_            _    _        _         _
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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-pseudocure 1.0.0
Propagated dependencies: r-rlang@1.1.6 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-mass@7.3-65 r-ggpubr@0.6.2 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pseudoCure
Licenses: GPL 2+
Build system: r
Synopsis: Pseudo-Observations Approach for Analyzing Survival Data with a Cure Fraction
Description:

This package provides a collection of easy-to-use tools for regression analysis of survival data with a cure fraction proposed in Su et al. (2022) <doi:10.1177/09622802221108579>. The modeling framework is based on the Cox proportional hazards mixture cure model and the bounded cumulative hazard (promotion time cure) model. The pseudo-observations approach is utilized to assess covariate effects and embedded in the variable selection procedure.

r-plinkqc 1.0.1
Dependencies: plink@1.07
Propagated dependencies: r-upsetr@1.4.0 r-tidyr@1.3.1 r-sys@3.4.3 r-randomforest@4.7-1.2 r-r-utils@2.13.0 r-optparse@1.7.5 r-igraph@2.2.1 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-data-table@1.17.8 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://meyer-lab-cshl.github.io/plinkQC/
Licenses: Expat
Build system: r
Synopsis: Genotype Quality Control with 'PLINK'
Description:

Genotyping arrays enable the direct measurement of an individuals genotype at thousands of markers. plinkQC facilitates genotype quality control for genetic association studies as described by Anderson and colleagues (2010) <doi:10.1038/nprot.2010.116>. It makes PLINK basic statistics (e.g. missing genotyping rates per individual, allele frequencies per genetic marker) and relationship functions accessible from R and generates a per-individual and per-marker quality control report. Individuals and markers that fail the quality control can subsequently be removed to generate a new, clean dataset. Removal of individuals based on relationship status is optimised to retain as many individuals as possible in the study. Additionally, there is a trained classifier to predict genomic ancestry of human samples.

r-pampal 1.5.2
Propagated dependencies: r-xml2@1.5.0 r-tuner@1.4.7 r-tidyr@1.3.1 r-signal@1.8-1 r-shiny@1.11.1 r-seewave@2.2.4 r-rsqlite@2.4.4 r-rlang@1.1.6 r-reticulate@1.44.1 r-purrr@1.2.0 r-pammisc@1.12.7 r-pambinaries@1.9.3 r-lubridate@1.9.4 r-knitr@1.50 r-ggplot2@4.0.1 r-geosphere@1.5-20 r-gam@1.22-6 r-future-apply@1.20.0 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PAMpal
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Load and Process Passive Acoustic Data
Description:

This package provides tools for loading and processing passive acoustic data. Read in data that has been processed in Pamguard (<https://www.pamguard.org/>), apply a suite processing functions, and export data for reports or external modeling tools. Parameter calculations implement methods by Oswald et al (2007) <doi:10.1121/1.2743157>, Griffiths et al (2020) <doi:10.1121/10.0001229> and Baumann-Pickering et al (2010) <doi:10.1121/1.3479549>.

r-psymetadata 1.0.1
Propagated dependencies: r-rdpack@2.6.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=psymetadata
Licenses: GPL 2+
Build system: r
Synopsis: Open Datasets from Meta-Analyses in Psychology Research
Description:

Data and examples from meta-analyses in psychology research.

r-photogea 1.4.0
Propagated dependencies: r-openxlsx@4.2.8.1 r-lattice@0.22-7 r-dfoptim@2023.1.0 r-deoptim@2.2-8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/eloch216/PhotoGEA
Licenses: Expat
Build system: r
Synopsis: Photosynthetic Gas Exchange Analysis
Description:

Read, process, fit, and analyze photosynthetic gas exchange measurements. Documentation is provided by several vignettes; also see Lochocki, Salesse-Smith, & McGrath (2025) <doi:10.1111/pce.15501>.

r-pcamixdata 3.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PCAmixdata
Licenses: GPL 2+
Build system: r
Synopsis: Multivariate Analysis of Mixed Data
Description:

This package implements principal component analysis, orthogonal rotation and multiple factor analysis for a mixture of quantitative and qualitative variables.

r-polyglotr 1.7.1
Propagated dependencies: r-urltools@1.7.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rvest@1.0.5 r-rlang@1.1.6 r-rcurl@1.98-1.17 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/Tomeriko96/polyglotr/
Licenses: Expat
Build system: r
Synopsis: Translate Text
Description:

Provide easy methods to translate pieces of text. Functions send requests to translation services online.

r-prevtoinc 0.12.0
Propagated dependencies: r-tibble@3.3.0 r-rlang@1.1.6 r-purrr@1.2.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=prevtoinc
Licenses: Expat
Build system: r
Synopsis: Prevalence to Incidence Calculations for Point-Prevalence Studies in a Nosocomial Setting
Description:

