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r-testthatmulti 0.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=testthatmulti
Licenses: GPL 3+
Synopsis: Testing for R Packages with Multiple Attempts for Noisy Tests
Description:

Runs tests using the testthat package but allows for multiple attempts for a single test. This is useful for noisy or flaky tests that generally pass but can fail due to occasional random errors, such as numeric instability or using random data.

r-optimparallel 1.0-2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/florafauna/optimParallel-R
Licenses: GPL 2+
Synopsis: Parallel version of the L-BFGS-B optimization method
Description:

This tool provides a parallel version of the L-BFGS-B method of optim(). The main function of the package is optimParallel(), which has the same usage and output as optim(). Using optimParallel() can significantly reduce the optimization time.

r-aws-signature 0.6.0
Propagated dependencies: r-base64enc@0.1-3 r-digest@0.6.37
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/cloudyr/aws.signature
Licenses: GPL 2+
Synopsis: Amazon Web Services Request Signatures
Description:

This package generates version 2 and 4 request signatures for Amazon Web Services (AWS) and provides a mechanism for retrieving credentials from environment variables, AWS credentials files, and EC2 instance metadata. For use on EC2 instances, the package 'aws.ec2metadata' is suggested.

r-knn-covertree 1.0
Propagated dependencies: r-matrix@1.7-3 r-rcpp@1.0.14 r-rcppeigen@0.3.4.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/flying-sheep/knn.covertree
Licenses: AGPL 3+
Synopsis: Accurate kNN Implementation with multiple distance measures
Description:

Similarly to the FNN package, this package allows calculation of the k nearest neighbors (kNN) of a data matrix. The implementation is based on cover trees introduced by Alina Beygelzimer, Sham Kakade, and John Langford (2006) doi:10.1145/1143844.1143857.

rust-avif-parse 1.3.2
Channel: guix
Location: gnu/packages/crates-graphics.scm (gnu packages crates-graphics)
Home page: https://github.com/kornelski/avif-parse
Licenses: MPL 2.0
Synopsis: Parser for AVIF image files
Description:

This AVIF parser allows extracting the AV1 payload and alpha channel metadata out of AVIF image files. The parser is a fork of Mozilla's MP4 parser used in Firefox, so it's designed to be robust and safely handle untrusted data.

rust-avif-parse 0.13.2
Channel: guix
Location: gnu/packages/crates-graphics.scm (gnu packages crates-graphics)
Home page: https://github.com/kornelski/avif-parse
Licenses: MPL 2.0
Synopsis: Parser for AVIF image files
Description:

This AVIF parser allows extracting the AV1 payload and alpha channel metadata out of AVIF image files. The parser is a fork of Mozilla's MP4 parser used in Firefox, so it's designed to be robust and safely handle untrusted data.

r-causalqueries 1.4.3
Propagated dependencies: r-stringr@1.5.1 r-stanheaders@2.32.10 r-rstantools@2.4.0 r-rstan@2.32.7 r-rlang@1.1.6 r-rcppeigen@0.3.4.0.2 r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14 r-lifecycle@1.0.4 r-latex2exp@0.9.6 r-knitr@1.50 r-ggraph@2.2.1 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-dirmult@0.1.3-5 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://integrated-inferences.github.io/CausalQueries/
Licenses: Expat
Synopsis: Make, Update, and Query Binary Causal Models
Description:

Users can declare causal models over binary nodes, update beliefs about causal types given data, and calculate arbitrary queries. Updating is implemented in stan'. See Humphreys and Jacobs, 2023, Integrated Inferences (<DOI: 10.1017/9781316718636>) and Pearl, 2009 Causality (<DOI:10.1017/CBO9780511803161>).

r-echarts2shiny 0.2.13
Propagated dependencies: r-shiny@1.10.0 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/XD-DENG/ECharts2Shiny
Licenses: GPL 2
Synopsis: Embedding Interactive Charts Generated with ECharts Library into Shiny Applications
Description:

Embed interactive charts to their Shiny applications. These charts will be generated by ECharts library developed by Baidu (<http://echarts.baidu.com/>). Current version supports line chart, bar chart, pie chart, scatter plot, gauge, word cloud, radar chart, tree map, and heat map.

r-gglinedensity 0.2.0
Propagated dependencies: r-vdiffr@1.0.8 r-vctrs@0.6.5 r-scales@1.4.0 r-rlang@1.1.6 r-lifecycle@1.0.4 r-ggplot2@3.5.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/hrryt/gglinedensity
Licenses: GPL 3+
Synopsis: Make DenseLines Heatmaps with 'ggplot2'
Description:

