_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-plu 0.3.0
Propagated dependencies: r-lifecycle@1.0.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://pkg.rossellhayes.com/plu/
Licenses: Expat
Build system: r
Synopsis: Dynamically Pluralize Phrases
Description:

Converts English phrases to singular or plural form based on the length of an associated vector. Contains helper functions to create natural language lists from vectors and to include the length of a vector in natural language.

r-proliferativeindex 1.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=ProliferativeIndex
Licenses: Expat
Build system: r
Synopsis: Calculates and Analyzes the Proliferative Index
Description:

This package provides functions for calculating and analyzing the proliferative index (PI) from an RNA-seq dataset. As described in Ramaker & Lasseigne, et al. bioRxiv, 2016 <doi:10.1101/063057>.

r-ptm 1.0.1
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7 r-curl@7.0.0 r-bio3d@2.4-5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://bitbucket.org/jcaledo/ptm
Licenses: GPL 2+
Build system: r
Synopsis: Analyses of Protein Post-Translational Modifications
Description:

This package contains utilities for the analysis of post-translational modifications (PTMs) in proteins, with particular emphasis on the sulfoxidation of methionine residues. Features include the ability to download, filter and analyze data from the sulfoxidation database MetOSite'. Utilities to search and characterize S-aromatic motifs in proteins are also provided. In addition, functions to analyze sequence environments around modifiable residues in proteins can be found. For instance, ptm allows to search for amino acids either overrepresented or avoided around the modifiable residues from the proteins of interest. Functions tailored to test statistical hypothesis related to these differential sequence environments are also implemented. Further and detailed information regarding the methods in this package can be found in (Aledo (2020) <https://metositeptm.com>).

r-processpredictr 0.1.1
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tensorflow@2.20.0 r-stringr@1.6.0 r-rlang@1.1.6 r-reticulate@1.44.1 r-purrr@1.2.0 r-plotly@4.11.0 r-mltools@0.3.5 r-magrittr@2.0.4 r-keras@2.16.1 r-glue@1.8.0 r-ggplot2@4.0.1 r-forcats@1.0.1 r-eventdatar@0.3.1 r-edear@1.0.0 r-dplyr@1.1.4 r-data-table@1.17.8 r-cli@3.6.5 r-bupar@1.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=processpredictR
Licenses: Expat
Build system: r
Synopsis: Process Prediction
Description:

Means to predict process flow, such as process outcome, next activity, next time, remaining time, and remaining trace. Off-the-shelf predictive models based on the concept of Transformers are provided, as well as multiple way to customize the models. This package is partly based on work described in Zaharah A. Bukhsh, Aaqib Saeed, & Remco M. Dijkman. (2021). "ProcessTransformer: Predictive Business Process Monitoring with Transformer Network" <doi:10.48550/arXiv.2104.00721>.

r-pharmaverseadam 1.3.0
Propagated dependencies: r-tibble@3.3.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://pharmaverse.github.io/pharmaverseadam/
Licenses: FSDG-compatible
Build system: r
Synopsis: ADaM Test Data for the 'Pharmaverse' Family of Packages
Description:

This package provides a set of Analysis Data Model (ADaM) datasets constructed using the Study Data Tabulation Model (SDTM) datasets contained in the pharmaversesdtm package and the template scripts from the admiral family of packages. ADaM dataset specifications are described in the CDISC ADaM implementation guide, accessible by creating a free account on <https://www.cdisc.org/>.

r-peip 2.2-5
Propagated dependencies: r-rseis@4.2-4 r-pracma@2.4.6 r-matrix@1.7-4 r-geigen@2.3 r-fields@17.1 r-bvls@1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PEIP
Licenses: GPL 2+
Build system: r
Synopsis: Geophysical Inverse Theory and Optimization
Description:

Several functions introduced in Aster et al.'s book on inverse theory. The functions are often translations of MATLAB code developed by the authors to illustrate concepts of inverse theory as applied to geophysics. Generalized inversion, tomographic inversion algorithms (conjugate gradients, ART and SIRT'), non-linear least squares, first and second order Tikhonov regularization, roughness constraints, and procedures for estimating smoothing parameters are included.

r-plotbivinvgaus 0.1.0
Propagated dependencies: r-plotly@4.11.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PlotBivInvGaus
Licenses: GPL 2
Build system: r
Synopsis: Density Contour Plot for Bivariate Inverse Gaussian Distribution
Description:

Create the density contour plot for bivariate inverse Gaussian distribution for given non negative random variables.

r-polykde 1.1.7
Propagated dependencies: r-sphunif@1.4.3 r-rotasym@1.2.0 r-rcppprogress@0.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-progressr@0.18.0 r-movmf@0.2-10 r-gsl@2.1-9 r-future@1.68.0 r-foreach@1.5.2 r-dofuture@1.1.2 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/egarpor/polykde
Licenses: GPL 3
Build system: r
Synopsis: Polyspherical Kernel Density Estimation
Description:

