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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-prevalence 0.4.1
Dependencies: jags@4.3.1
Propagated dependencies: r-rjags@4-17 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: http://prevalence.cbra.be/
Licenses: GPL 2+
Build system: r
Synopsis: Tools for Prevalence Assessment Studies
Description:

The prevalence package provides Frequentist and Bayesian methods for prevalence assessment studies. IMPORTANT: the truePrev functions in the prevalence package call on JAGS (Just Another Gibbs Sampler), which therefore has to be available on the user's system. JAGS can be downloaded from <https://mcmc-jags.sourceforge.io/>.

r-plotmelm 0.1.5
Propagated dependencies: r-interactiontest@1.2 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=plotMElm
Licenses: GPL 3+
Build system: r
Synopsis: Plot Marginal Effects from Linear Models
Description:

Plot marginal effects for interactions estimated from linear models.

r-pot 1.1-11
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://pot.r-forge.r-project.org/
Licenses: GPL 2+
Build system: r
Synopsis: Generalized Pareto Distribution and Peaks Over Threshold
Description:

Some functions useful to perform a Peak Over Threshold analysis in univariate and bivariate cases, see Beirlant et al. (2004) <doi:10.1002/0470012382>. A user guide is available in the vignette.

r-plotlygeoassets 0.0.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/cpsievert/plotlyGeoAssets
Licenses: Expat
Build system: r
Synopsis: Render 'Plotly' Maps without an Internet Connection
Description:

Includes JavaScript files that allow plotly maps to render without an internet connection.

r-paris2024colours 0.2.0
Propagated dependencies: r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/maximekuntz/Paris2024Colours
Licenses: Expat
Build system: r
Synopsis: Color Palettes Inspired by Paris 2024 Olympic and Paralympic Games
Description:

Palettes inspired by Paris 2024 Olympic and Paralympic Games for data visualizations. Length of color palettes is configurable.

r-poppyramid 0.1.1
Propagated dependencies: r-tibble@3.3.0 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/musajajorge/popPyramid
Licenses: GPL 3
Build system: r
Synopsis: Population Pyramids
Description:

This package provides functions that facilitate the elaboration of population pyramids.

r-polarcap 1.0.1
Propagated dependencies: r-tidyr@1.3.1 r-countrycode@1.6.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/imehlhaff/PolarCAP
Licenses: CC0
Build system: r
Synopsis: Access the Polarization in Comparative Attitudes Project
Description:

Distributes data from the Polarization in Comparative Attitudes Project. Helper functions enable data retrieval in wide and tidy formats for user-defined countries and years. Provides support for case-insensitive country names in many languages. Mehlhaff (2022) <https://imehlhaff.net/files/Polarization%20and%20Democracy.pdf>.

r-proscorer 0.0.4
Propagated dependencies: r-proscorertools@0.0.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/raybaser/PROscorer
Licenses: Expat
Build system: r
Synopsis: Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments
Description:

An extensible repository of accurate, up-to-date functions to score commonly used patient-reported outcome (PRO), quality of life (QOL), and other psychometric and psychological measures. PROscorer', together with the PROscorerTools package, is a system to facilitate the incorporation of PRO measures into research studies and clinical settings in a scientifically rigorous and reproducible manner. These packages and their vignettes are intended to help establish and promote best practices for scoring PRO and PRO-like measures in research. The PROscorer Instrument Descriptions vignette contains descriptions of each instrument scored by PROscorer', complete with references. These instrument descriptions are suitable for inclusion in formal study protocol documents, grant proposals, and manuscript Method sections. Each PROscorer function is composed of helper functions from the PROscorerTools package, and users are encouraged to contribute new functions to PROscorer'. More scoring functions are currently in development and will be added in future updates.

r-photogea 1.4.0
Propagated dependencies: r-openxlsx@4.2.8.1 r-lattice@0.22-7 r-dfoptim@2023.1.0 r-deoptim@2.2-8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/eloch216/PhotoGEA
Licenses: Expat
Build system: r
Synopsis: Photosynthetic Gas Exchange Analysis
Description:

Read, process, fit, and analyze photosynthetic gas exchange measurements. Documentation is provided by several vignettes; also see Lochocki, Salesse-Smith, & McGrath (2025) <doi:10.1111/pce.15501>.