Visualise overlapping time series lines as a heatmap of line density. Provides a ggplot2 statistic implementing the DenseLines algorithm, which "normalizes time series by the arc length to compute accurate densities" (Moritz and Fisher, 2018) <doi:10.48550/arXiv.1808.06019>.

r-highlighthtml 0.2.5
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/lebebr01/highlightHTML
Licenses: Expat
Synopsis: Highlight HTML Text and Tables
Description:

This package provides a tool to format R markdown with CSS ids for HTML output. The tool may be most helpful for those using markdown to create reproducible documents. The biggest limitations in formatting is the knowledge of CSS by the document authors.

r-profileladder 0.1.3
Propagated dependencies: r-raw@0.1.8 r-chainladder@0.2.20
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=ProfileLadder
Licenses: GPL 2+
Synopsis: Functional Profile Chain Ladder for Claims Reserving
Description:

Functional claims reserving methods based on aggregated chain-ladder data, also known as the run-off triangle (functional) development profiles, implemented in three nonparametric algorithms (PARALLAX, REACT, and MACRAME) proposed in Maciak, Mizera, and Pešta (2022) <doi:10.1017/asb.2022.4>.

r-sanitytracker 0.1.0
Propagated dependencies: r-data-table@1.17.4 r-checkmate@2.3.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/MarselScheer/sanityTracker
Licenses: GPL 3
Synopsis: Keeps Track of all Performed Sanity Checks
Description:

During the preparation of data set(s) one usually performs some sanity checks. The idea is that irrespective of where the checks are performed, they are centralized by this package in order to list all at once with examples if a check failed.

r-tidygapminder 0.1.1
Propagated dependencies: r-tidyr@1.3.1 r-readxl@1.4.5 r-dplyr@1.1.4 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://ebedthan.github.io/tidygapminder
Licenses: GPL 2
Synopsis: Easily Tidy Gapminder Datasets
Description:

This package provides a toolset that allows you to easily import and tidy data sheets retrieved from Gapminder data web tools. It will therefore contribute to reduce the time used in data cleaning of Gapminder indicator data sheets as they are very messy.

r-violinplotter 3.0.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=violinplotter
Licenses: GPL 3
Synopsis: Plotting and Comparing Means with Violin Plots
Description:

This package produces violin plots with optional nonparametric (Mann-Whitney test) and parametric (Tukey's honest significant difference) mean comparison and linear regression. This package aims to be a simple and quick visualization tool for comparing means and assessing trends of categorical factors.

r-biocfilecache 2.16.0
Propagated dependencies: r-curl@6.2.3 r-dbi@1.2.3 r-dbplyr@2.5.0 r-dplyr@1.1.4 r-filelock@1.0.3 r-httr@1.4.7 r-rsqlite@2.3.11
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/BiocFileCache/
Licenses: Artistic License 2.0
Synopsis: Manage files across sessions
Description:

This package creates a persistent on-disk cache of files that the user can add, update, and retrieve. It is useful for managing resources (such as custom Txdb objects) that are costly or difficult to create, web resources, and data files used across sessions.

r-mlr3hyperband 0.6.0
Propagated dependencies: r-bbotk@1.5.0 r-checkmate@2.3.2 r-data-table@1.17.4 r-lgr@0.4.4 r-mlr3@0.23.0 r-mlr3misc@0.18.0 r-mlr3tuning@1.3.0 r-paradox@1.0.1 r-r6@2.6.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://mlr3hyperband.mlr-org.com
Licenses: LGPL 3
Synopsis: Hyperband for mlr3
Description:

This package implements a successive halving and hyperband optimization algorithm for the mlr3 ecosystem. The implementation in mlr3hyperband features improved scheduling and parallelizes the evaluation of configurations. The package includes tuners for hyperparameter optimization in mlr3tuning and optimizers for black-box optimization in bbotk.

r-alphavantager 0.1.3
Propagated dependencies: r-timetk@2.9.0 r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-readr@2.1.5 r-purrr@1.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-glue@1.8.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/business-science/alphavantager
Licenses: GPL 3+
Synopsis: Lightweight Interface to the Alpha Vantage API
Description:

Alpha Vantage has free historical financial information. All you need to do is get a free API key at <https://www.alphavantage.co>. Then you can use the R interface to retrieve free equity information. Refer to the Alpha Vantage website for more information.

r-extremebounds 0.1.7
Propagated dependencies: r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=ExtremeBounds
Licenses: GPL 2+
Synopsis: Extreme Bounds Analysis (EBA)
Description:

An implementation of Extreme Bounds Analysis (EBA), a global sensitivity analysis that examines the robustness of determinants in regression models. The package supports both Leamer's and Sala-i-Martin's versions of EBA, and allows users to customize all aspects of the analysis.

r-multilevelmod 1.0.0
Propagated dependencies: r-withr@3.0.2 r-tibble@3.2.1 r-rlang@1.1.6 r-purrr@1.0.4 r-parsnip@1.3.2 r-lme4@1.1-37 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/tidymodels/multilevelmod
Licenses: Expat
Synopsis: Model Wrappers for Multi-Level Models
Description:

Bindings for hierarchical regression models for use with the parsnip package. Models include longitudinal generalized linear models (Liang and Zeger, 1986) <doi:10.1093/biomet/73.1.13>, and mixed-effect models (Pinheiro and Bates) <doi:10.1007/978-1-4419-0318-1_1>.

r-optimaldesign 1.0.2.1
Propagated dependencies: r-rgl@1.3.18 r-quadprog@1.5-8 r-plyr@1.8.9 r-matrixstats@1.5.0 r-matrixcalc@1.0-6 r-matrix@1.7-3 r-lpsolve@5.6.23
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: http://www.iam.fmph.uniba.sk/design/
Licenses: GPL 3
Synopsis: Toolbox for Computing Efficient Designs of Experiments
Description:

Algorithms for D-, A-, I-, and c-optimal designs. Some of the functions in this package require the gurobi software and its accompanying R package. For their installation, please follow the instructions at <https://www.gurobi.com> and the file gurobi_inst.txt, respectively.

c-intro-and-ref 0.0.0-1.47e5a23
Channel: guix
Location: gnu/packages/c.scm (gnu packages c)
Home page: https://www.gnu.org/
Licenses: FDL 1.3+
Synopsis: GNU C Language Intro and Reference
Description:

This manual explains the C language for use with the GNU Compiler Collection (GCC) on the GNU/Linux system and other systems. We refer to this dialect as GNU C. If you already know C, you can use this as a reference manual.

r-anthropometry 1.19
Propagated dependencies: r-archetypes@2.2-0.2 r-biclust@2.0.3.1 r-cluster@2.1.8.1 r-ddalpha@1.3.16 r-fnn@1.1.4.1 r-icge@0.4.2 r-nnls@1.6 r-rgl@1.3.18 r-shapes@1.2.7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/Anthropometry/
Licenses: GPL 2+
Synopsis: Statistical methods for anthropometric data
Description:

This package provides statistical methods especially developed to analyze anthropometric data. These methods are aimed at providing effective solutions to some commons problems related to Ergonomics and Anthropometry. They are based on clustering, the statistical concept of data depth, statistical shape analysis and archetypal analysis.

r-seurat5object 5.1.0
Propagated dependencies: r-future@1.49.0 r-future-apply@1.11.3 r-generics@0.1.4 r-lifecycle@1.0.4 r-matrix@1.7-3 r-progressr@0.15.1 r-rcpp@1.0.14 r-rcppeigen@0.3.4.0.2 r-rlang@1.1.6 r-sp@2.2-0 r-spam@2.11-1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://satijalab.org/seurat
Licenses: GPL 3
Synopsis: Data structures for single cell data
Description:

This package defines S4 classes for single-cell genomic data and associated information, such as dimensionality reduction embeddings, nearest-neighbor graphs, and spatially-resolved coordinates. It provides data access methods and R-native hooks to ensure the Seurat object is familiar to other R users.

r-reactablefmtr 2.0.0
Propagated dependencies: r-webshot@0.5.5 r-tippy@0.1.0 r-stringr@1.5.1 r-shiny@1.10.0 r-sass@0.4.10 r-reactable@0.4.4 r-purrr@1.0.4 r-magrittr@2.0.3 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://kcuilla.github.io/reactablefmtr/
Licenses: Expat
Synopsis: Streamlined Table Styling and Formatting for Reactable
Description:

This package provides various features to streamline and enhance the styling of interactive reactable tables with easy-to-use and highly-customizable functions and themes. Apply conditional formatting to cells with data bars, color scales, color tiles, and icon sets. Utilize custom table themes inspired by popular websites such and bootstrap themes. Apply sparkline line & bar charts (note this feature requires the dataui package which can be downloaded from <https://github.com/timelyportfolio/dataui>). Increase the portability and reproducibility of reactable tables by embedding images from the web directly into cells. Save the final table output as a static image or interactive file.

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