Kernel density estimation on the polysphere, (hyper)sphere, and circle. Includes functions for density estimation, regression estimation, ridge estimation, bandwidth selection, kernels, samplers, and homogeneity tests. Companion package to Garcà a-Portugués and Meilán-Vila (2025) <doi:10.1080/01621459.2025.2521898> and Garcà a-Portugués and Meilán-Vila (2023) <doi:10.1007/978-3-031-32729-2_4>.

r-pedigree 1.4.2
Propagated dependencies: r-reshape@0.8.10 r-matrix@1.7-4 r-haplosim@1.8.4.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pedigree
Licenses: GPL 2+
Build system: r
Synopsis: Pedigree Functions
Description:

Pedigree related functions.

r-pcsteiner 1.0.0.1
Propagated dependencies: r-igraph@2.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/krashkov/pcSteiner
Licenses: GPL 3
Build system: r
Synopsis: Convenient Tool for Solving the Prize-Collecting Steiner Tree Problem
Description:

The Prize-Collecting Steiner Tree problem asks to find a subgraph connecting a given set of vertices with the most expensive nodes and least expensive edges. Since it is proven to be NP-hard, exact and efficient algorithm does not exist. This package provides convenient functionality for obtaining an approximate solution to this problem using loopy belief propagation algorithm.

r-pgmm 1.2.8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pgmm
Licenses: GPL 2+
Build system: r
Synopsis: Parsimonious Gaussian Mixture Models
Description:

Carries out model-based clustering or classification using parsimonious Gaussian mixture models. McNicholas and Murphy (2008) <doi:10.1007/s11222-008-9056-0>, McNicholas (2010) <doi:10.1016/j.jspi.2009.11.006>, McNicholas and Murphy (2010) <doi:10.1093/bioinformatics/btq498>, McNicholas et al. (2010) <doi:10.1016/j.csda.2009.02.011>.

r-phymapnet 0.1.2
Propagated dependencies: r-gunifrac@1.9 r-compositions@2.0-9 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=phymapnet
Licenses: GPL 3
Build system: r
Synopsis: Phylogeny-Guided Bayesian Microbial Network Inference
Description:

This package implements a phylogeny-aware Bayesian graphical modeling framework for microbial network inference using a shrinkage precision estimator guided by a phylogenetic kernel, with optional hyperparameter-ensemble edge reliability analysis.

r-pl94171 1.2.1
Propagated dependencies: r-withr@3.0.2 r-tinytiger@0.0.11 r-stringr@1.6.0 r-sf@1.0-23 r-readr@2.1.6 r-foreign@0.8-90 r-dplyr@1.1.4 r-curl@7.0.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://corymccartan.com/PL94171/
Licenses: Expat
Build system: r
Synopsis: Tabulate P.L. 94-171 Redistricting Data Summary Files
Description:

This package provides tools to process legacy format summary redistricting data files produced by the United States Census Bureau pursuant to P.L. 94-171. These files are generally available earlier but are difficult to work with as-is.

r-pid 0.65
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://learnche.org/pid/
Licenses: FreeBSD
Build system: r
Synopsis: Process Improvement using Data
Description:

This package provides a collection of scripts and data files for the statistics text: "Process Improvement using Data" <https://learnche.org/pid/> and the online course "Experimentation for Improvement" found on Coursera. The package contains code for designed experiments, data sets and other convenience functions used in the book.

r-purging 1.0.0
Propagated dependencies: r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=purging
Licenses: Expat
Build system: r
Synopsis: Simple Method for Purging Mediation Effects among Independent Variables
Description:

Simple method of purging independent variables of mediating effects. First, regress the direct variable on the indirect variable. Then, used the stored residuals as the new purged (direct) variable in the updated specification. This purging process allows for use of a new direct variable uncorrelated with the indirect variable. Please cite the method and/or package using Waggoner, Philip D. (2018) <doi:10.1177/1532673X18759644>.

r-pimeta 1.1.3
Propagated dependencies: r-scales@1.4.0 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pimeta
Licenses: GPL 3
Build system: r
Synopsis: Prediction Intervals for Random-Effects Meta-Analysis
Description:

An implementation of prediction intervals for random-effects meta-analysis: Higgins et al. (2009) <doi:10.1111/j.1467-985X.2008.00552.x>, Partlett and Riley (2017) <doi:10.1002/sim.7140>, and Nagashima et al. (2019) <doi:10.1177/0962280218773520>, <arXiv:1804.01054>.

r-pcsinr 0.1.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/felixhenninger/PCSinR
Licenses: GPL 3+
Build system: r
Synopsis: Parallel Constraint Satisfaction Networks in R
Description:

Parallel Constraint Satisfaction (PCS) models are an increasingly common class of models in Psychology, with applications to reading and word recognition (McClelland & Rumelhart, 1981), judgment and decision making (Glöckner & Betsch, 2008; Glöckner, Hilbig, & Jekel, 2014), and several other fields (e.g. Read, Vanman, & Miller, 1997). In each of these fields, they provide a quantitative model of psychological phenomena, with precise predictions regarding choice probabilities, decision times, and often the degree of confidence. This package provides the necessary functions to create and simulate basic Parallel Constraint Satisfaction networks within R.

r-pepa 1.2
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://CRAN.R-project.org/package=pEPA
Licenses: GPL 3
Build system: r
Synopsis: Tests of Equal Predictive Accuracy for Panels of Forecasts
Description:

Allows to perform the tests of equal predictive accuracy for panels of forecasts. Main references: Qu et al. (2024) <doi:10.1016/j.ijforecast.2023.08.001> and Akgun et al. (2024) <doi:10.1016/j.ijforecast.2023.02.001>.

r-plumbr 0.6.10
Propagated dependencies: r-objectsignals@0.10.3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/ggobi/plumbr/wiki
Licenses: GPL 2+
Build system: r
Synopsis: Mutable and Dynamic Data Models
Description:

The base R data.frame, like any vector, is copied upon modification. This behavior is at odds with that of GUIs and interactive graphics. To rectify this, plumbr provides a mutable, dynamic tabular data model. Models may be chained together to form the complex plumbing necessary for sophisticated graphical interfaces. Also included is a general framework for linking datasets; an typical use case would be a linked brush.

r-pqtldata 0.5
Propagated dependencies: r-rdpack@2.6.4 r-knitr@1.50
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://jinghuazhao.github.io/pQTLdata/
Licenses: Expat
Build system: r
Synopsis: Collection of Proteome Panels and Meta-Data
Description:

It aggregates protein panel data and metadata for protein quantitative trait locus (pQTL) analysis using pQTLtools (<https://jinghuazhao.github.io/pQTLtools/>). The package includes data from affinity-based panels such as Olink (<https://olink.com/>) and SomaScan (<https://somalogic.com/>), as well as mass spectrometry-based panels from CellCarta (<https://cellcarta.com/>) and Seer (<https://seer.bio/>). The metadata encompasses updated annotations and publication details.

r-pxmake 0.19.0
Propagated dependencies: r-vctrs@0.6.5 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stringi@1.8.7 r-rlang@1.1.6 r-readxl@1.4.5 r-purrr@1.2.0 r-openxlsx@4.2.8.1 r-magrittr@2.0.4 r-furrr@0.3.1 r-dplyr@1.1.4 r-arrow@22.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/StatisticsGreenland/pxmake
Licenses: Expat
Build system: r
Synopsis: Make PX-Files in R
Description:

Create PX-files from scratch or read and modify existing ones. Includes a function for every PX keyword, making metadata manipulation simple and human-readable.

r-partimeroc 0.2.0
Propagated dependencies: r-vinecopula@2.6.1 r-survival@3.8-3 r-stanheaders@2.32.10 r-sn@2.1.1 r-rstantools@2.5.0 r-rstan@2.32.7 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-mvtnorm@1.3-3 r-moments@0.14.1 r-matrix@1.7-4 r-gofcens@1.5 r-flexsurv@2.3.2 r-desctools@0.99.60 r-cubature@2.1.4-1 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/FaizAzhar/parTimeROC
Licenses: Expat
Build system: r
Synopsis: Parametric Time-Dependent Receiver Operating Characteristic
Description:

Producing the time-dependent receiver operating characteristic (ROC) curve through parametric approaches. Tools for generating random data, fitting, predicting and check goodness of fit are prepared. The methods are developed from the theoretical framework of proportional hazard model and copula functions. Using this package, users can now simulate parametric time-dependent ROC and run experiment to understand the behavior of the curve under different scenario.

r-pplot 0.9
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pplot
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Chronological and Ordered p-Plots for Empirical Data
Description:

Generates chronological and ordered p-plots for data vectors or vectors of p-values. The p-plot visualizes the evolution of the p-value of a significance test across the sampled data. It allows for assessing the consistency of the observed effects, for detecting the presence of potential moderator variables, and for estimating the influence of outlier values on the observed results. For non-significant findings, it can diagnose patterns indicative of underpowered study designs. The p-plot can thus either back the binary accept-vs-reject decision of common null-hypothesis significance tests, or it can qualify this decision and stimulate additional empirical work to arrive at more robust and replicable statistical inferences.

r-plotscaper 0.2.8
Propagated dependencies: r-uuid@1.2-1 r-knitr@1.50 r-jsonlite@2.0.0 r-httpuv@1.6.16 r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://bartonicek.github.io/plotscaper/
Licenses: Expat
Build system: r
Synopsis: Explore Your Data with Interactive Figures
Description:

This package provides a framework for creating interactive figures for data exploration. All plots are automatically linked and support several kinds of interactive features, including selection, zooming, panning, and parameter manipulation. The figures can be interacted with either manually, using a mouse and a keyboard, or by running code from inside an active R session.

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Total results: 69112