This package provides functions to simulate point prevalence studies (PPSs) of healthcare-associated infections (HAIs) and to convert prevalence to incidence in steady state setups. Companion package to the preprint Willrich et al., From prevalence to incidence - a new approach in the hospital setting; <doi:10.1101/554725> , where methods are explained in detail.

r-powerhe 1.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=powerHE
Licenses: GPL 2+
Build system: r
Synopsis: Power and Sample Size Calculations with Hierarchical Endpoints
Description:

Calculate sample size or power for hierarchical endpoints. The package can handle any type of outcomes (binary, continuous, count, ordinal, time-to-event) and any number of such endpoints. It allows users to calculate sample size with a given power or to calculate power with a given sample size for hypothesis testing based on win ratios, win odds, net benefit, or DOOR (desirability of outcome ranking) as treatment effect between two groups for hierarchical endpoints. The methods of this package are described further in the paper by Barnhart, H. X. et al. (2024, <doi:10.1080/19466315.2024.2365629>).

r-purge 0.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=purge
Licenses: Expat
Build system: r
Synopsis: Purge Training Data from Models
Description:

Enables the removal of training data from fitted R models while retaining predict functionality. The purged models are more portable as their memory footprints do not scale with the training sample size.

r-promptr 1.0.0
Propagated dependencies: r-stringr@1.6.0 r-jsonlite@2.0.0 r-httr2@1.2.1 r-glue@1.8.0 r-dplyr@1.1.4 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/joeornstein/promptr
Licenses: Expat
Build system: r
Synopsis: Format and Complete Few-Shot LLM Prompts
Description:

Format and submit few-shot prompts to OpenAI's Large Language Models (LLMs). Designed to be particularly useful for text classification problems in the social sciences. Methods are described in Ornstein, Blasingame, and Truscott (2024) <https://joeornstein.github.io/publications/ornstein-blasingame-truscott.pdf>.

r-prosgpv 1.0.0
Propagated dependencies: r-survival@3.8-3 r-mass@7.3-65 r-glmnet@4.1-10 r-brglm2@1.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/zuoyi93/ProSGPV
Licenses: GPL 3
Build system: r
Synopsis: Penalized Regression with Second-Generation P-Values
Description:

Implementation of penalized regression with second-generation p-values for variable selection. The algorithm can handle linear regression, GLM, and Cox regression. S3 methods print(), summary(), coef(), predict(), and plot() are available for the algorithm. Technical details can be found at Zuo et al. (2021) <doi:10.1080/00031305.2021.1946150>.

r-pkgfilecache 0.1.5
Propagated dependencies: r-rappdirs@0.3.3 r-downloader@0.4.1 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/dfsp-spirit/pkgfilecache
Licenses: Expat
Build system: r
Synopsis: Download and Manage Optional Package Data
Description:

Manage optional data for your package. The data can be hosted anywhere, and you have to give a Uniform Resource Locator (URL) for each file. File integrity checks are supported. This is useful for package authors who need to ship more than the 5 Megabyte of data currently allowed by the the Comprehensive R Archive Network (CRAN).

r-phsmm 1.0
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PHSMM
Licenses: GPL 3
Build system: r
Synopsis: Penalised Maximum Likelihood Estimation for Hidden Semi-Markov Models
Description:

This package provides tools for penalised maximum likelihood estimation of hidden semi-Markov models (HSMMs) with flexible state dwell-time distributions. These include functions for model fitting, model checking and state-decoding. The package considers HSMMs for univariate time series with state-dependent gamma, normal, Poisson or Bernoulli distributions. For details, see Pohle, J., Adam, T. and Beumer, L.T. (2021): Flexible estimation of the state dwell-time distribution in hidden semi-Markov models. <arXiv:2101.09197>.

r-ppmf 0.2.1
Propagated dependencies: r-zip@2.3.3 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-readr@2.1.6 r-dplyr@1.1.4 r-censable@0.0.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/christopherkenny/ppmf/
Licenses: Expat
Build system: r
Synopsis: Read Census Privacy Protected Microdata Files
Description:

This package implements data processing described in <doi:10.1126/sciadv.abk3283> to align modern differentially private data with formatting of older US Census data releases. The primary goal is to read in Census Privacy Protected Microdata Files data in a reproducible way. This includes tools for aggregating to relevant levels of geography by creating geographic identifiers which match the US Census Bureau's numbering. Additionally, there are tools for grouping race numeric identifiers into categories, consistent with OMB (Office of Management and Budget) classifications. Functions exist for downloading and linking to existing sources of privacy protected microdata.

r-predictioninterval 1.0.0
Propagated dependencies: r-pbapply@1.7-4 r-mbess@4.9.41 r-mass@7.3-65 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=predictionInterval
Licenses: FSDG-compatible
Build system: r
Synopsis: Prediction Interval Functions for Assessing Replication Study Results
Description:

This package provides a common problem faced by journal reviewers and authors is the question of whether the results of a replication study are consistent with the original published study. One solution to this problem is to examine the effect size from the original study and generate the range of effect sizes that could reasonably be obtained (due to random sampling) in a replication attempt (i.e., calculate a prediction interval). This package has functions that calculate the prediction interval for the correlation (i.e., r), standardized mean difference (i.e., d-value), and mean.

r-powerpkg 1.6
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=powerpkg
Licenses: GPL 2+
Build system: r
Synopsis: Power Analyses for the Affected Sib Pair and the TDT Design
Description:

There are two main functions: (1) To estimate the power of testing for linkage using an affected sib pair design, as a function of the recurrence risk ratios. We will use analytical power formulae as implemented in R. These are based on a Mathematica notebook created by Martin Farrall. (2) To examine how the power of the transmission disequilibrium test (TDT) depends on the disease allele frequency, the marker allele frequency, the strength of the linkage disequilibrium, and the magnitude of the genetic effect. We will use an R program that implements the power formulae of Abel and Muller-Myhsok (1998). These formulae allow one to quickly compute power of the TDT approach under a variety of different conditions. This R program was modeled on Martin Farrall's Mathematica notebook.

r-penaltylearning 2024.9.3
Propagated dependencies: r-ggplot2@4.0.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/tdhock/penaltyLearning
Licenses: GPL 3
Build system: r
Synopsis: Penalty Learning
Description:

Implementations of algorithms from Learning Sparse Penalties for Change-point Detection using Max Margin Interval Regression, by Hocking, Rigaill, Vert, Bach <http://proceedings.mlr.press/v28/hocking13.html> published in proceedings of ICML2013.

r-pdfminer 1.0
Dependencies: python-pandas@2.2.3
Propagated dependencies: r-jsonlite@2.0.0 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pdfminer
Licenses: Expat
Build system: r
Synopsis: Read Portable Document Format (PDF) Files
Description:

This package provides an interface to PDFMiner <https://github.com/pdfminer/pdfminer.six> a Python package for extracting information from PDF'-files. PDFMiner has the goal to get all information available in a PDF'-file, position of the characters, font type, font size and informations about lines. Which makes it the perfect starting point for extracting tables from PDF'-files. More information can be found in the package README'-file.

r-palmr 0.2.0
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://palmr.ly.gd.edu.kg/
Licenses: FSDG-compatible
Build system: r
Synopsis: Interface for 'Google Pathways Language Model 2 (PaLM 2)'
Description:

Google Pathways Language Model 2 (PaLM 2) as a coding and writing assistant designed for R'. With a range of functions, including natural language processing and coding optimization, to assist R developers in simplifying tedious coding tasks and content searching.

r-pandoc 0.2.0
Propagated dependencies: r-rlang@1.1.6 r-rappdirs@0.3.3 r-fs@1.6.6
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/cderv/pandoc
Licenses: Expat
Build system: r
Synopsis: Manage and Run Universal Converter 'Pandoc' from 'R'
Description:

This package provides a set of tools to install, manage and run several Pandoc versions.

r-packer 0.1.3
Propagated dependencies: r-usethis@3.2.1 r-rstudioapi@0.17.1 r-rprojroot@2.1.1 r-roxygen2@7.3.3 r-jsonlite@2.0.0 r-htmlwidgets@1.6.4 r-fs@1.6.6 r-cli@3.6.5 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/JohnCoene/packer
Licenses: Expat
Build system: r
Synopsis: An Opinionated Framework for Using 'JavaScript'
Description:

Enforces good practice and provides convenience functions to make work with JavaScript not just easier but also scalable. It is a robust wrapper to NPM', yarn', and webpack that enables to compartmentalize JavaScript code, leverage NPM and yarn packages, include TypeScript', React', or Vue in web applications, and much more.

r-power2stage 0.5-4
Propagated dependencies: r-powertost@1.5-7 r-mvtnorm@1.3-3 r-cubature@2.1.4-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/Detlew/Power2Stage
Licenses: GPL 2+
Build system: r
Synopsis: Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
Description:

This package contains functions to obtain the operational characteristics of bioequivalence studies in Two-Stage Designs (TSD) via simulations.

r-plotannotate 1.4-0
Propagated dependencies: r-conicfit@1.0.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=plotannotate
Licenses: GPL 3
Build system: r
Synopsis: Annotate Plots
Description:

Interactively annotate base R graphics plots with freehand drawing, symbols (points, lines, arrows, rectangles, circles, ellipses), and text. This is useful for teaching, for example to visually explain certain plot elements, and creating quick sketches.

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Total results: 69112