r-pass-lme 0.9.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pass.lme
Licenses: GPL 3
Build system: r
Synopsis: Power and Sample Size for Linear Mixed Effect Models
Description:

Power and sample size calculation for testing fixed effect coefficients in multilevel linear mixed effect models with one or more than one independent populations. Laird, Nan M. and Ware, James H. (1982) <doi:10.2307/2529876>.

r-pbibd 1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PBIBD
Licenses: GPL 2+
Build system: r
Synopsis: Partially Balanced Incomplete Block Designs
Description:

The PBIB designs are important type of incomplete block designs having wide area of their applications for example in agricultural experiments, in plant breeding, in sample surveys etc. This package constructs various series of PBIB designs and assists in checking all the necessary conditions of PBIB designs and the association scheme on which these designs are based on. It also assists in calculating the efficiencies of PBIB designs with any number of associate classes. The package also constructs Youden-m square designs which are Row-Column designs for the two-way elimination of heterogeneity. The incomplete columns of these Youden-m square designs constitute PBIB designs. With the present functionality, the package will be of immense importance for the researchers as it will help them to construct PBIB designs, to check if their PBIB designs and association scheme satisfy various necessary conditions for the existence, to calculate the efficiencies of PBIB designs based on any association scheme and to construct Youden-m square designs for the two-way elimination of heterogeneity. R. C. Bose and K. R. Nair (1939) <http://www.jstor.org/stable/40383923>.

r-patchsynctex 0.1-4
Propagated dependencies: r-stringr@1.6.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/EmmanuelCharpentier/patchSynctex
Licenses: GPL 2+
Build system: r
Synopsis: Communication Between Editor and Viewer for Literate Programs
Description:

This utility eases the debugging of literate documents ('noweb files) by patching the synchronization information (the .synctex(.gz) file) produced by pdflatex with concordance information produced by Sweave or knitr and Sweave or knitr ; this allows for bilateral communication between a text editor (visualizing the noweb source) and a viewer (visualizing the resultant PDF'), thus bypassing the intermediate TeX file.

r-parserpdr 1.1.2
Propagated dependencies: r-stringr@1.6.0 r-readr@2.1.6 r-progressr@0.18.0 r-parallelly@1.45.1 r-future@1.68.0 r-foreach@1.5.2 r-dofuture@1.1.2 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/martonkolossvary/parseRPDR
Licenses: AGPL 3+
Build system: r
Synopsis: Parse and Manipulate Research Patient Data Registry ('RPDR') Text Queries
Description:

This package provides functions to load Research Patient Data Registry ('RPDR') text queries from Partners Healthcare institutions into R. The package also provides helper functions to manipulate data and execute common procedures such as finding the closest radiological exams considering a given timepoint, or creating a DICOM header database from the downloaded images. All functionalities are parallelized for fast and efficient analyses.

r-portn 1.0.0
Propagated dependencies: r-rsolnp@2.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/ysd2004/portn
Licenses: GPL 2+
Build system: r
Synopsis: Portfolio Analysis for Nature
Description:

The functions are designed to find the efficient mean-variance frontier or portfolio weights for static portfolio (called Markowitz portfolio) analysis in resource economics or nature conservation. Using the nonlinear programming solver ('Rsolnp'), this package deals with the quadratic minimization of the variance-covariances without shorting (i.e., non-negative portfolio weights) studied in Ando and Mallory (2012) <doi:10.1073/pnas.1114653109>. See the examples, testing versions, and more details from: <https://github.com/ysd2004/portn>.

r-pedprobr 1.0.1
Propagated dependencies: r-pedtools@2.10.0 r-pedmut@0.9.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/magnusdv/pedprobr
Licenses: GPL 2+
Build system: r
Synopsis: Probability Computations on Pedigrees
Description:

An implementation of the Elston-Stewart algorithm for calculating pedigree likelihoods given genetic marker data (Elston and Stewart (1971) <doi:10.1159/000152448>). The standard algorithm is extended to allow inbred founders. pedprobr is part of the pedsuite', a collection of packages for pedigree analysis in R. In particular, pedprobr depends on pedtools for pedigree manipulations and pedmut for mutation modelling. For more information, see Pedigree Analysis in R (Vigeland, 2021, ISBN:9780128244302).

