org outlines in side window tree
Description:

Documentation at https://melpa.org/#/org-side-tree

tree-sitter-clojure 0.0.13
Channel: atomized
Location: atomized/packages/emacs-xyz.scm (atomized packages emacs-xyz)
Home page: https://github.com/sogaiu/tree-sitter-clojure
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Clojure grammar
Description:

This package provides a Clojure grammar for the Tree-sitter library.

tree-sitter-mermaid 0.0.2-0.90ae195
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/monaqa/tree-sitter-mermaid
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Mermaid grammar
Description:

This package provides a Mermaid grammar for the Tree-sitter library.

tree-sitter-f-sharp 0.1.0-0.5141851
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/ionide/tree-sitter-fsharp
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter F# grammars
Description:

This package provides F# grammars for the Tree-sitter library.

tree-sitter-tlaplus 1.5.0
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tlaplus-community/tree-sitter-tlaplus
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter TLA+ grammar
Description:

This package provides a TLA+ grammar for the Tree-sitter library.

tree-sitter-netlinx 1.0.4
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/Norgate-AV/tree-sitter-netlinx
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter NetLinx grammar
Description:

This package provides a NetLinx grammar for the Tree-sitter library.

tree-sitter-fortran 0.5.1-0.8334abc
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/stadelmanma/tree-sitter-fortran
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Fortran grammar
Description:

This package provides a Fortran grammar for the Tree-sitter library.

tree-sitter-clojure 0.0.13
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/sogaiu/tree-sitter-clojure
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Clojure grammar
Description:

This package provides a Clojure grammar for the Tree-sitter library.

tree-sitter-graphql 0.0.1-0.5e66e96
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/bkegley/tree-sitter-graphql
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter GraphQL grammar
Description:

This package provides a GraphQL grammar for the Tree-sitter library.

tree-sitter-jsonnet 0.0.1-0.ddd075f
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/sourcegraph/tree-sitter-jsonnet
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter JSONNET grammar
Description:

This package provides a JSONNET grammar for the Tree-sitter library.

tree-sitter-doxygen 1.1.0-0.1e28054
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter-grammars/tree-sitter-doxygen
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Doxygen grammar
Description:

This package provides a Doxygen grammar for the Tree-sitter library.

tree-sitter-arduino 0.24.0
Dependencies: tree-sitter-c@0.23.5 tree-sitter-cpp@0.23.4
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter-grammars/tree-sitter-arduino
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Arduino grammar
Description:

This package provides an Arduino grammar for the Tree-sitter library.

tree-sitter-bitbake 1.1.0
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter-grammars/tree-sitter-bitbake
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter BitBake grammar
Description:

This package provides a BitBake grammar for the Tree-sitter library.

tree-sitter-haskell 0.15.0
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter/tree-sitter-haskell
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Haskell grammar
Description:

This package provides a Haskell grammar for the Tree-sitter library.

tree-sitter-verilog 1.0.3
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter/tree-sitter-verilog
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Verilog grammar
Description:

This package provides a Verilog grammar for the Tree-sitter library.

tree-sitter-chatito 0.5.0
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter-grammars/tree-sitter-chatito
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Chatito grammar
Description:

This package provides a Chatito grammar for the Tree-sitter library.

tree-sitter-clarity 0.0.5
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/xlittlerag/tree-sitter-clarity
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Clarity grammar
Description:

This package provides a Clarity grammar for the Tree-sitter library.

tree-sitter-kconfig 1.3.0
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter-grammars/tree-sitter-kconfig
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter Kconfig grammar
Description:

This package provides a Kconfig grammar for the Tree-sitter library.

tree-sitter-graphql 0-0.5e66e96
Channel: rrr
Location: rrr/packages/tree-sitter.scm (rrr packages tree-sitter)
Home page: https://github.com/bkegley/tree-sitter-graphql
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter GraphQL grammar
Description:

This package provides a GraphQL grammar for the Tree-sitter library.

elixir-process-tree 0.2.1
Channel: guix
Location: gnu/packages/elixir-xyz.scm (gnu packages elixir-xyz)
Home page: https://hexdocs.pm/process_tree/
Licenses: Expat
Build system: mix
Synopsis: Avoid global state in Elixir applications
Description:

This package provides a module for avoiding global state in Elixir applications.

tree-sitter-c-sharp 0.23.1
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/tree-sitter/tree-sitter-c-sharp
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter C# grammar
Description:

This package provides a C# grammar for the Tree-sitter library.

sbcl-draw-cons-tree 1.0-0.04334f5
Dependencies: sbcl-alexandria@1.4-0.009b7e5
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/phoe/draw-cons-tree/
Licenses: Unlicense
Build system: asdf/sbcl
Synopsis: Draw an ascii picture of a cons tree
Description:

cl-draw-cons-tree draws a cons tree in ASCII-art style.

tree-sitter-comment 0.3.0
Channel: guix
Location: gnu/packages/tree-sitter.scm (gnu packages tree-sitter)
Home page: https://github.com/stsewd/tree-sitter-comment
Licenses: Expat
Build system: tree-sitter
Synopsis: Tree-sitter comment tags (like TODO, FIXME) grammar
Description:

This package provides a comment tags (like TODO, FIXME) grammar for the Tree-sitter library.

r-treedimensiontest 0.0.2
Propagated dependencies: r-rdpack@2.6.4 r-rcpp@1.1.0 r-rcolorbrewer@1.1-3 r-nfactors@2.4.1.2 r-mlpack@4.7.0 r-igraph@2.2.1 r-fitdistrplus@1.2-4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TreeDimensionTest
Licenses: LGPL 3+
Build system: r
Synopsis: Trajectory Presence and Heterogeneity in Multivariate Data
Description:

Testing for trajectory presence and heterogeneity on multivariate data. Two statistical methods (Tenha & Song 2022) <doi:10.1371/journal.pcbi.1009829> are implemented. The tree dimension test quantifies the statistical evidence for trajectory presence. The subset specificity measure summarizes pattern heterogeneity using the minimum subtree cover. There is no user tunable parameters for either method. Examples are included to illustrate how to use the methods on single-cell data for studying gene and pathway expression dynamics and pathway expression specificity.

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