r-permutations 1.1-6
Propagated dependencies: r-partitions@1.10-9 r-numbers@0.9-2 r-magic@1.6-1 r-freealg@1.1-8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/RobinHankin/permutations
Licenses: GPL 2
Build system: r
Synopsis: The Symmetric Group: Permutations of a Finite Set
Description:

Manipulates invertible functions from a finite set to itself. Can transform from word form to cycle form and back. To cite the package in publications please use Hankin (2020) "Introducing the permutations R package", SoftwareX, volume 11 <doi:10.1016/j.softx.2020.100453>.

r-pakpmics2018hh 0.1.0
Propagated dependencies: r-tibble@3.3.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/myaseen208/PakPMICS2018hh
Licenses: GPL 2
Build system: r
Synopsis: Multiple Indicator Cluster Survey (MICS) 2017-18 Household Questionnaire Data for Punjab, Pakistan
Description:

This package provides data set and function for exploration of Multiple Indicator Cluster Survey (MICS) 2017-18 Household questionnaire data for Punjab, Pakistan. The results of the present survey are critically important for the purposes of Sustainable Development Goals (SDGs) monitoring, as the survey produces information on 32 global Sustainable Development Goals (SDGs) indicators. The data was collected from 53,840 households selected at the second stage with systematic random sampling out of a sample of 2,692 clusters selected using probability proportional to size sampling. Six questionnaires were used in the survey: (1) a household questionnaire to collect basic demographic information on all de jure household members (usual residents), the household, and the dwelling; (2) a water quality testing questionnaire administered in three households in each cluster of the sample; (3) a questionnaire for individual women administered in each household to all women age 15-49 years; (4) a questionnaire for individual men administered in every second household to all men age 15-49 years; (5) an under-5 questionnaire, administered to mothers (or caretakers) of all children under 5 living in the household; and (6) a questionnaire for children age 5-17 years, administered to the mother (or caretaker) of one randomly selected child age 5-17 years living in the household (<http://www.mics.unicef.org/surveys>).

r-profileci 1.1.1
Propagated dependencies: r-itp@1.2.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://paulnorthrop.github.io/profileCI/
Licenses: GPL 3+
Build system: r
Synopsis: Profiling a Log-Likelihood to Calculate Confidence Intervals
Description:

This package provides tools for profiling a user-supplied log-likelihood function to calculate confidence intervals for model parameters. Speed of computation can be improved by adjusting the step sizes in the profiling and/or starting the profiling from limits based on the approximate large sample normal distribution for the maximum likelihood estimator of a parameter. The accuracy of the limits can be set by the user. A plot method visualises the log-likelihood and confidence interval. Cases where the profile log-likelihood flattens above the value at which a confidence limit is defined can be handled, leading to a limit at plus or minus infinity. Disjoint confidence intervals will not be found.

r-poisbinordnonnor 1.5.3
Propagated dependencies: r-matrix@1.7-4 r-mass@7.3-65 r-genord@2.0.0 r-corpcor@1.6.10 r-bb@2019.10-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PoisBinOrdNonNor
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Generation of Up to Four Different Types of Variables
Description:

Generation of a chosen number of count, binary, ordinal, and continuous random variables, with specified correlations and marginal properties. The details of the method are explained in Demirtas (2012) <DOI:10.1002/sim.5362>.

r-protag 1.0.0
Propagated dependencies: r-rcolorbrewer@1.1-3 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=protag
Licenses: GPL 2
Build system: r
Synopsis: Search Tagged Peptides & Draw Highlighted Mass Spectra
Description:

In a typical protein labelling procedure, proteins are chemically tagged with a functional group, usually at specific sites, then digested into peptides, which are then analyzed using matrix-assisted laser desorption ionization - time of flight mass spectrometry (MALDI-TOF MS) to generate peptide fingerprint. Relative to the control, peptides that are heavier by the mass of the labelling group are informative for sequence determination. Searching for peptides with such mass shifts, however, can be difficult. This package, designed to tackle this inconvenience, takes as input the mass list of two or multiple MALDI-TOF MS mass lists, and makes pairwise comparisons between the labeled groups vs. control, and restores centroid mass spectra with highlighted peaks of interest for easier visual examination. Particularly, peaks differentiated by the mass of the labelling group are defined as a â pairâ , those with equal masses as a â matchâ , and all the other peaks as a â mismatchâ .For more bioanalytical background information, refer to following publications: Jingjing Deng (2015) <doi:10.1007/978-1-4939-2550-6_19>; Elizabeth Chang (2016) <doi:10.7171/jbt.16-2702-002>.

r-plantphysior 1.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/rameshram96/plantphysioR
Licenses: GPL 3+
Build system: r
Synopsis: Fundamental Formulas for Plant Physiology
Description:

This package provides functions tailored for scientific and student communities involved in plant science research. Functionalities encompass estimation chlorophyll content according to Arnon (1949) <doi:10.1104/pp.24.1.1>, determination water potential of Polyethylene glycol(PEG)6000 as in Michel and Kaufmann (1973) <doi:10.1104/pp.51.5.914> and functions related to estimation of yield related indices like Abiotic tolerance index as given by Moosavi et al.(2008)<doi:10.22059/JDESERT.2008.27115>, Geometric mean productivity (GMP) by Fernandez (1992) <ISBN:92-9058-081-X>, Golden Mean by Moradi et al.(2012)<doi:10.14207/ejsd.2012.v1n3p543>, HAM by Schneider et al.(1997)<doi:10.2135/cropsci1997.0011183X003700010007x>,MPI and TOL by Hossain etal., (1990)<doi:10.2135/cropsci1990.0011183X003000030030x>, RDI by Fischer et al. (1979)<doi:10.1071/AR9791001>,SSI by Fisher et al.(1978)<doi:10.1071/AR9780897>, STI by Fernandez (1993)<doi:10.22001/wvc.72511>,YSI by Bouslama & Schapaugh (1984)<doi:10.2135/cropsci1984.0011183X002400050026x>, Yield index by Gavuzzi et al.(1997)<doi:10.4141/P96-130>.

r-peruapis 0.1.0
Propagated dependencies: r-tibble@3.3.0 r-scales@1.4.0 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/lightbluetitan/peruapis
Licenses: Expat
Build system: r
Synopsis: Access Peruvian Data via Public APIs and Curated Datasets
Description:

This package provides functions to access data from public RESTful APIs including Nager.Date', World Bank API', and REST Countries API', retrieving real-time or historical data related to Peru, such as holidays, economic indicators, and international demographic and geopolitical indicators. Additionally, the package includes curated datasets focused on Peru, covering topics such as administrative divisions, electoral data, demographics, biodiversity and educational classifications. The package supports reproducible research and teaching by integrating reliable international APIs and structured datasets from public, academic, and government sources. For more information on the APIs, see: Nager.Date <https://date.nager.at/Api>, World Bank API <https://datahelpdesk.worldbank.org/knowledgebase/articles/889392>, and REST Countries API <https://restcountries.com/>.

r-portvine 1.0.3
Propagated dependencies: r-wdm@0.2.6 r-tidyr@1.3.1 r-rvinecopulib@0.7.3.1.0 r-rugarch@1.5-4 r-rlang@1.1.6 r-rcppthread@2.2.0 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-ppcor@1.1 r-kde1d@1.1.1 r-future-apply@1.20.0 r-dtplyr@1.3.2 r-dplyr@1.1.4 r-data-table@1.17.8 r-checkmate@2.3.3 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/EmanuelSommer/portvine
Licenses: Expat
Build system: r
Synopsis: Vine Based (Un)Conditional Portfolio Risk Measure Estimation
Description:

Following Sommer (2022) <https://mediatum.ub.tum.de/1658240> portfolio level risk estimates (e.g. Value at Risk, Expected Shortfall) are estimated by modeling each asset univariately by an ARMA-GARCH model and then their cross dependence via a Vine Copula model in a rolling window fashion. One can even condition on variables/time series at certain quantile levels to stress test the risk measure estimates.

r-palmtree 0.9-1
Propagated dependencies: r-partykit@1.2-24 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=palmtree
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Partially Additive (Generalized) Linear Model Trees
Description:

This is an implementation of model-based trees with global model parameters (PALM trees). The PALM tree algorithm is an extension to the MOB algorithm (implemented in the partykit package), where some parameters are fixed across all groups. Details about the method can be found in Seibold, Hothorn, Zeileis (2016) <arXiv:1612.07498>. The package offers coef(), logLik(), plot(), and predict() functions for PALM trees.

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